!!NA_SEQUENCE 1.0
ID   AY899802   standard; genomic RNA; VRL; 1468 BP.
XX
AC   AY899802;
XX
SV   AY899802.1
XX
DT   20-FEB-2005 (Rel. 82, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Citrus sudden death-associated virus replicase-associated polyprotein
DE   (RdRp) gene, partial cds.
XX
KW   .
XX
OS   Citrus sudden death-associated virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC   Marafivirus.
XX
RN   [1]
RP   1-1468
RA   Harakava R.;
RT   "Marafivirus present in plants with Citrus Sudden Death";
RL   Unpublished.
XX
RN   [2]
RP   1-1468
RA   Harakava R.;
RT   ;
RL   Submitted (20-JAN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Bioquimica Fitopatologica, Instituto Biologico, Av. Conselheiro Rodrigues
RL   Alves, 1252, Sao Paulo, SP 04014-002, Brazil
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1468
FT                   /country="Brazil"
FT                   /db_xref="taxon:312008"
FT                   /mol_type="genomic RNA"
FT                   /organism="Citrus sudden death-associated virus"
FT                   /isolate="Comendador Gomes"
FT   gene            <1. .1332
FT                   /gene="RdRp"
FT   CDS             <1. .1332
FT                   /codon_start=1
FT                   /db_xref="UniProt/TrEMBL:Q5EES4"
FT                   /gene="RdRp"
FT                   /product="replicase-associated polyprotein"
FT                   /protein_id="AAX07751.1"
FT                   /translation="EPGTYDDNSDYNLAVINCEYMAANTPTMVSGDDSLLDREPPTRPE
FT                   WVILQPLLSLRFKKERGRYATFCGYYASHVGCVRSPVALFAKLAIAVDDGSISDKMASY
FT                   LSEFALGHSLGDHLWEALPLEAVPFQSACFDFFCRRAPRHLKLSLMLGEVPESIIARIG
FT                   SSLKWASHAIYTTLSSAARVAILRSSRNSRSMPDDPDTTLLQGELLQHFQVPFMQSDTL
FT                   LPLTGGSSAPILTPEAFSTSLAFSMASDAQAGPAPSRDDRVDHQPRLPAAPRVAEVGLN
FT                   APSVNYPFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAF
FT                   SKPISVSAVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADLTRLNPVLKGP
FT                   VKYTDCPRFSYSVYSNGGTKGTNLCTIILRGVVRLSGPSGNLLA"
FT   mat_peptide     649. .1329
FT                   /gene="RdRp"
FT                   /product="capsid protein"
XX
SQ   Sequence 1468 BP; 274 A; 527 C; 308 G; 359 T; 0 other;

 AY899802  Length: 1468  April 26, 2005 08:33  Type: N  Check: 3758  ..
       1  gagccgggta cgtacgatga taactctgac tacaacctcg cggtgatcaa
      51  ctgcgagtac atggctgcca acactcccac catggtctca ggcgacgact
     101  ccctcttgga tcgtgagcct cccactcgcc ctgaatgggt catcctccag
     151  ccacttctca gcctccgctt caagaaagaa aggggtcggt acgccacctt
     201  ctgtggctat tacgcctctc atgtcggctg tgttcggtct cctgtggctc
     251  tctttgccaa gctggccata gctgtcgatg acggctccat ctctgacaaa
     301  atggcctcat acctctctga atttgctctt ggccactccc tcggcgacca
     351  cctttgggag gctttgcccc tcgaggccgt tcctttccag tccgcctgct
     401  ttgatttctt ctgccgccgg gcccccagac acctcaagct ttctctcatg
     451  ctcggcgagg tcccagaatc catcattgcc cgcatcgggt cctccttgaa
     501  gtgggcttct catgccatct acaccacact ctcatctgcc gcccgagtgg
     551  ccattctcag atcctcccgc aacagcagat ccatgccaga tgaccccgac
     601  accactctgc tacaaggtga attgcttcag cactttcaag taccattcat
     651  gcaatcagac actctcttgc ctctcaccgg tggttcctct gctcccatcc
     701  tcactccaga agccttctcc acctcccttg ccttctccat ggccagcgat
     751  gcccaagcag gtccagcccc cagtcgcgat gatcgcgttg accaccagcc
     801  tcgccttcct gctgctcctc gcgttgctga agttggtctc aatgccccgt
     851  cagtcaacta cccgttccag tgggtcgtcg cctcctacga cggatccgaa
     901  gccaagaacc tgagtgatga tctctccggc tccgccactc tcaccaaagt
     951  tatggccaac taccgacatg ctgagctcac atctgtcgag ctggaagttt
    1001  gccctcttgc tgcagctttc tccaagccca tctctgtgtc ggccgtctgg
    1051  accatcgcct ccatctctcc tgcttccgcc tctgagacct cctactacgg
    1101  tggtcgcctc ttcacagttg gcggtcctgt cctcatgtcc agcaccaccc
    1151  atctccctgc tgatctcacc cgcctcaatc cagtgctcaa aggccccgtc
    1201  aagtacacag actgccccag attctcctac tccgtctatt ccaacggcgg
    1251  aactaagggc accaatctct gcaccatcat cctccgggga gttgtccgcc
    1301  tcagcggccc ctccggtaat ctcctcgctt aggcgagcct cttcaggtga
    1351  aggaaaacac ctcctggtct cagccaggta atgatgctaa acctcccccg
    1401  ctcaagcagc aatgcctagg gttgccggtc gatccaaaga ccgttttctt
    1451  tattattatt aataaaaa