!!NA_SEQUENCE 1.0
ID   AF171943   standard; RNA; VRL; 1311 BP.
XX
AC   AF171943;
XX
SV   AF171943.1
XX
DT   25-MAY-2000 (Rel. 63, Created)
DT   25-MAY-2000 (Rel. 63, Last updated, Version 1)
XX
DE   Pariacoto virus RNA2 capsid protein precursor alpha gene, complete cds.
XX
KW   .
XX
OS   Pariacoto virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Nodaviridae;
OC   Alphanodavirus.
XX
RN   [1]
RP   1-1311
RX   MEDLINE; 20261733.
RA   Johnson K.N., Zeddam J.L., Ball L.A.;
RT   "Characterization and construction of functional cDNA clones of pariacoto
RT   virus, the first Alphanodavirus isolated outside Australasia";
RL   J. Virol. 74(11):5123-5132(2000).
XX
RN   [2]
RP   1-1311
RA   Johnson K.N., Ball L.A.;
RT   ;
RL   Submitted (23-JUL-1999) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology, University of Alabama at Birmingham, 845 19th Street South,
RL   Birmingham, AL 35294, USA
XX
DR   SPTREMBL; Q9J7Z0; Q9J7Z0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1311
FT                   /chromosome="RNA2"
FT                   /country="Peru"
FT                   /db_xref="taxon:103782"
FT                   /organism="Pariacoto virus"
FT   CDS             23. .1228
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9J7Z0"
FT                   /product="capsid protein precursor alpha"
FT                   /protein_id="AAF71693.1"
FT                   /translation="MVSRTKNRRNKARKVVSRSTALVPMAPASQRTGPAPRKPRKRNQA
FT                   LVRNPRLTDAGLAFLKCAFAAPDFSVDPGKGIPDNFHGRTLAIKDCNTTSVVFTPNTDT
FT                   YIVVAPVPGFAYFRAEVAVGAQPTTFVGVPYPTYATNFGAGSQNGLPAVNNYSKFRYAS
FT                   MACGLYPTSNMMQFSGSVQVWRVDLNLSEAVNPAVTAITPAPGVFANFVDKRINGLRGI
FT                   RPLAPRDNYSGNFIDGAYTFAFDKSTDFEWCDFVRSLEFSESNVLGAATAMKLLAPGGG
FT                   TDTTLTGLGNVNTLVYKISTPTGAVNTAILRTWNCIELQPYTDSALFQFSGVSPPFDPL
FT                   ALECYHNLKMRFPVAVSSRENSKFWEGVLRVLNQISGTLSVIPGPVGTISAGVHQLTGM
FT                   YM"
FT   mat_peptide     23. .1105
FT                   /product="mature capsid protein beta"
FT   mat_peptide     1106. .1225
FT                   /product="mature capsid protein gamma"
XX
SQ   Sequence 1311 BP; 308 A; 351 C; 335 G; 317 T; 0 other;

  AF171943  Length: 1311  May 27, 2002 15:31  Type: N  Check: 6803  ..
       1  atgtacaggt ataacatcaa agatggtatc aagaactaag aatcgaagga
      51  acaaggcaag gaaggtcgtc agtcgcagta ccgctttagt gcccatggca
     101  ccagcgtcac agcgcactgg tccggccccg agaaagccgc gtaagcggaa
     151  ccaagcgctc gtgcgtaatc cacgtttgac agatgcaggt cttgcttttc
     201  tgaaatgtgc gtttgctgcc cctgatttta gtgtggatcc cggtaagggt
     251  attccggaca attttcatgg tcgcacactc gccattaagg attgcaacac
     301  cacgtcggtg gtgtttacac cgaacaccga cacgtacatc gtagtggccc
     351  ccgttccggg gttcgcgtat ttccgcgcag aggtcgcggt tggagcgcaa
     401  cccacaacgt tcgttggtgt gccctaccct acgtatgcca ctaacttcgg
     451  tgctggtagc caaaacgggc ttcctgctgt taacaactac agtaagttcc
     501  gttatgcgtc aatggcctgt gggctttacc ccacaagcaa tatgatgcag
     551  ttttcgggtt cagttcaagt gtggagagtt gacttgaacc tgagtgaggc
     601  tgtcaacccc gctgttactg cgattacccc tgcgccggga gtctttgcaa
     651  acttcgtcga taaacgtatc aatggcctga gaggcatccg ccccttggcg
     701  ccgcgagata actactctgg taactttatc gacggggctt acacctttgc
     751  ctttgataag tccaccgatt ttgagtggtg cgattttgtt cgctcgttgg
     801  agttctcaga atctaatgtt ctgggagcgg caacggcgat gaaactgcta
     851  gctcccggag gtggtactga tacaacgctc accggtttgg gtaacgtaaa
     901  cacattagtg tataagatat ccactccgac gggcgccgtg aacaccgcga
     951  ttctacggac ttggaattgc atcgagcttc agccttacac tgactcggcg
    1001  ctcttccaat tctcaggggt ctctccaccc ttcgaccctc tcgctcttga
    1051  gtgttatcac aacctcaaga tgcggtttcc agttgcagtc tcttcacggg
    1101  agaacagcaa gttctgggaa ggtgtcctca gagtgctgaa tcaaatttca
    1151  ggcacactgt cagtgatacc aggtccagtc gggactatta gtgcaggcgt
    1201  tcatcaacta acaggaatgt acatgtaaag gacccccgcc gccagacccg
    1251  ccgacaatcg cacgtcgtaa aactgcgcgc tcgaaagctc ataaaagaaa
    1301  caaccatggc c