ID DQ339157; SV 1; linear; genomic RNA; STD; VRL; 4268 BP.
XX
AC DQ339157;
XX
DT 02-MAR-2006 (Rel. 87, Created)
DT 19-JUL-2006 (Rel. 88, Last updated, Version 2)
XX
DE Melon necrotic spot virus isolate MNSV-Al, complete genome.
XX
KW .
XX
OS Melon necrotic spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-4268
RA Genoves A., Navarro J.A., Pallas V.;
RT "Functional analysis of the five melon necrotic spot virus genome-encoded
RT proteins";
RL J. Gen. Virol. 87(8):2371-2380(2006).
XX
RN [2]
RP 1-4268
RA Navarro J.A., Pallas V.;
RT ;
RL Submitted (21-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL Biologia del Estres, Instituto de Biologia Molecular y Celular de Plantas
RL (UPV-CSIC), Avenida de los Naranjos, Valencia 46022, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .4268
FT /organism="Melon necrotic spot virus"
FT /isolate="MNSV-Al"
FT /mol_type="genomic RNA"
FT /country="Spain:Almeria"
FT /db_xref="taxon:11987"
FT CDS 89. .2464
FT /codon_start=1
FT /transl_except=(pos:893. .895,aa:OTHER)
FT /product="p89"
FT /note="putative RNA-dependent RNA polymerase; produced by a
FT readthrough of the amber codon"
FT /db_xref="GOA:Q27YA5"
FT /db_xref="UniProtKB/TrEMBL:Q27YA5"
FT /protein_id="ABC67516.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE
FT DAEEESDIGEEIVVGTIGIGIHANVNPEGRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS
FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNSSLANLRRGLIERVFFVEND
FT KKELEPAPKPLSGAFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL
FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG
FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY
FT LDAFCHDSHLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH
FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQLE
FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV
FT VQSYYNMMIRNTQSINSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT
FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL"
FT CDS 89. .895
FT /codon_start=1
FT /product="p29"
FT /db_xref="UniProtKB/TrEMBL:Q27YA4"
FT /protein_id="ABC67520.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE
FT DAEEESDIGEEIVVGTIGIGIHANVNPEGRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN"
FT CDS 2443. .2640
FT /codon_start=1
FT /product="p7A"
FT /note="movement protein"
FT /db_xref="GOA:Q8V993"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProtKB/TrEMBL:Q8V993"
FT /protein_id="ABC67517.1"
FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNF"
FT CDS 2644. .2829
FT /codon_start=1
FT /product="p7B"
FT /note="movement protein"
FT /db_xref="UniProtKB/TrEMBL:Q27YA2"
FT /protein_id="ABC67518.1"
FT /translation="MACCRCDSSPGDYSGALLILFISFVFFYITSLSSQGNTYVHHFDN
FT SSVKTQYVGISTNGDG"
FT CDS 2816. .3988
FT /codon_start=1
FT /product="p42"
FT /note="coat protein"
FT /db_xref="GOA:Q27YA1"
FT /db_xref="UniProtKB/TrEMBL:Q27YA1"
FT /protein_id="ABC67519.1"
FT /translation="MAMVRRINNLPTVKLAKQALPLLANPKIVNKAIDVVPLVVQGGQK
FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI
FT ASVLPSNDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS
FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV
FT DRKLVDFGQFLFATYSGAGDTAHGDLYVEYAVEFKDPQPIAGMVCTFDRSVSFSEVGST
FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVS
FT SSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA"
XX
SQ Sequence 4268 BP; 1063 A; 892 C; 1066 G; 1247 T; 0 other;
dq339157 Length: 4268 19-JUL-2006 Type: N Check: 5668 ..
1 ggattactct agccggatcc ccgactctct tattttctgt aagttagttc
51 gtgtattgat tgtctgtctt gatcagtata ggttagcaat ggatactggt
101 ttgaaatttc ttgtttctgg gggtttagcc acctcatctg ttatcaggaa
151 agtgagtgct gtgagttcat tggattcgtc ccttccttca tcatctatat
201 tatctgccat ccatgggtct tggactagtg ctatcagcca cgattgtagt
251 aaaattgcca aggttgccgc cgtagttggt attggttatc ttggggtcag
301 gattggtgcc gcttggtgcc gtcgtactcc cgggataacg aattccataa
351 tcacctatgg ggaagaagtg gttgagcaag tgaaggtaga tattgatgaa
401 gatgctgaag aggagtccga tattggtgag gaaattgtgg ttggcacgat
451 aggcattggt atacacgcaa acgtcaaccc tgagggtcga gctaagcgta
501 gacatagatc gaggccattc attaagaaga ttgtgaattt aacgaagaat
551 cacttcggtg ggtgccccga ctctagtaaa tcgaacgtca tggctgtaag
601 caaattcgtc tatgaacaat gcaaacagca caattgtctt ccacatcaaa
651 cgagattgat catgagtatt gcagttccat tggtgctaag tcccgatatg
701 tacgacattt ccagcaaagc tctgttaaac agcgagatat tgacagaaaa
751 cagagctacg ctggaccgcc tcaaaactct tgatgggtgg ttaacacatt
801 tggtgtgcca cccccttagc gcgaaggctt ggaggcgggc aattgacaac
851 ttgtgtggtc ttccagattg gaaggctttc aagttggtca actaggggtg
901 cctagaggag ctcgctgggt tctgtacttc ggtacggaga gggacacacc
951 cagacatgac cgagtttcct caggatcgtc ccattaagac acgcaaactg
1001 tattgtttag ggggagttgg aactagcgtg aagttcaacg tgcataatag
1051 ctctctagct aaccttcggc gcggtctaat tgagcgcgtt ttctttgttg
1101 aaaatgataa aaaggaacta gagcctgccc ctaaacctct tagtggtgcg
1151 tttgatcgct taacttggtt tcgtcggaaa ctccataata ttgtgggtac
1201 tcattccagt attagtccag gtcaattcct ggacttctat actggcagga
1251 ggcgcacgat ttatgaaggt gccgtgaaat cgttggaggg gttaagtgtt
1301 caacgaaggg atgcctatct gaaaacgttt gttaaagcgg agaagatcaa
1351 taccactaag aagcctgacc cagctccgcg ggttatacaa ccgaggaacg
1401 taagatataa tgttgaggtt ggtcgttatc tacgaaggtt tgagcattac
1451 ctctatcgag gaattgacga aatctggaat ggccccacca taataaaagg
1501 atacactgtc gagcaaattg ggaaaatcgc ccgtgacgct tgggactctt
1551 tcgttagtcc tgtagcaatc gggtttgaca tgaaaaggtt cgaccaacat
1601 gtatcctccg atgctcttaa atgggaacat agtgtttatc ttgacgcttt
1651 ttgccacgac tcacatctcg cagaattgtt agagtggcaa ttagttaata
1701 agggtgttgg gtatgctagt gatggaatga ttaaatataa ggttgatggg
1751 tgccggatga gtggtgacat gaatacagct atgggtaact gtttgattgc
1801 ctgtgctatc acgcatgatt tcttccgtag tcgtggtatc agggcgcgtt
1851 tgatgaacaa tggtgatgac tgtgtcgtaa tatgtgaaaa agaatgtgcc
1901 gcggtggtta aagccgacat ggtaaggcac tggagacaat tcgggtttca
1951 atgcgaactc gagtgcgacg cagaaatctt cgagcaactt gagttttgtc
2001 aaatgcgacc tgtgtacgac ggggagaaat acgtgatggt gcggaatcct
2051 ttggttagcc tatctaaaga ttcctactca gtcggccctt ggaatggaat
2101 caaccatgca cgcaagtggg ttaatgcagt tggcttgtgt ggcttatccc
2151 tcactggtgg aattcctgtt gtccagagtt attataatat gatgatccgc
2201 aacacccagt ccataaacag ttctggcata cttcgcgatg tcagctttgc
2251 tagtggattt cgggagttag cgcgattggg taacaggaaa agtggtgcca
2301 tatctgaaga cgcccgtttt agcttttatc tcgcatttgg cattactcca
2351 gatttacaac gtgccatgga aagtgactat gatgctcata ccatagagtg
2401 gggtttcgtg ccccagggaa atcctagaat acagccaatc tcatggactc
2451 tcaacgaact gtagaacaaa ctaatcctcg tggaagaagt aaagaacgtg
2501 gtgacagcgg gggaaaacag aagaactcaa tggggcgaaa gatagccaat
2551 gatgctatct ctgaatcgaa gcaaggagtt atgggtgcta gcacatacat
2601 tgctgataaa attaaggtga ctattaactt taacttttag tgtatggctt
2651 gttgccgttg cgactccagc cccggggatt actctggagc gttgcttata
2701 ttatttatct catttgtttt cttttatatt acctcgctta gctcgcaagg
2751 aaatacttac gttcatcact tcgataactc ttccgttaaa acacaatacg
2801 ttggcatctc tacaaatggc gatggttaga cgcattaata atttacccac
2851 agtgaagctt gctaagcagg ctctacccct gctagcgaac cctaaaattg
2901 taaataaagc tatagatgtg gttcctttgg tcgtccaagg tggtcagaaa
2951 ttgtccaagg ctgctaagcg attgcttggc gcttatggag gcaacatttc
3001 gtacactgag ggtgccaaac caggcgcaat atcagctcct gtcgctatta
3051 gtcggcgagt ggctggtatg aagcctaggt ttgttcgatc ggaaggatct
3101 gtgaagatag ttcataggga gtttattgcc tctgttcttc cttcgaatga
3151 tctcactgtt aataatggtg atgtcaacgt cggcaagtat agagtcaatc
3201 ccagtaataa cgctttattc acatggcttc agggacaagc gcaactatat
3251 gatatgtaca gatttactcg gctccgtttc acctatattc ctactaccgg
3301 atcgacttcc acgggtcgtg tttctatcct ttgggataga gattctcagg
3351 accccctccc tattgatcgt gctgccatta gctcttatgc tcattacgct
3401 gattcagcgc cttgggccga gaatgtccta gtggttcctt gtgataatac
3451 gtggaggtac atgaatgata ccaatgctgt cgaccggaag ttggttgatt
3501 ttgggcagtt ccttttcgct acttactctg gtgctggtga caccgcccat
3551 ggtgatcttt atgtcgagta tgctgtggaa ttcaaggacc cccagcctat
3601 cgctgggatg gtatgtacgt ttgatcgctc tgtttccttc tctgaagttg
3651 ggtctactat taagggagtc aattatattg ctgatcgtga tgtgataacc
3701 actgggggca atattggtgt taacatcaat attcccggga cttatctcgt
3751 cacgattgtt cttaatgcca catcgattgg ttccctcacc ttcactggta
3801 attctaaact tgtaggcaac agtcttaacg tttccagcag tggtgcatct
3851 gctcttacgt tcactcttaa ctccactggt gtgcccaaca gtagtaattc
3901 ttcattctct gtgggtaccg ttgttgcatt gactagggtg cgtatgacga
3951 tcactcgctg ctctccagaa acagcctacc tcgcctaatt tgatttattg
4001 tactccaaat ttggtctccc atattcctac ctgttctcag ccagatctct
4051 gttctggtgt cctataggca tccttgtcgt gtgtagtgcg gtctggctaa
4101 ccgtaacggc gtatcggctt ggctttccaa tgattaggct ccgggatgta
4151 cgacatagct gaagatggat ggagttcggt agaccaccgc tagcaaaata
4201 cactctgtgt ggggcgtgct agtggatagt catgtatgtt tgagatgggt
4251 tataggccca tcccgccc