ID HM119408; SV 1; linear; genomic RNA; STD; VRL; 4326 BP.
XX
AC HM119408;
XX
DT 03-APR-2011 (Rel. 108, Created)
DT 03-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE Chandiru virus segment M, complete sequence.
XX
KW .
XX
OS Chandiru virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-4326
RX PUBMED; 21289119.
RA Palacios G., Tesh R., Travassos da Rosa A., Savji N., Sze W., Jain K.,
RA Serge R., Guzman H., Guevara C., Nunes M.R., Nunes-Neto J.P., Kochel T.,
RA Hutchison S., Vasconcelos P.F., Lipkin W.I.;
RT "Characterization of the candiru antigenic complex (bunyaviridae:
RT phlebovirus), a highly diverse and reassorting group of viruses affecting
RT humans in tropical america";
RL J. Virol. 85(8):3811-3820(2011).
XX
RN [2]
RP 1-4326
RA Palacios G., Savji N., Sze W., Lipkin W.I.;
RT ;
RL Submitted (14-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL Center for Infection and Immunity, 722 West 168th Street, New York City, NY
RL 10032, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .4326
FT /organism="Chandiru virus"
FT /segment="M"
FT /host="Homo sapiens"
FT /mol_type="genomic RNA"
FT /country="Brazil"
FT /collection_date="1967"
FT /db_xref="taxon:629725"
FT CDS 63. .4025
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains G1, NSm, and G2 proteins"
FT /protein_id="AEA30045.1"
FT /translation="MKILHLLTNIMYALGAYIITGWSMEGTTRVCLSNESPLEGIVYYW
FT ETERKRRGMESSSNLDCRVGEGELKRISNKTLIRLIEEVQLSTYELKVSCEKSSNDTGL
FT SIDFNGLDDTEPGHHIVDCEKMRYVSDLGVTVGDGLAWDSRYNESYKQELLRKDEKLRE
FT FENELSHLKLTGIDDKNEIMSLIRENQMLQHRISNLTGSNENKNNSLRILKNELMQAES
FT HRDNLEREILNHKDRHAKLEGDFIKLKSSMFSVQVVTTVLPLLSLVGTSLAATPIMLQN
FT PYPHVKNRVGSGLYRFTENEDDPTCAKLDYGHACAGFDYMIRPDKYPFFNSHVMHHTPL
FT EAYVDKILESSGESCEIAAGKDIKCLEQRKYMKGHCPNGINGVYFINDKGKLSHARCKA
FT EDHEITEDCTFCRRMKKKNNKSVVMKTSVSLQDAFCQNNSESYTGPQIPFKGVCSIGSF
FT EYKRCEQSTSNFMTIPFVVFKNKGKIYLEKLITKNIEVVESIPFICFTHKGQDNQEVEI
FT SSLKRVQMSECKNINNSKEKYCTGDHTFCEKYGCSGTYPEYKCIMAPGAGPVLVNILGN
FT WVKPQCIGYETVLVKKEVKVKRVEAPTECETCIYNCEPDGLKITSTGFQITSGVSCSHG
FT SCISQHQEPSTSIKIPYPGMFSAMGGHIGIHLSHTDDSLSLHMRAYCDPQDVCETHHCF
FT FCVNGIVNYQCHSILSSLIVSILLSIIIYFVLIIIGKMLYFFKVIPKKLRSPFMWLALL
FT FRWVIDLVRSTLSKLKTRLNRSIGWDGQDRGNELREVRVRRPIPRFAATLSIICLLTTG
FT ALACSETLISNSKQTKCVQSSDKVKCSVSATVTLKAGIIGAESCFILKGPMENQRKTIR
FT IKTLSSELVCREGNSFWTSHYSPTCLSSRRCHLMSDCTGNRCQRWTDEEVSQEFKGVND
FT NMVMNENKCFEQCGAAGCGCFNINPSCLFVHSSFRSVRPEAIRVFSCADWVHRLSFLVY
FT GPNREREEISLGSLGTKFLSWGTISLSLDAEGITGTNSISFLESSKGGFALHDEAFSEI
FT PREGFLGEIRCSSESAAISAHSSCIRAPNLIKYKPMTDQIDCTASLVDPFAAFVKGSLP
FT QVRNGMTFTSSKDKKTIQAFNSGSIKAMVTINLDDYEIEFLSDIAKCEATFVNLTGCYS
FT CNYGARVCVRVKTDRDADFVATQVDQEFHLAFAVWNGVQDYCQTIHFNKPEIDSITKYS
FT CGGEERMLHIKGLLISLGVQDLRNSTGGASIVVNPSDSSWSLTGWASGLISWLGGSWMA
FT VLKIIGFLLLGFLCAFIMLSLIKFLGISYLRKKKLT"
XX
SQ Sequence 4326 BP; 1385 A; 743 C; 953 G; 1245 T; 0 other;
hm119408 Length: 4326 03-APR-2011 Type: N Check: 9424 ..
1 acacaaagac ggcatattat ctgaacattt atattttgtt aactgagagt
51 aagtgtacaa acatgaagat tttacactta ttgactaata taatgtatgc
101 cctaggggct tacattataa ctggatggag catggaaggg accaccagag
151 tgtgtctctc caatgagtct ccattagaag gaatagtcta ttattgggaa
201 accgagagga aacgaagggg aatggaatca tcttctaatc ttgattgcag
251 ggtaggagaa ggtgaactga agaggattag caataagacc ttgatcagac
301 ttatagagga agtgcagttg tctacttatg agctaaaggt tagttgtgaa
351 aagtcttcta atgatactgg attgtctatt gattttaatg gtttggatga
401 cactgaacct ggtcatcata ttgttgattg tgaaaagatg agatatgtat
451 cagatctagg tgttactgtg ggagatggtt tggcttggga ttcaagatat
501 aatgaaagct acaagcagga gttattgagg aaagatgaaa agctaagaga
551 atttgaaaat gaattaagtc acctcaagct tacagggatt gatgacaaga
601 atgaaatcat gtccctgatt agagaaaatc aaatgttgca gcatagaatc
651 tccaatttaa cagggtccaa tgagaacaaa aataacagtc taaggatatt
701 aaaaaatgag ctaatgcagg cagaatctca cagagataat ctagagaggg
751 aaatcctaaa tcataaagac aggcatgcta aacttgaggg tgactttatt
801 aaattaaaga gctcaatgtt tagtgtccag gttgttacta ctgttttacc
851 acttctgtct ctggttggga ccagtcttgc tgcaacacca ataatgctac
901 aaaacccgta tcctcatgta aaaaataggg tgggaagtgg actatataga
951 ttcactgaga atgaagatga tccaacttgt gccaagcttg actatggtca
1001 tgcgtgtgct gggtttgatt atatgataag gccagacaag tacccattct
1051 tcaattccca tgtgatgcac cacactcctc ttgaggctta tgttgataaa
1101 atcctcgagt catcaggtga gagctgtgaa atagccgcag ggaaggacat
1151 aaaatgcttg gaacagagaa aatacatgaa agggcattgc ccgaatggca
1201 ttaatggtgt ctactttata aatgacaagg ggaagctgag tcatgcaaga
1251 tgcaaagctg aagatcatga aataacagag gactgcacat tttgcaggag
1301 aatgaagaag aaaaacaaca aatctgttgt gatgaaaaca tcagtatccc
1351 tacaggatgc cttttgccag aataactctg aaagctacac tggtccacag
1401 atacctttca aaggtgtgtg cagtattgga tcattcgaat acaaaaggtg
1451 tgagcaatcc acttctaact ttatgaccat tccttttgta gtatttaaaa
1501 ataaagggaa aatatatcta gaaaagctaa taacaaaaaa tatagaagta
1551 gttgagagca tcccgtttat ttgtttcact cacaaaggtc aagacaatca
1601 agaggtggag ataagtagtc tgaagagagt ccaaatgtct gaatgcaaaa
1651 acataaataa ttccaaagaa aaatactgta caggtgatca caccttctgt
1701 gaaaaatacg gttgttcagg aacttaccca gaatacaaat gcattatggc
1751 acctggtgct gggcctgttc ttgtgaacat cttaggaaac tgggttaagc
1801 ctcaatgcat tggttatgag actgttctag tgaaaaaaga ggtgaaggtg
1851 aaacgagtgg aggcacctac agaatgtgaa acatgtattt ataactgtga
1901 gccagatggc ctgaaaataa cctctactgg atttcagatt acatcaggag
1951 tttcctgctc ccatgggtca tgtatttctc agcatcaaga gccttctact
2001 tcaattaaga ttccttaccc tgggatgttt tcagcaatgg gagggcatat
2051 tggcatacac ctatctcaca cagacgactc tttgagtctc cacatgaggg
2101 cttattgtga ccctcaagat gtgtgtgaga ctcatcactg ttttttctgt
2151 gtcaatggaa tagttaatta tcagtgtcac tcaatcctaa gctctcttat
2201 agtgtcaatc ctgttatcaa ttatcatata ttttgttttg atcataattg
2251 gcaagatgtt atacttcttc aaagtcatcc caaagaagtt gagaagtcct
2301 ttcatgtggc tagccctatt atttagatgg gtgattgact tggtcaggag
2351 cactttatcc aagctcaaga ccagacttaa tagatctatt ggctgggatg
2401 gtcaagatag aggcaatgaa ctgagggaag tcagagtgag gaggcccatc
2451 cctaggtttg ccgcaactct gtccataatt tgcttgctca ccactggtgc
2501 cctggcctgt tcagaaacgt taatctcgaa ttcaaaacaa accaaatgtg
2551 tgcagtcatc tgataaggtg aaatgctctg tgtcagccac ggtgacctta
2601 aaagctggca ttattggtgc tgagtcatgt tttattttga agggtccaat
2651 ggagaatcag agaaagacaa tacgtataaa aacattatca agcgagctag
2701 tgtgtagaga gggcaatagc ttctggacta gtcactatag tcccacatgt
2751 ttgagttctc gcagatgcca cctgatgagt gactgtactg gcaatagatg
2801 ccagagatgg actgatgaag aggtttctca agagtttaaa ggagtcaatg
2851 acaatatggt tatgaatgaa aacaaatgct ttgaacaatg tggggcagct
2901 ggctgtggtt gttttaatat caatccttct tgcttatttg ttcattcttc
2951 ttttaggagt gttagaccag aggccataag agtgttttct tgtgctgact
3001 gggtgcacag attgtccttt ttggtttatg gacctaatag ggaaagagaa
3051 gagatatctc taggctcact aggcacaaag tttttgtcat gggggaccat
3101 ttctttatcc ctagatgcag aaggaataac tggcacaaac tctattagtt
3151 tccttgagag tagcaaagga ggatttgctt tacatgatga ggctttttct
3201 gaaattccac gtgagggttt ccttggtgag atcagatgtt cttctgaatc
3251 agctgccata tcagcacact cttcgtgcat cagggcaccc aacttaataa
3301 agtataaacc tatgacagac caaatagatt gtacagcttc tctggttgac
3351 ccatttgctg cctttgtaaa aggctctcta cctcaggtga gaaatggaat
3401 gacatttaca agttctaagg acaaaaaaac tattcaagca tttaatagtg
3451 ggtccattaa agcaatggtg acgattaact tggatgacta tgaaattgaa
3501 tttttgtccg acatagccaa atgtgaagca acatttgtca acttaacagg
3551 ttgctattct tgtaactatg gggctagagt gtgcgttaga gtgaaaactg
3601 atagagatgc agattttgtt gccactcagg ttgaccaaga gttccactta
3651 gcttttgctg tttggaatgg tgttcaagac tattgccaaa caatacactt
3701 caataaacct gagatagatt caataaccaa atattcatgt ggaggtgaag
3751 aaagaatgct acatataaaa ggacttttaa tttctttagg tgttcaggat
3801 cttagaaatt caacaggtgg ggcttcaatt gtagtgaatc cctctgattc
3851 ttcttggagt ctaactggct gggcaagtgg tctgatctca tggttgggag
3901 gttcttggat ggcagttcta aagattattg gttttttact attaggattc
3951 ctgtgcgcat tcattatgct gtccttaata aaattcttag gcatatctta
4001 tctaagaaag aaaaaactaa catgaggtga acagagtctc acaacaaagc
4051 ttcaaggata gaacaagaac aaataatcaa gagaggaaaa tcaaacataa
4101 aaaccatgaa acacacacac caaatcacac cacacacaca ttaaacaaaa
4151 tgcaacattc attcacactc tccctggcag agaatgaaag tggaaaatta
4201 gagacatttg acacagatca tcctttaaaa cactcatcta agatcaagat
4251 tgaggtttag gtgggatact gagggtttcc tcttctttat attattaagt
4301 tgatgtggta gtgccggtct ttgtgt