ID U27809; SV 1; linear; genomic RNA; STD; VRL; 3057 BP.
XX
AC U27809;
XX
DT 06-JUL-1995 (Rel. 44, Created)
DT 12-DEC-2007 (Rel. 94, Last updated, Version 4)
XX
DE Peanut bud necrosis virus segment S non-structural protein and nucleocapsid
DE protein genes, complete cds.
XX
KW .
XX
OS Peanut bud necrosis virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RP 1-3057
RX PUBMED; 8629953.
RA Satyanarayana T., Mitchell S.E., Reddy D.V., Brown S., Kresovich S.,
RA Jarret R., Naidu R.A., Demski J.W.;
RT "Peanut bud necrosis tospovirus S RNA: complete nucleotide sequence, genome
RT organization and homology to other tospoviruses";
RL Arch. Virol. 141(1):85-98(1996).
XX
RN [2]
RP 1-3057
RA Mitchell S.E.;
RT ;
RL Submitted (26-MAY-1995) to the EMBL/GenBank/DDBJ databases.
RL Sharon Mitchell, PGRCU, USDA/ARS, University of Georgia Experiment Station,
RL Griffin, GA 30233, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3057
FT /organism="Peanut bud necrosis virus"
FT /segment="S"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:40687"
FT repeat_region 1. .10
FT /rpt_type=INVERTED
FT CDS 67. .1386
FT /codon_start=1
FT /product="non-structural protein"
FT /note="ORF1; NSs"
FT /db_xref="InterPro:IPR004915"
FT /db_xref="UniProtKB/TrEMBL:Q84402"
FT /protein_id="AAB04144.1"
FT /translation="MSTARSAASEFVKSYGTRDNRAINDCYSVFSGEGVNFLNLFMHNN
FT AGIKSAFSINDLGRNEDIKIHEAEVIDSCHDYHYFEKFGLDIIFCEHEMSLVVGKPGVK
FT NTGCKFTMHNQIFNPNSDTLALTPGTVSENEFYEKIKIRSNGLLPSGWYQDECCKNNFY
FT IATNGDLTLDYGFSVMGKTTSYWRESISREKILSVKQKCLPDNTVPTNRLLSTSTVKGI
FT QLGSELAPDTTVILSLKQNLNVDLKSQYRVSFHGIQEEGAFARTFCVPFENKSRMICLY
FT AKTVVDNSNERTTLIIKVVTKTIESHLVIPIRNHINCVKKIGARIGLVDSIESDPNYNQ
FT MIVKELLGVHTQFAINLSLVIKKPIIVFKMYDIELNNNHIDVYGRILNYQTDAEGNAYF
FT LSKTLEVLPKSLSTLSYLGSIAPIQWEESLEHQHFIVKPE"
FT misc_feature 883. .891
FT /note="encodes potential N-glycosylation site"
FT misc_feature 1132. .1140
FT /note="encodes potential N-glycosylation site"
FT misc_feature 1387. .2159
FT /note="intergenic region"
FT misc_feature 1590. .1924
FT /note="hairpin region"
FT CDS complement(2160. .2990)
FT /codon_start=1
FT /product="nucleocapsid protein"
FT /note="ORF2"
FT /db_xref="GOA:Q84403"
FT /db_xref="InterPro:IPR002517"
FT /db_xref="UniProtKB/TrEMBL:Q84403"
FT /protein_id="AAB04145.1"
FT /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDTNKN
FT LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
FT misc_feature 2424. .2432
FT /note="encodes potential N-glycosylation site"
FT repeat_region 3048. .3057
FT /rpt_type=INVERTED
XX
SQ Sequence 3057 BP; 1007 A; 544 C; 517 G; 989 T; 0 other;
u27809 Length: 3057 12-DEC-2007 Type: N Check: 5141 ..
1 agagcaatcg gggcatctaa taattctaga aaaacaacga tatactcaag
51 aaatactatt tcaggcatgt caaccgcaag gagtgctgct tctgaattcg
101 tcaaaagcta tggcacaaga gacaacagag caatcaatga ttgctattct
151 gtcttctctg gagaaggtgt caactttctc aatttgttca tgcataacaa
201 tgcaggtatt aaatctgcat tcagcatcaa cgatttgggc aggaatgagg
251 atatcaaaat ccatgaagct gaagttattg attcatgcca tgattatcat
301 tactttgaga agtttgggtt agacataata ttctgtgagc atgaaatgag
351 cctggttgtg gggaaaccag gtgtgaagaa tacaggctgc aaattcacaa
401 tgcacaacca aattttcaat cctaattctg atacacttgc tttaactcct
451 ggaacagtct cagaaaatga gttctatgaa aaaatcaaaa taagatcaaa
501 tggactactt ccctctggat ggtatcaaga tgaatgctgt aaaaacaact
551 tttacatagc tacaaatgga gatttgactc ttgactacgg gttttctgtt
601 atgggaaaga caacatccta ttggagagaa agtatctcta gggagaagat
651 tttgtctgtt aagcagaagt gtttacctga taacactgtc cctaccaaca
701 ggctcctatc tacatcaact gtaaaaggta ttcagctagg atctgaacta
751 gccccagaca ccacagtgat actatcactt aagcaaaatc tgaacgttga
801 cttaaaatct caataccgcg tttcgtttca tggcatccaa gaggaaggtg
851 cttttgcaag gactttctgt gttccttttg aaaacaaatc caggatgata
901 tgcctatacg caaaaactgt tgtggataac agtaatgaaa ggactactct
951 gattataaag gtagttacaa aaactattga atcccatcta gtcattccta
1001 tcaggaatca cataaattgt gtaaagaaaa ttggagccag gatagggctt
1051 gttgattcta ttgaaagtga tcctaactat aatcagatga ttgttaaaga
1101 gttattgggt gttcatactc aatttgctat caatttatcc ttggtcataa
1151 agaagccgat cattgtgttc aaaatgtatg atattgagtt gaacaacaat
1201 catatagacg tttatggaag gatcctgaat taccagacag atgcagaggg
1251 aaatgcctat ttcctttcaa aaacccttga agttcttccc aaatcacttt
1301 ccactctgag ttacttagga agcattgcac caattcaatg ggaggaatct
1351 ttggagcacc agcatttcat tgtgaagcca gagtaattca ggtttatgtc
1401 cttgttctac ttaagtttat tgtgtgcatg ttatttaata agcaactaat
1451 aagtgtttgc ttgtttaaag tatataagta ttttaagtat tacagtataa
1501 tgttatcaaa tataagttta tataaataaa ataagctaat actaataagt
1551 gtaagtttaa taatcgaata taaattaaat aaataaaaac ccataaaaat
1601 caaaaaacgg aaaaccaaaa agacctcgaa agaggcaatc ttggcttaac
1651 tgctttaatt aaactcattt atcaaaagtt ttttacacgg aattcatgtt
1701 tcatggaatt tgagatcttt cgagtatttt aatctcattt atcaacttac
1751 atgatttaat caacatgagg aactatactg aatttggatc ccttgagtcc
1801 tgtaaattaa tccgagctag ataatcaatt ccagaaataa agcaaatcta
1851 tgttcaagac cggccaatcg gttgcctccg aagaggtctt ttttggtttt
1901 ttgatttttt gatttttttg ggttttttgt tatttattta ttttacttat
1951 taattattat ttggtttatt tattatctta ctcttatatt tattttaaac
2001 acaaacacaa taacacaata agtaaagtaa catttaaatt taatacacaa
2051 tgtaaacaca taaagaactt ataaacacac aaaagagctt atattactta
2101 acaaccacac ataaacttag atacatatta acatgcataa acaccttata
2151 tgaaacaatt tacaattcca gcgaaggacc agcctttgaa ctcttcttct
2201 tagaatgttc accataatca tccattgaga gactggcact gaaagctttg
2251 tccatgtatt tgacttgttc atcatatttc ttgagtgaga tagagctggc
2301 tgttccaggg ttgctctcac tcaatagctt tacagctgat ttaaacattt
2351 cctctagttc atttttgaat tcaatctgtg aagcagaaag tactttggct
2401 actttgcaaa cctgttcata agtagaaaag ttcttaattc ctaatttctc
2451 tttcttcaca ttttgataat aagccagagg gaatataatt ggtgccagac
2501 ctgtcatgct agacaagaga ggtagaggac ctccaatgca gagcatcatc
2551 cttaaagcac atgtatcgaa agatgcaggg acatttaatc cataagctgc
2601 cactaatggt aattccatta ttttattgta catctcctgc ttagcagcat
2651 cattcttgct cttctcaacc atactagcca ttttggtcct gatgaaagct
2701 tctgtccttt tgaaggtcca gtcatctggc cctacatcag tatttgtagc
2751 aacaatagtt ttaccacaaa aaacatactt accactttta caagcagcaa
2801 agatctgctt cctgcacttc aaaatattca aacagtttgt aaaagttatt
2851 tcaagatttt tgttggtgtc atagaaagct ttaaagctaa atccgggagt
2901 ggaatcttct gtttcaattt caacatctgc agagccacca gccaaaagtt
2951 ctttgatttt cttctcggtg agttgcttga cgttagacat ggtgtttact
3001 ctggaaacgt ctagtatatt gactttgaat gaattttatt agcgcctcga
3051 ttgctct