ID HM566155; SV 1; linear; genomic RNA; STD; VRL; 6379 BP.
XX
AC HM566155;
XX
DT 20-APR-2011 (Rel. 108, Created)
DT 27-MAY-2011 (Rel. 109, Last updated, Version 2)
XX
DE Durania virus strain Co Ar 171162 segment L, complete sequence.
XX
KW .
XX
OS Durania virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-6379
RX PUBMED; 21325481.
RA Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA Hutchison S., Tesh R., Lipkin W.I.;
RT "Aguacate virus, a new antigenic complex of the genus Phlebovirus (family
RT Bunyaviridae)";
RL J. Gen. Virol. 92(PT 6):1445-1453(2011).
XX
RN [2]
RP 1-6379
RA Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA Travassos da Rosa A., Lipkin W.;
RT ;
RL Submitted (19-JUN-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, 17th Floor, New York, NY 10032, USA
XX
CC GenBank Accession Numbers HM566155-HM566157 represent the complete
CC genome of Durania virus strain Co Ar 171162.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6379
FT /organism="Durania virus"
FT /segment="L"
FT /host="Lutzomyia sp."
FT /strain="Co Ar 171162"
FT /mol_type="genomic RNA"
FT /note="serogroup: Aguacate"
FT /db_xref="taxon:1006585"
FT gene 20. .6277
FT /gene="L"
FT CDS 20. .6277
FT /codon_start=1
FT /gene="L"
FT /product="polymerase"
FT /protein_id="AEB70976.1"
FT /translation="MNEILQNQPNTQEQYLCKALAHYDDEIFGLAILDYSLREDNGSVV
FT IDFDMASRDEFSTIGSTVKNQVSLSPQELPNFVHNFTFGHLADNTDTPFISMFPAMGDG
FT FDHLTPDLVLRVPSGRTHVIEFSTFRGTSQGSYQSAMLKIGKYESACECRSRIGPITFS
FT VMSVHRYGVWTNLDLDEESVNELVYRFRLAISIFEEMKVLYPELSLVDEELSKTEREVL
FT GVVSTIRMDWGRTEATFPHFKREMFEGFRSSDPDLDYISGIITKCVNNSETAIRDENFY
FT NLDSSHLRIQKNSEVCETAISDYISEMGKEDLRDVNDPKSTVQIPAWVTMQGPEGKDLT
FT PLKALEVTGEHPMQRIWSKVCTSASLELIDRMVDDPESELQNAISGSRERSDERSRYHR
FT VVVDLDQTELEYAATLGVGGKKYRDHHSVKESRVRSKKGFSLEHNTKSLERFIKGGNQA
FT LLEEGSYYCPLLEDMPLRIEAQRIHQPTLTREHGENEFVKNHRLFMESPLGSWTQMVSL
FT IGAELSASVKQHVKAKSFIVKRLLGSGIYLLIKPTNSKSHIFVSYALDKNYWCHDLSRG
FT TEFKQYLDSGDLFITEFTSYKLSKLTNLCKCCSLTECSLSFWTEAYHEKPWESMEVARA
FT DRQPEIMVMMKYSLMTLLEDKARTEELQTMLRYVVMEGFVSQPELPRPQKMLGKLPRVL
FT RSELQVLLMHRVLASISRIAANPFHLRKTDGCISWTGLFNPLSGSKIQDLQPLISCCYN
FT GYFKNKEEDTEPSALSAMYKKIIELEHLKPDSDRFLGWEDPSDPKTHEFSRSYIKEICN
FT HGKAILKRIYGQSIMQQIDDQITREVSSLTIERLATLKATSNFDENWYIYKDCKDKNYT
FT RDKLLVKMSQFASEGKTLAIEKFEDCMTAIEERGAMHVCLFKKQQHGGLREIYVMGAEE
FT RVVQALVECIAKTVGKFFSSDTLCNPNNKSRIPESHAHRARKHCRSSVWTCATSDDAKK
FT WNQGHFVTKFALMLCEFTSPKWWPIIIRGCSMFTRKYMMMNMRYLDILNGHRELKVDDD
FT FVMTLFLAYHGELDVPWLERGRTYLQTTTGMMQGILHSTSSLLHTLHQEFIRSLSFKIF
FT NLKVSPDMGSRVVCDVMQGSDDSSMIISFPACEDSVFTKCKLAAAMCFRVKKTLGLYAG
FT IYPSEKSTSNTDFVMEYNSEFFFHSSHVRPLIRWIASCCSLPEVETLVARQEEASNLLT
FT SISEGGGSFGLTAMIQQSQCTLHYQLVGMGVSSVFPHYRKALSRWKDPGLGFFLLDNPF
FT AAGLGGFRFNLFKAITMTELQKVYAYFMKKVKEGTTPDDDGVLVPESCSVSPGGAIIMS
FT SSLKWGSRKKFAKLRDRLNIPDDWIDKINHNPQLLYRAPKSGEEIILRIAEKVHSPGVV
FT SSLSTGNAVCKVMASSVYFLSAAIFEDSGKPEFSYLDNSKYSLLQKMIAYDGFTGSHDI
FT DPEDILFLFPNVEELEQLDQIVFDKARIELSERVSSREATQSKIMVFDEKKCMRVSPEK
FT LVSDKWFGTQKSKIGRSAFETEWAKLTRIIRWLKDTPDETMRSSPLSNQIQIRNFFARL
FT EGRTRTVRVTGAPVKKRSGMSKLALVIRDNFCKTGHLKGIEDISGSSRSSSVEILRHIL
FT FSILQGPYSDDSKLDLCIKALSLSTEIELRDQDGKTKANVLSILQSYIWADRGVMRKIE
FT SAGAGTVGGFVKPQKSYKDVDSIKYYGHGVWRGMMDGVDVQIDIDNKKGSPPQITSVRV
FT AGTKSPWLICQSLKVWSDDMGVKNSADFSSTCRKNPKFWLSNFKMFGGNHPLGAPVYVL
FT DGRMEDLREVKDEDIMIKVRRGTLNLYIPGRGSSEMHILSYTSSDSDISPAIVREAESS
FT MGDLMKIFEKEPSKSWICCRSLPVQFVEVLLDVCDGIRKVDRINPIRLAEIIKICTDSS
FT LRTKVGTVFSMQQFTSEAHVVDCDDLFDVMIEDMNTGIFGEVVNKMEEEVRGDNEDLEF
FT DFEDINLFGPAHFKESSELSLVSHPLMDRFVDSAIAKMGRSAMRRLLEVGYTPTRYIHV
FT SRLIYRAIGRNPDSIKTDDLEILQDMDISDEMIG"
XX
SQ Sequence 6379 BP; 2005 A; 1157 C; 1538 G; 1679 T; 0 other;
hm566155 Length: 6379 27-MAY-2011 Type: N Check: 2217 ..
1 acacaaagaa gcccatatca tgaatgaaat attacagaat caaccaaata
51 ctcaagagca gtacttatgc aaggcacttg cacattatga tgatgagatc
101 tttggattag caatactaga ctactctctc agagaagata atggaagtgt
151 tgtaattgac tttgacatgg cctcaagaga tgagttcagc accattggct
201 ccacagtaaa gaaccaagtg agcttgagcc cacaggaatt gccaaacttt
251 gtgcataact tcacctttgg gcatcttgct gacaatacag atactccgtt
301 catcagtatg ttccctgcca tgggagatgg atttgatcat ttaactcctg
351 atcttgtgtt gagggtgcca tcagggagaa ctcatgtcat tgagttttca
401 acattcagag gaacatctca aggatcatac cagtcggcaa tgcttaaaat
451 tggcaagtat gagtcagcct gtgaatgcag gagtaggata ggacccataa
501 ccttttctgt aatgtccgtg cacagatatg gtgtctggac aaatctagat
551 ctggatgaag agtctgtgaa tgaacttgtg tatcgattca ggttagccat
601 tagcattttt gaggaaatga aagttctata tcctgaactg tctcttgtgg
651 atgaagaatt gtctaagaca gaaagagaag ttctcggtgt tgtgtctacg
701 attcgcatgg actggggcag aactgaggca acattcccac atttcaagag
751 agagatgttt gagggtttca gatcttcaga tcctgatctt gactatatat
801 caggaataat caccaagtgt gtgaataatt ctgaaactgc aattagagat
851 gagaattttt ataatttgga ttccagtcat ctgagaatac aaaagaattc
901 tgaagtatgt gaaactgcta tatccgacta catttctgag atgggtaagg
951 aggacctcag agatgtaaat gacccaaagt caactgtgca aatcccagca
1001 tgggtgacca tgcaaggacc tgaaggtaaa gatctcactc ctttaaaggc
1051 attggaagtc acgggtgagc atcctatgca gagaatatgg tcaaaagtgt
1101 gcacatctgc atcgctagag ttaatagaca ggatggtgga tgacccagag
1151 tctgaattgc agaatgccat ttcaggatca agagagagat cggacgagag
1201 gagtaggtat catagagtgg ttgttgacct tgaccagaca gagctagagt
1251 atgcagctac cttgggcgtt gggggaaaga agtacaggga ccatcattct
1301 gttaaggaat ccagagttag gagcaaaaag gggttttccc tagaacataa
1351 tacgaagtca ttggagagat ttatcaaagg aggaaatcag gcactattag
1401 aagaaggaag ctattactgc cccttattgg aggatatgcc actcagaata
1451 gaggcacaaa gaatccacca accaactctg accagagagc atggtgagaa
1501 tgagtttgtg aagaaccaca ggttatttat ggagtcaccc ttgggatcat
1551 ggacacagat ggtgagccta ataggtgccg agctatctgc atctgttaaa
1601 cagcatgtga aagcaaaaag cttcattgtg aaacgactac ttggatctgg
1651 gatttacctt ttgattaagc ctactaactc caaaagccat attttcgtat
1701 catatgcatt ggataagaat tactggtgtc atgatttatc cagaggcact
1751 gagtttaagc aatacttaga cagtggagat ttattcataa cagagttcac
1801 ctcttacaag ctgagcaagc tgacaaatct gtgcaagtgc tgctctctaa
1851 ctgagtgctc actaagtttt tggacagagg cttatcatga gaaaccatgg
1901 gagagtatgg aggtggcaag agcagacaga caacctgaga taatggtaat
1951 gatgaaatat tcactgatga cattgcttga agacaaagct aggactgagg
2001 agttgcagac tatgctcaga tatgttgtca tggaaggctt tgtgtcacaa
2051 ccagagctcc ccagacccca gaaaatgctt gggaagttgc ctagagttct
2101 acgaagcgaa cttcaggtgc ttctgatgca tagagttttg gcatccatat
2151 ccagaatagc tgctaatccc ttccatctta gaaagactga tggctgcatt
2201 tcctggactg gattattcaa cccactgtca ggttctaaaa ttcaagatct
2251 gcaaccacta ataagctgtt gttataatgg atactttaag aataaagagg
2301 aagatacaga gccttctgcc ttatctgcca tgtacaagaa aattattgag
2351 ttggagcacc tcaaaccaga tagtgacagg tttttaggat gggaagatcc
2401 atcagatcct aaaactcatg aattcagcag gtcatatatc aaagagattt
2451 gcaatcatgg aaaggcaatt ctcaaaagaa tatatggcca gagtatcatg
2501 cagcaaatcg acgatcaaat aacaagggag gtgtcttctt taacaattga
2551 gagattagct acattaaagg cgacaagtaa ttttgatgag aattggtata
2601 tatacaaaga ttgcaaagat aagaattaca caagggacaa attgttagtg
2651 aaaatgtctc agttcgcttc agaagggaag actcttgcaa tcgagaaatt
2701 tgaagactgc atgacagcaa tagaggagag aggggccatg catgtttgcc
2751 ttttcaaaaa acagcaacac ggaggcttga gagaaatata tgtaatgggg
2801 gcagaagaga gagtggttca agcactagtt gaatgtatag ccaagaccgt
2851 tgggaaattc ttttcctcag atactctttg caatccaaac aacaagtcca
2901 ggattccaga aagtcatgcc catagagcca gaaagcattg cagatcatca
2951 gtctggacat gtgcaacatc ggatgatgca aagaagtgga atcagggcca
3001 ctttgtgaca aagtttgcac taatgctgtg tgaattcaca tcaccaaaat
3051 ggtggcctat aatcattaga ggatgttcaa tgttcaccag aaagtatatg
3101 atgatgaaca tgagatactt ggacattctt aatggccaca gagaacttaa
3151 agtagatgat gactttgtga tgacattgtt cttagcttat catggtgaac
3201 tagatgtccc gtggttagaa aggggacgga cctaccttca gacaactaca
3251 ggaatgatgc agggtatact gcatagcaca tcctccttac tacacacttt
3301 gcatcaggag ttcatcagat cactatcctt caagatcttc aatctgaagg
3351 tatcaccgga tatgggatca agagtagtct gtgatgtaat gcagggctca
3401 gatgacagct ccatgataat aagcttccct gcatgtgagg attcagtatt
3451 cactaagtgc aagcttgctg cagcaatgtg tttccgggtc aagaaaacac
3501 ttgggctata tgcgggcatc tatccttctg agaagtcaac ttctaacaca
3551 gactttgtga tggagtataa ttctgagttt ttcttccatt ccagtcatgt
3601 gaggcctctt attaggtgga tagcatcatg ttgtagcctg ccagaagtgg
3651 agacgctagt tgcaaggcag gaggaggcct ccaacctgtt aacctctata
3701 tctgaaggtg gagggtcctt tggcctaact gcaatgatac agcagtctca
3751 gtgcactctg cactaccagc ttgttggtat gggtgtgtca tctgtattcc
3801 ctcactatag aaaagctctc tcaagatgga aggatccagg actagggttc
3851 tttcttctag ataacccatt tgcagcaggg ttgggaggct tcagatttaa
3901 cctgttcaag gcaatcacta tgacagagct acagaaggta tatgcgtatt
3951 ttatgaagaa ggtcaaggaa ggaacaactc cagatgatga tggggtgctg
4001 gtaccagaaa gctgcagtgt tagccctggg ggggctatta tcatgagctc
4051 atccctcaaa tggggatcaa ggaaaaaatt tgctaaactg agggacaggc
4101 tcaacatacc agatgactgg atagacaaaa taaaccataa tccacaattg
4151 ttatacagag ctcctaagtc tggtgaagag atcattttaa gaatagcaga
4201 aaaggtccac agccctgggg tggtctcctc tttgtcaaca ggtaatgctg
4251 tctgcaaagt aatggccagt tctgtttatt tcttatcagc agcaatattc
4301 gaggatagtg gaaagcctga attttcatac ctagacaact caaagtatag
4351 tttgttgcag aagatgattg cttatgatgg cttcactgga tcacatgaca
4401 tagatccaga ggacatatta ttcctgttcc ctaatgtgga ggaattagaa
4451 cagctagacc agatagtctt tgacaaagct cgtattgagc tgtctgaaag
4501 agtgagttcg agagaggcca cgcagtcaaa aataatggtg tttgacgaaa
4551 agaagtgtat gcgtgtaagc ccagaaaaac tggtttctga taaatggttt
4601 ggcacacaaa aaagtaagat tgggaggtct gcatttgaga cagagtgggc
4651 caaactcacc agaattatac gttggctcaa agatactcca gacgagacaa
4701 tgaggagctc acccttgtca aatcagattc agataaggaa cttctttgcc
4751 aggctagaag gaagaacaag gacagttaga gtcacagggg cccccgttaa
4801 gaaaagatct ggcatgagta aactagcact cgtgatacga gacaatttct
4851 gcaagactgg tcacctaaag ggcatagagg atataagtgg gagttctagg
4901 tcttcttcag tagagatact caggcacata ctattttcca tactgcaagg
4951 gccctacagt gatgactcaa aactagactt gtgcatcaaa gcactttcat
5001 tatccaccga gattgaatta cgagatcagg atggaaagac aaaagcaaat
5051 gttctaagca tcttgcagag ctacatatgg gcggatagag gtgtaatgag
5101 gaagatagaa agtgctggag ctggtactgt gggggggttt gtcaagcctc
5151 aaaagtcata taaagatgta gactcgatca agtactatgg tcatggggta
5201 tggaggggca tgatggatgg cgtggatgtg cagatcgata tagacaacaa
5251 gaagggcagc cccccccaga taactagtgt tagagtagct gggacaaaaa
5301 gcccatggtt aatatgccag agcttaaagg tttggtctga tgacatgggg
5351 gtcaagaata gtgcagattt ctcatccact tgtagaaaga atccaaagtt
5401 ctggctatca aactttaaga tgtttggtgg gaatcacccc ttgggagcac
5451 ctgtttatgt gctagatggc aggatggaag acttgcgcga agtcaaagat
5501 gaagacataa tgataaaagt tagaagaggg actctaaatc tctacattcc
5551 aggcaggggg agcagtgaga tgcatatact ctcttacaca tcttctgatt
5601 ctgacataag tccagctatc gtgagagagg cagaatcttc tatgggtgat
5651 ctcatgaaga tctttgaaaa ggaacctagc aagtcttgga tatgttgcag
5701 atctcttcct gtgcaatttg tagaggtatt gttagatgtc tgtgatggaa
5751 tcagaaaagt cgacagaata aaccccatca ggctggctga gataatcaaa
5801 atatgtactg actcatctct aaggaccaag gttggcactg tattctcaat
5851 gcaacagttt actagtgagg ctcatgttgt agactgtgat gatctgtttg
5901 atgttatgat agaagatatg aacacaggaa tttttggaga ggttgtcaat
5951 aagatggaag aagaagtgcg tggagataat gaggatcttg aatttgactt
6001 tgaagatata aacttatttg gtcctgcaca ctttaaagag tcaagcgaac
6051 tatcactagt atctcaccct ctcatggaca gattcgttga tagtgcaatt
6101 gctaagatgg ggagaagtgc catgaggaga ctacttgagg ttggctacac
6151 cccaaccaga tatattcatg tttctaggct aatatacaga gctataggtc
6201 gcaacccaga ctccatcaag actgatgact tagaaatcct ccaagacatg
6251 gatatcagtg atgagatgat tggttgaaag cagaacacgg agaagggatg
6301 cttgtctata acgtttgtga gaaggattat tacttagttt aagattattg
6351 atttattcag taatgggcgg tctttgtgt