ID AY706994; SV 1; linear; genomic RNA; STD; VRL; 6617 BP.
XX
AC AY706994;
XX
DT 01-SEP-2006 (Rel. 89, Created)
DT 26-OCT-2006 (Rel. 89, Last updated, Version 2)
XX
DE Grapevine rupestris vein feathering virus polyprotein gene, complete cds.
XX
KW .
XX
OS Grapevine rupestris vein feathering virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC Marafivirus.
XX
RN [1]
RP 1-6617
RA Rosa C., Zhang Y.-P., Rowhani A.K.;
RT "Grapevine rupestris vein feathering virus Californian isolate";
RL Unpublished.
XX
RN [2]
RP 1-6617
RA Rosa C., Zhang Y.-P., Rowhani A.K.;
RT ;
RL Submitted (06-AUG-2004) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, UC Davis, One Shields Avenue, Davis, CA 95616, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .6617
FT /organism="Grapevine rupestris vein feathering virus"
FT /specific_host="Vitis vinifera cultivar Cabernet"
FT /mol_type="genomic RNA"
FT /country="USA:California"
FT /virion
FT /db_xref="taxon:204933"
FT 5'UTR 1. .266
FT CDS 267. .6473
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="UniProtKB/TrEMBL:Q0IKR9"
FT /protein_id="AAW33732.1"
FT /translation="MAFPSNLSTVLPSHLYQRPAHALWFNPSSPQPFEVLPHMVPANFP
FT HLFRGIPTPLERSMPVRSLLGDFRPRRFRPTTLYGGAAPTGPLIHPPYQPPSDLSPVEI
FT TFVPAPQPGNPPPSGITRRFYRPALSGGGLKELVEILNPTVHRDTVCSPLVEAAAGPLR
FT DSLQLYPYDIPQEHAKFLQTCGIQASGYGYKTHPHPVHKTIEIHLLFEHWMGLCRQPSS
FT VLFMKPSKFSKLQARNNNFAELCNYSLVARDITRYPETSPTPPECSTWFMHDSIMYLSA
FT EEVAGCFQACPHLERLYASLIVPPESSFTDLSLNPSLYRYRFHGDQLIYRLEENPSHSY
FT QQPKAALKWLQTNSIQGNDIFLAITRLESWGPVHSLLITRGRPLVLTDDSLFFSSPDAV
FT EIPAASSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSA
FT AWDNLQHFVTETAHHRQRTTYYLFNSTLARLSHWCRCHKLAIATSLTPLASASILLTLG
FT GIDLLWKHSIKHLVVAHHYLVGSAPIHARLLPRSFVRQHYPRFSIALEPRVSAPVIRLP
FT FSQTIRLGFLTTLAHHIPSLKRGRPRLSTPALLKAAFCLGLVTPPLLLMIRSFVGPDSP
FT QSMSDAYNRYFHPSRWELSLERSPASVIPSPPAFLPSGTAPTPLEPRPADSPLEVPLVP
FT SPRLHPDSPPPAEKQPELSPCEAAPAAPVLDASSKKAEETPSGLDMSATTILEAKVPVP
FT VSRADEPPRPSDLLSASEPKEELLVSHTGTLTHTTPQPVSAAPEVEPLMIDASGAGPVD
FT SSSVLHPGSYLPFSGTFPTRLRVSSLSPAPYPSLDCLLVSVSGATGFPKESLWQSLCGI
FT LPDSQLDNDQVRTQGLSTDHFCALAFLHSLRCTFLTDAGQQEMGMEDATSIFTIRHTSG
FT SPGHFELVRSSARPLLNGARPAADIVEHMKRFKVDGKILPFCEAHSYTSHVGRAKNLIS
FT NMKNGFDGVLANIDPQHTNEARDRLLSLDGSLDIAKPRTVSLIHIAGFAGCGKSFPICQ
FT LLKTKPCRNYKIAVPTVELRNEWKDSLKSSPADRWRLGTWESSLLKSARIVVIDEVYKL
FT PRGYLDLAIHADSTAQLFIVLGDPLQGEYHSTNPNSSNARLASEIKHLQPYMDMYCLWS
FT HRIPRNVARFFRVKTTSQVEGTVTTSLVLAPGWKQLTNSMNAARTLNDCGFAATTIASS
FT QGSTYSHPACINLDKNSSQLSHAHSLVALTRSKVGIMFTGDLSRLNPGSSSNLLFSKFK
FT QGESVDLRSLFPFEFPCCPTITEPLSSRPKFCLGGAPWLAVNHLADKPLAPSDLPDLLV
FT PEAPVILGSGESNAPQVSTHFLPETRRPLHFDVASAVPEPAKPSGVDPLDLASITPVYP
FT GESFENLARTFLPASIGKRLRFRPSSAPYRITSKDEILGSLLFDAHCTAMLRSPSASVP
FT FDENLFAECIALNEFAQLSSKTQAIIMANRDRSDPDWRWSAVRIFAKTQHKVNDHSIFG
FT GWKACQTLALMHDAVVLLLGPVKKYQRIFDAADRPANIFVYAGHTPSEMANWCRANLKP
FT GERVANDYTSFDQSQHGEAVVFERKKMERLNIPSHLIDLHIHLKTNVSTQFGPLTCMRL
FT TGEPGTYDDNTDYNLAVLHLEYLVGSTPCMVSGDDSLLGREPPRNPIWQAVKPLLALRF
FT KKERTRYGEFCGYYVGCEGCIRSPMALFAKLMVCVDDGTIEEKMISYATEFSIGHSLGD
FT AFWNLLPIDAVPFQSAVFDFFCRHAPEDVKVMFKLGRVEVSLFSHLLSKLTWLSYSSYA
FT YLSSLQRRALRGKAVRQHFPGDSKEVTELQGELLHAFSMSSTPRKLTGGLLLPPSPSMS
FT NEAQQPASGRPSRDDHRSDRQPPLPLAPKVQESPALSLTIPFQWVALIIKSDSAAFTAD
FT LAASTTLKKLTDPFRSCEITQLEVVLMPTLNAFNNPVTLHCVWRVNSIQPASGDELLYY
FT GGQAITAGGPVSMNALATVPADLTRINPRIKSSVGYLDTPRLTGTTMKCATAQTLPLAY
FT VMIRGMVSVSGPMGIKL"
FT 3'UTR 6474. .6617
XX
SQ Sequence 6617 BP; 1264 A; 2418 C; 1386 G; 1549 T; 0 other;
ay706994 Length: 6617 26-OCT-2006 Type: N Check: 7426 ..
1 ctttgattct agctttcgct acactcaagt tctctcgggc gtccgttatc
51 ggtcccagaa gcgccgctcg gcagccctta acccccctgc tttgacgtga
101 gtccgcttcg gccaactcac ctctggcagt tccatcgttc cttctcgaac
151 gagccccccc cttttctcca gtcagcctgc ttctcactca gcacgctctc
201 tttcgccttt tgccctttcc cactccaaat ccgcactttt cttcccagct
251 caacccgcta gtctccatgg ccttcccaag caacctctcc accgttctcc
301 caagccacct ttaccagaga ccagcccacg ctctgtggtt caacccatca
351 agcccgcagc cattcgaggt tctccctcac atggttccgg ccaatttccc
401 ccacctcttc cgcggcattc ccaccccgct ggagcgctcc atgccggttc
451 gctcgcttct tggcgacttc cgacctcggc gcttccgccc caccactctc
501 tatggtggag ccgctccaac aggccctctc atccaccccc cctatcaacc
551 tccatcagat ctctctcctg ttgagatcac ttttgtcccg gctccccaac
601 ccggcaaccc tccaccctcg ggaatcaccc gccgcttcta ccgtcccgct
651 ctctccggcg gcggccttaa ggagctggtt gagattctca acccaaccgt
701 ccaccgcgac actgtttgct cacccctagt cgaggcagcg gccggccccc
751 tccgcgactc actgcagctc tacccctacg acattccgca ggaacatgcg
801 aaattcctcc agacctgcgg gatccaagct tcagggtacg gctacaagac
851 tcacccacac cctgtccaca agacgatcga aatccacttg ctttttgagc
901 actggatggg cctctgccgt cagccctcgt ctgttctctt catgaaaccc
951 tcgaagttct ccaaacttca ggctcgcaac aacaatttcg cggagctatg
1001 caattacagc cttgtcgccc gcgacatcac ccgttaccct gagacctctc
1051 ctacccctcc ggagtgtagc acctggttca tgcatgactc catcatgtac
1101 ctctccgctg aagaagtggc tggctgcttc caagcctgcc cccacctcga
1151 gagactttat gcctctctca tcgtccctcc ggagtcctcc ttcacagacc
1201 tctccctcaa cccctcgctc tacaggtacc gcttccacgg tgatcaactg
1251 atttaccggc tcgaggaaaa cccgtctcac agctaccaac agcccaaggc
1301 tgctctcaag tggctgcaaa ccaacagcat ccaagggaac gatatctttc
1351 tcgcaatcac tcgcctagag agttggggtc ccgttcacag cttgctgatc
1401 acccgaggtc gtcccctcgt cttgactgac gactccctct tcttctcctc
1451 tcccgacgcc gtggaaatcc ccgcagcttc ctccatccaa caaagcttgc
1501 gccatcggtt ggtgccttcc gccgtgtacc actccctgtt catatacgtc
1551 agggctgtcc gcactctccg gcaaaccgat ccccaaggct acgttcgcac
1601 tcagagcaac aagcctgagt atgcttgggt cacctccgcc gcttgggata
1651 acctgcagca ctttgtgacg gagaccgcgc atcaccgcca acgcaccact
1701 tactacctct tcaactccac gctcgctcgc ctcagccatt ggtgtcgctg
1751 ccacaaactc gcgattgcca cttcgctcac ccctctagcc tctgcttcca
1801 tcctcctcac tctcggaggg atcgacctgt tgtggaagca ctcgataaag
1851 cacctcgtcg tggcccacca ttatttggtc ggttcagctc ctatccacgc
1901 tcgcctgctc ccgcgatcct tcgtccgaca gcattacccg cgcttcagca
1951 tcgctctaga gccgcgcgtc tccgcccctg tcatccgcct cccattctca
2001 cagaccatcc gcctgggctt tctgaccact ctcgcccacc acatcccgag
2051 cttgaagcgc ggccggccga ggttgtccac tccagccctt ctcaaagctg
2101 ctttctgctt gggcttggtg accccgcccc ttttgctcat gattcgctct
2151 tttgtcgggc ccgactctcc acagagtatg agcgacgcct acaaccggta
2201 cttccaccca tcccgctggg aactctctct cgagcgttcg cctgccagcg
2251 tcatcccttc ccccccagcc ttcttgccat ccggcactgc tcccactcct
2301 ttggagccac gccccgccga ctccccgttg gaggtgcctc ttgtcccttc
2351 cccaagattg cacccagaca gccctcctcc tgccgagaag cagcctgagc
2401 tttcgccgtg cgaagccgct cctgctgcgc ctgttctcga tgccagctcc
2451 aagaaagctg aagagacccc ttctggtctt gatatgtctg ccaccaccat
2501 tctcgaagcc aaggtcccag ttccggtttc tcgcgctgat gagccccccc
2551 gtccctccga tcttctctcc gcctcagagc ccaaggaaga gctgctcgtc
2601 tcacacaccg gtacgctcac ccacaccact cctcagcccg tttccgccgc
2651 acccgaagtg gaaccattga tgatcgacgc ttctggagcc ggtcctgtcg
2701 attcctcctc agttcttcac cctggttcct accttccctt cagtggtacc
2751 ttccccactc gtcttcgcgt gagctctctt tccccagcgc cttacccctc
2801 ccttgactgc ctcctcgtct ctgtctccgg agcgactgga ttcccaaaag
2851 agtccctgtg gcagagcctc tgcggcatct tacccgactc ccagctcgac
2901 aatgatcaag ttcgcacgca agggctcagc accgaccact tctgcgctct
2951 cgcctttctc cactctctgc gctgcacctt cctcacagac gccggccagc
3001 aagaaatggg catggaggac gcgacttcca tcttcacgat tcgtcacacc
3051 tctggaagtc cagggcactt cgagctcgtt cgatcttccg ctcgcccact
3101 tctcaatgga gcccgcccag ccgccgacat cgttgagcac atgaagcggt
3151 tcaaagtcga cggaaaaatt ctgcccttct gcgaagccca ttcctacact
3201 tctcatgtgg gtcgagccaa gaacctcatt agcaacatga agaacgggtt
3251 cgatggtgtg ctcgccaaca tcgacccgca gcacacgaat gaggctcgcg
3301 accggctcct ttctctcgac ggctcgcttg atatcgccaa gccccgcact
3351 gtctctctca tccatatcgc ggggttcgcc ggctgcggaa aatctttccc
3401 catctgccag cttcttaaga caaagccctg ccgcaactac aagatcgcgg
3451 tgcccacagt tgaactccgc aatgagtgga aagactctct caaatcctcc
3501 cctgctgatc gctggagact cggaacctgg gagtcttccc tcctgaagtc
3551 tgctcggatc gtcgttatcg atgaagtcta caagcttccg agaggttatc
3601 ttgatttagc catccatgct gactcaaccg cgcagctttt cattgtcctc
3651 ggcgaccctc tccaaggtga gtaccactcc actaacccca actccagcaa
3701 cgctcgtctg gctagcgaga tcaagcatct ccagccctac atggacatgt
3751 actgcttgtg gtcccaccgc atcccccgca acgttgcccg cttcttccgc
3801 gtcaaaacga cgtctcaggt ggaaggcacc gttaccacct ctctggttct
3851 cgctcctggt tggaagcagc tcaccaattc aatgaacgct gctcgcactc
3901 tcaacgattg tggcttcgct gcgacaacca ttgcttcctc tcaaggttcc
3951 acctattcgc accccgcctg catcaatctc gataagaatt cgagccagtt
4001 gtctcacgcc cactctcttg tcgcccttac caggtccaaa gtgggcatca
4051 tgttcactgg agacctctcc cgcctcaacc ccggctcatc ctccaatctc
4101 ctcttctcaa agttcaagca aggggaaagc gtagatctgc gctctctgtt
4151 ccccttcgaa tttccttgct gccccaccat cactgagcct ctctccagtc
4201 ggcccaagtt ctgtttggga ggcgctcctt ggctcgccgt caatcacctt
4251 gctgacaaac cgctggcacc ttctgacctc cctgaccttt tagttcccga
4301 agccccagta atcctagggt ctggagagag caacgctcca caagtgagca
4351 ctcacttcct tcccgaaact cggcggccgt tgcatttcga tgttgcgtcc
4401 gcggttcctg agcccgccaa gccctcagga gtcgaccccc tcgacttggc
4451 ctcgatcacc ccggtttacc ccggggagtc tttcgagaac ttagctcgca
4501 ctttcctccc agcgtctatt ggcaagaggt tgcgcttccg cccgtcatct
4551 gctccctatc gcatcacctc taaggatgag atcctaggct ccctgctttt
4601 cgatgctcac tgcacggcca tgcttcgcag cccctctgct tccgtgccct
4651 ttgatgaaaa cctcttcgca gagtgcatcg cactcaatga gttcgcccaa
4701 ctgagcagca aaactcaagc aatcatcatg gccaatcgcg accgctccga
4751 tcctgactgg cggtggtcag ctgttcgaat cttcgccaaa acgcagcata
4801 aagtcaacga ccactccatc tttggaggct ggaaagcttg ccagactttg
4851 gcgctcatgc acgacgccgt agttcttctc ctcggccccg tcaagaagta
4901 ccagcgaatc ttcgacgcag cagaccggcc cgccaacatc tttgtctacg
4951 ccggccacac cccttccgaa atggcgaact ggtgccgcgc aaatctgaag
5001 cccggggaac gggtcgcaaa cgattacacc agtttcgacc aatcccaaca
5051 cggggaggcc gtcgtttttg aacgcaagaa gatggaacgt ctcaacatac
5101 catcacatct catcgatctc catatccatc tgaagaccaa cgtctccacc
5151 cagttcgggc ctctcacctg catgcgtttg accggagagc ctggaactta
5201 cgatgacaac accgattaca acttggccgt cctccatctc gagtatctcg
5251 tgggctccac tccttgcatg gtatccggcg acgactccct tcttggtcgt
5301 gagccccctc gtaaccccat ctggcaggca gtcaaacctc tcctagccct
5351 gcgcttcaag aaggaaagaa cccgctatgg cgagttctgc ggctactacg
5401 ttggttgtga gggttgcatt cgctccccca tggctctttt cgccaagctg
5451 atggtttgcg ttgatgatgg caccatcgag gaaaagatga tttcttatgc
5501 caccgaattc tccattggcc actccctcgg cgacgccttt tggaatctcc
5551 tccccatcga tgctgtccca ttccagtccg ccgtcttcga cttcttctgc
5601 cgccacgcgc ctgaggatgt caaagtcatg ttcaagttgg gtcgcgttga
5651 agtgtctctc ttctcccatc tgctctccaa gctcacttgg ctctcgtact
5701 cctcctatgc ctatttaagc tctcttcagc gtcgcgctct ccgcggaaaa
5751 gccgtccgcc agcatttccc cggcgattct aaggaggtca ctgagctaca
5801 aggtgaattg cttcatgcct tttcaatgtc atcaacacct cgcaagctca
5851 ccggcggtct tctgctccca ccatcgccct ccatgtccaa tgaagcccag
5901 cagcccgcat ccggtcgtcc ttctcgcgat gaccatcgtt ctgatcgtca
5951 gcctcctctt cctctcgcgc ccaaagtcca agagtcgccg gcgctctcac
6001 tcaccatccc cttccagtgg gttgctctca taattaagag cgactcagcc
6051 gccttcaccg ctgacctcgc cgcttctacc actcttaaga agctgacgga
6101 tcctttccgc agctgcgaaa tcacccagct ggaggtggtt ctcatgccga
6151 ctctcaacgc cttcaacaat cctgtcaccc tccactgcgt ctggagggtc
6201 aactccatcc agcctgcttc cggcgacgag ctgctatact atggcggtca
6251 agccatcacc gctggcggcc ctgtcagcat gaacgctcta gccaccgtgc
6301 cggccgacct gacccgcatc aacccccgca ttaagtcgtc cgtggggtac
6351 ctggacactc ctcgcctcac cggcaccacc atgaaatgcg cgactgcgca
6401 aactctcccc ctggcctatg tcatgattcg tggcatggtc agcgtctctg
6451 gcccaatggg cattaaactc tgaacccctc ttctcttctc ttctctctcc
6501 cctgctctcc cttgcaccgg caacggtaat caagaaaagg tccgcaaagt
6551 gaccttggtg tgcttttagt ttctgctaaa aaaaaaaaaa aaaaaaaaaa
6601 aaaaaaaaaa aaaaaaa