ID EU616903; SV 1; linear; viral cRNA; STD; VRL; 6894 BP.
XX
AC EU616903;
XX
DT 29-APR-2008 (Rel. 95, Created)
DT 08-OCT-2010 (Rel. 106, Last updated, Version 4)
XX
DE Chatanga virus strain LEIV-17756 segment L, complete sequence.
XX
KW .
XX
OS Chatanga virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus.
XX
RN [1]
RP 1-6894
RX PUBMED; 19172903.
RA Lavrent'ev M.V., Prilipov A.G., L'vov S.D., L'vov D.K.;
RT "[Phylogenetic analysis of the nucleotide sequences of Chatanga virus
RT strains, the new representative of California encephalitis serocomplex,
RT isolated in different regions of the Russian Federation]";
RL Vopr. Virusol. 53(6):25-29(2008).
XX
RN [2]
RP 1-6894
RA Lavrentev M.V., Prilipov A.G.;
RT ;
RL Submitted (03-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL Molecular Genetics, Ivanovsky Virology Institute, Gamalei 16, Moscow
RL 123098, Russia
XX
FH Key Location/Qualifiers
FH
FT source 1. .6894
FT /organism="Chatanga virus"
FT /segment="L"
FT /host="Aedes sp."
FT /strain="LEIV-17756"
FT /mol_type="viral cRNA"
FT /country="Russia:Iakutia Republic"
FT /collection_date="1988"
FT /note="passaged on suckling mice whole brains serogroup:
FT California"
FT /db_xref="taxon:507486"
FT gene 10. .6801
FT /gene="L"
FT CDS 10. .6801
FT /codon_start=1
FT /gene="L"
FT /product="L polyprotein"
FT /note="polymerase"
FT /db_xref="GOA:B2MUB2"
FT /db_xref="InterPro:IPR007099"
FT /db_xref="InterPro:IPR007322"
FT /db_xref="UniProtKB/TrEMBL:B2MUB2"
FT /protein_id="ACC77564.1"
FT /translation="MDHQEYQQFLARINAARDACIAKDIDVDLLMARHDYFGKELCKSL
FT NIEYRNDIPFIDIILDIRPEVDPLTLDAPHITPDNYLYINNILYIIDYKVSVSNESSMI
FT TYDKYYELTRDISNRLNIPIEIVIIRIDPVSRDLHISSDRFKEIYPTLVVDINFNQFFD
FT LKQMLYEKFGDDEEFLLKVAHGDFTLTAPWCKTGCPDFWKHPIYKEFKMSMPIPERRLF
FT EDSVRFNAYESERWNTNLVKVREYTKKEYSEYVSKSAKNIFLATGCYKQPNKNEISNGW
FT SLMIKRVQEQREISKSLHDQKPSVHFIWGAHNPGNSNNATFKLILLSKSLQSIKGLSTY
FT TEAFKSLGKMMDIGDRVSEYEEFCISLKGKARSSWKQIMNKKLEPKQINNALVLWEQQF
FT MVNNELIDKNEKLKLFKNFCGIGKHKQFKNKMLDDVDTSKPKILDFDDPDMYLASLTMM
FT EQSKRILSKDSGLKPDNFILNEFGSRIKDANKETYENMHRIFETRYWQCISDFSTLMKN
FT ILSVSQYNRHNTFRIAMCANNNVFAIVFPSADIKTKKATVVYSIIVLHKDEDSVFNPGC
FT LHGTFKCANGYISISRAIRLDKERCQRIVSSPGLFLTTCLLFKHDNPTLVMSDIMNFSI
FT FTSLSITKSVLSLTEPARYMIMNSLAISSNVKDYIAEKFSPYTKTLFSVYMTRLIKNAC
FT FDAYDQRQRVQLRDIYLSDYDITQKGIKDNRELTSIWFPGSVTLKEYLTQIYLPFYFNA
FT KGLHEKHHVMIDLAKTILEIENEQRESIKEIWSTDCTKQTVNLKVLLHSLCKNLLADTS
FT RHNHLRNRIENRNNFRRSITTISTFTSSKSCLKIGDFRKEKEMQSIKQKKILETESRKR
FT RLANPMFVTDEQVSLEVGHCNYGMLREAMPNYTDYISTKVFDRLYELLDKEVLTDKPVI
FT EQIMDIMINHKKFYFTFFNKGQKTSKDREIFVGEYEAKMCMYAVERIAKERCKLNPDEM
FT ISEPGDGKLKVLEQKSEQEIRFLVETTRQKNREIDEAIEALAAEGYENNLEKIERLSAS
FT KARGLKMEINADMSKWSAQDVFYKYFWLIALDPILYPQEKERILFFMCNYMQKELILPD
FT ELLFNLLDQKIVYQNDIITTMTNQLNSNTVPIKRNWLQGNFNYTSSYVHSCAMSVYKEV
FT LKEAITLLDGSILVNSLVHSDDNQTSITIVQDKVENDKIIDFAMKEFEKACLTFGCQAN
FT MKKTYVTNCIKEFVSLFNLYGEPFSIYGRFLLTSVGDCAYIGPYEDLASRISSAQTAIK
FT HGCPPSLAWVSIAISHWMTSLTYNMLPGQSNDPLDYFPAENRKEIPIELNGVLDAPLSM
FT ISTVGLESGNLYFLIKLLNKYTPVMSKRESVVNQIAEVKNWKIDDLTDNEVFRLKILRY
FT LVLDAEMDPSDIMGETSDMRGRSILTPRKFTTAGSLRKLYSFGKYQDRLSSPGGMLELF
FT AYLLEKPELLVTKGEDMKDYMESVIFRYNSKRFKESLSIQNPAQLFIEQILFSHKPVID
FT FSGIRDKYINLHDSRALEKEPDILGKVTFTEAYRLLIRDLASLDLTNDDIQVIYSYIIL
FT NDPMMITIANTHILSIYGSPQKRMGMSCSTMPEFRNLKLIHHSPALVLRAYSKNNPDVQ
FT GADPTEMARDLVHLKEFVENTGLEEKMKARIALNEAEKGQRDIVFELKEMTRFYQVCYE
FT YVKSTEHKIKVFILPAKSYTTTDFCSLMQGNLIKDKEWYTVHYLKQILSGGHKAIMQHN
FT ATSEQNIAFECFKLITHFADSFIDSSSRSAFLQLILDEFSYKDVRVSKLYDIIKNGHNR
FT TDFIPLLFRTGDLKQTDLDKYDAMKSHERVTWNDWQTSRHLDMGSINLTITGYNRSITI
FT IGEDNKLTYAELCLTRKTPENITISGRKLLSSRHGLKFENMSKIQTYPGNYYITFRRKD
FT RHQFVYQIHSHESITRRNEEHMAIKTRIYNEITPVCIVNVAEIDGDQRILIRSLDYLNN
FT DVFSLSRIKVGLEEFATIKKAHFSKMVSFEGPPIKTGLLDLTELMKSQDLLNLNYDNIR
FT NSNLISFSKLICCEGSENINDGLEFLSDDPMNFTEGEAIHSTPIFNIYYSKRGEKHMTY
FT RNAIKMLIERETKVFEEAFTFSSNGFVSPENLGCLEAIVSLIKLLKTNEWSTVIDKCIH
FT ICLIKNGMDHMYHSFDIPRCFMENPITRDINWVMFREFVNSLPSTDIPPWNVMTENFKK
FT KCIALITSRLETQRDFSEFAKLMKKEGGRSNIEFD"
XX
SQ Sequence 6894 BP; 2525 A; 1123 C; 1332 G; 1914 T; 0 other;
eu616903 Length: 6894 08-OCT-2010 Type: N Check: 6993 ..
1 atatgcataa tggaccatca agagtatcaa cagttcctgg ccagaattaa
51 tgctgctagg gatgcttgta tcgccaaaga tatagacgtt gatttattga
101 tggctaggca tgactacttt ggaaaggaat tatgtaaatc tttgaacata
151 gaatatagaa atgatatccc atttattgat ataatattag acataagacc
201 tgaggttgat ccgttgactt tggatgcacc acatatcact cctgataatt
251 acttatatat aaacaatatc ttatatatta tagattataa ggtgtctgta
301 tcaaatgaga gtagcatgat aacatatgat aaatattatg agttgactag
351 ggacatatcc aatagattaa atattccaat agagatagtc attattcgca
401 tagatccagt aagtagggac ctgcacataa gctctgacag atttaaggaa
451 atatatccta cgttagttgt agatatcaat tttaaccaat tttttgatct
501 aaaacaaatg ctttatgaga agtttggaga tgatgaagaa ttcttgctga
551 aagtcgcaca tggtgatttc accctaacag ctccatggtg caaaacagga
601 tgcccagatt tttggaagca tccaatatac aaagaattta agatgagtat
651 gcccatacca gagcgtagac tctttgaaga ttctgtgaga ttcaatgcgt
701 atgaatctga aagatggaac accaatctgg tcaaagtaag agaatacaca
751 aaaaaagaat attcagaata tgtatcaaaa tcggcgaaaa acatattctt
801 ggcaactggg tgttacaaac aacctaacaa aaatgagatc agtaatggat
851 ggtctctaat gataaaaaga gtacaagagc agagagaaat ttcaaaatca
901 cttcatgatc agaaaccgag tgtacacttt atatggggag cccataatcc
951 aggaaatagt aataatgcga catttaaact aatattgctt tctaaatcac
1001 tgcaaagtat aaaaggtttg tctacttata ctgaagcttt caaatcatta
1051 ggaaaaatga tggatatagg tgatagagta agcgagtatg aagaattttg
1101 tatatcttta aaaggcaaag ctagatcatc atggaagcag ataatgaata
1151 aaaaattaga accaaagcag ataaacaatg ctcttgtctt atgggagcag
1201 cagttcatgg tgaacaacga attgatagat aaaaatgaaa agttgaaatt
1251 atttaaaaac ttctgtggaa tagggaaaca taagcagttc aaaaataaga
1301 tgcttgatga tgtagacact tcaaagccta aaatattgga ttttgatgac
1351 cctgacatgt atttggcaag cttaactatg atggaacaaa gcaaaagaat
1401 actctccaaa gatagtggcc taaagccaga caatttcatt ttgaatgaat
1451 ttggctccag aattaaggat gccaataaag aaacatatga aaatatgcat
1501 agaatttttg aaactagata ctggcaatgc atatcggact tctctacctt
1551 gatgaaaaac atattatctg tctctcaata taacaggcat aacacattta
1601 ggattgctat gtgtgcaaat aataatgtgt ttgctatagt atttccgtct
1651 gcagatataa aaacaaaaaa agccaccgta gtttatagta taatagtctt
1701 gcataaagat gaagatagtg tcttcaaccc aggatgtctt catggcacat
1751 ttaaatgtgc aaatggctac atatctatct ctagggctat aaggttggat
1801 aaagagaggt gccagcgtat tgtgtcatct ccaggactat tcctgactac
1851 ctgtctgtta tttaaacatg acaaccctac cttggtaatg agtgacatta
1901 tgaatttttc cattttcact agcctgtcta taacaaaaag tgtactgtca
1951 ttaaccgagc ctgcacgcta tatgattatg aattcactgg caatttctag
2001 taacgttaag gattatatag cagagaaatt ctcaccatat accaaaaccc
2051 tgtttagtgt ttatatgact agattgataa agaacgcttg ctttgatgct
2101 tatgaccaaa gacagcgtgt tcagcttaga gacatatatt tatctgacta
2151 tgatataact caaaaaggaa taaaagacaa cagagagtta actagcatat
2201 ggttccctgg cagtgtcact ttaaaagagt acttaaccca gatatatcta
2251 ccattttact tcaatgcaaa ggggttacat gaaaaacatc atgttatgat
2301 agacttagct aagactatat tagaaataga gaatgaacag agagaaagca
2351 taaaggaaat ttggtcaaca gactgtacta agcaaacagt taatttaaaa
2401 gtcttattac actctttatg caagaatctg cttgcggaca cttctaggca
2451 caaccacctt cgcaatagga tagaaaaccg gaacaatttc agaaggtcaa
2501 tcactactat atcaacattt acaagttcga aatcatgcct taaaataggt
2551 gatttcagaa aagagaaaga gatgcaatct ataaaacaaa agaagatact
2601 agaaacagaa agcagaaaaa ggaggttagc aaatcccatg tttgtaacag
2651 atgagcaggt atcccttgag gttggacatt gtaattatgg aatgttaaga
2701 gaagcaatgc ccaattatac tgactatata tcaacaaaag tctttgacag
2751 gctgtatgaa ttattagata aagaagttct gaccgataaa ccagtcatag
2801 aacaaataat ggatatcatg atcaatcaca agaaatttta cttcactttc
2851 ttcaataagg gacaaaaaac atctaaagac agggaaatct ttgtagggga
2901 atacgaggct aagatgtgta tgtatgctgt tgagagaata gcaaaggaaa
2951 gatgcaaact gaatccagat gagatgatat ctgaacctgg agatggtaaa
3001 cttaaagtct tagaacaaaa atcagagcaa gaaattagat ttctagtaga
3051 gacaacaagg cagaaaaata gagaaattga tgaggcaata gaagcattag
3101 ctgctgaggg ttatgagaac aacttagaaa agatagaaag actgtcagcc
3151 agcaaggcga ggggcctgaa gatggaaata aatgcagata tgtcgaagtg
3201 gagcgctcaa gatgtcttct ataaatattt ctggctcata gcattagacc
3251 ccattctgta tcctcaagag aaagagcgaa ttctattttt tatgtgcaat
3301 tatatgcaaa aagaactgat tttaccagat gaactacttt ttaatctact
3351 ggaccaaaaa attgtatatc agaatgatat tataactaca atgacaaacc
3401 aactgaattc taatacagtc ccaattaaga ggaattggct ccagggcaac
3451 tttaactata catctagcta tgtgcacagt tgtgctatgt cagtatataa
3501 ggaagttctt aaggaagcaa taacactatt ggatggatcc atcctagtaa
3551 actcgttagt gcactctgac gacaaccaaa catctataac tatcgttcag
3601 gacaaggtgg aaaatgacaa aatcatagat tttgctatga aagagtttga
3651 aaaggcttgc ttgacttttg gctgccaagc aaatatgaag aaaacctacg
3701 ttaccaattg tataaaagaa tttgtttctt tgttcaattt gtatggagaa
3751 ccattttcca tatacggtag attcttattg acatctgtag gagattgcgc
3801 atacataggg ccgtatgaag atctagcgag taggatctct tcagcacaaa
3851 cggctataaa gcacggttgc cctccaagct tagcctgggt ttctatagcc
3901 ataagccact ggatgacctc gttaacttat aatatgcttc ctggacagtc
3951 aaatgatcct ctagattact ttccagctga aaataggaaa gaaataccca
4001 ttgaattaaa cggtgtgtta gacgcccccc tatcaatgat aagtacagta
4051 ggtttagaat caggaaatct ctatttctta ataaaattac tcaacaaata
4101 tacaccagtc atgtctaaga gggaatcagt tgtgaatcag atagcagagg
4151 tgaaaaattg gaagatagat gatttgactg acaatgaagt ctttaggctg
4201 aagatactcc ggtacttagt gctagacgct gaaatggatc caagcgacat
4251 tatgggcgaa acaagcgaca tgagagggag atccatactt acacctagga
4301 agttcaccac tgctggtagc ttgaggaagc tgtattcatt tggcaagtat
4351 caggacagac tctcatctcc tggaggcatg cttgagctat ttgcttactt
4401 gcttgaaaag ccagaattac ttgtaacaaa gggtgaagac atgaaagact
4451 atatggaatc tgtaattttt agatacaact ctaaaaggtt taaagagagc
4501 ttatctatcc agaacccagc acaattattt atagagcaaa tacttttttc
4551 acataagcct gtgatcgact tctcaggcat tagggataaa tacattaacc
4601 tacatgatag cagagcctta gaaaaggagc cagatatact agggaaagta
4651 accttcacag aagcatacag attactgatt agagatttgg ccagcctaga
4701 tttaaccaat gatgatattc aagtcatcta ctcgtatata atcttaaatg
4751 atccgatgat gataactatt gcaaatacgc acatactgtc tatatatgga
4801 agtcctcaga aaaggatggg catgtcttgt tcaactatgc cggagttcag
4851 gaatctaaaa ttaatccatc attctccagc tttggttcta agggcatata
4901 gtaaaaacaa tccggatgtt cagggtgctg atcctacaga aatggctagg
4951 gacttagttc atcttaaaga gtttgttgag aatacaggtt tggaagaaaa
5001 aatgaaagcc agaatagcat tgaatgaagc agaaaaaggg caaagagaca
5051 ttgttttcga gctaaaagaa atgactagat tttaccaagt ttgttacgag
5101 tatgtaaaat caacagagca caaaataaag gtctttattc tcccggcgaa
5151 gtcttataca accactgatt tttgttcact tatgcaaggg aatttaataa
5201 aggataaaga gtggtacact gtccactact taaaacagat cctatctgga
5251 gggcacaaag ctataatgca acataatgcc accagtgaac agaatatagc
5301 ttttgaatgt ttcaagctga taacacactt tgcagactct ttcatagact
5351 catcatctag atctgctttc ctgcagctaa tactagatga gttcagttac
5401 aaggatgttc gagttagtaa actctatgat ataataaaaa atggccacaa
5451 tcgaacagat ttcatacctc tactttttag aaccggggac cttaaacaaa
5501 cagatctaga taagtatgat gcaatgaaaa gtcacgaaag ggttacatgg
5551 aatgactggc agacatctcg tcacttagat atggggtcta taaatttaac
5601 aatcactggg tacaataggt ctataacaat tattggagag gataacaaat
5651 taacatatgc agagctatgc ttaacaagga agactccaga aaatattact
5701 ataagtggcc gaaaattact aagttcacgc cacggtctta agtttgaaaa
5751 tatgtctaaa attcagacat atccaggcaa ttattacata acattcagaa
5801 ggaaagaccg gcatcaattt gtatatcaaa tacattccca cgagtctatt
5851 acaagaagaa acgaagaaca catggcaatc aagactagga tatataatga
5901 gataactcca gtatgcattg tgaatgttgc cgaaattgat ggtgatcaga
5951 gaatcctgat aaggtcacta gactatctaa ataacgacgt attctccttg
6001 tctagaatta aagtgggcct tgaggagttt gcaacaataa aaaaagcaca
6051 cttcagtaag atggtttctt ttgaaggccc tccaatcaaa acaggtcttc
6101 tagatctaac agagttgatg aaatcacagg acttattgaa tcttaattat
6151 gataacatac ggaatagcaa tttaatatct ttttcaaaat taatatgctg
6201 tgaaggttct gaaaatatca atgatggcct cgagttttta tccgatgatc
6251 ctatgaattt taccgaaggt gaggcaatac actcaacacc aatattcaac
6301 atatattact caaagagagg agagaagcac atgacatata ggaatgcaat
6351 caaaatgttg atagaaagag agacaaaggt atttgaggag gcgtttacct
6401 tcagcagtaa cggctttgta tccccagaga atctcggctg tctagaggct
6451 atagtctccc taattaagtt attgaaaact aatgagtggt ctacagtcat
6501 agacaaatgc attcacatat gcttgatcaa aaatggtatg gatcatatgt
6551 atcattcttt cgacatccca agatgcttca tggaaaatcc cataaccagg
6601 gacataaact gggtaatgtt tagagaattt gtaaatagtc tacctagtac
6651 ggatataccg ccttggaatg tcatgacaga aaatttcaag aaaaagtgca
6701 tagcattaat aacttcaaga ttagagacac aaagggattt ttcggagttt
6751 gctaaactga tgaagaagga aggcggcaga agcaatatag aatttgatta
6801 ataaagaaaa agattagaaa atgatggggt tagcaaaata aagatgactt
6851 attataaaat tggggggttg ggttgattgg ctaattttca aaaa