ID   HQ871944; SV 1; linear; genomic RNA; STD; VRL; 1544 BP.
XX
AC   HQ871944;
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DT   21-MAR-2011 (Rel. 108, Created)
DT   23-JUN-2011 (Rel. 109, Last updated, Version 3)
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DE   Rose rosette virus segment RNA3, complete sequence.
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KW   .
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OS   Rose rosette virus
OC   Viruses; unassigned ssRNA viruses; Emaravirus.
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RN   [1]
RP   1-1544
RX   PUBMED; 21471323.
RA   Laney A.G., Keller K.E., Martin R.R., Tzanetakis I.E.;
RT   "A discovery 70 years in the making: characterization of the Rose rosette
RT   virus";
RL   J. Gen. Virol. 92(PT 7):1727-1732(2011).
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RN   [2]
RP   1-1544
RA   Laney A.G., Keller K.E., Martin R.R., Tzanetakis I.E.;
RT   ;
RL   Submitted (11-JAN-2011) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Dr PTSC 217,
RL   Fayetteville, AR 72703, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1544
FT                   /organism="Rose rosette virus"
FT                   /segment="RNA3"
FT                   /host="Rosa multiflora"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Arkansas"
FT                   /collection_date="May-2008"
FT                   /db_xref="taxon:997821"
FT   CDS             complement(495. .1445)
FT                   /codon_start=1
FT                   /product="putative nucleocapsid p3"
FT                   /db_xref="UniProtKB/TrEMBL:F2YBR4"
FT                   /protein_id="ADZ54690.1"
FT                   /translation="MAPKNEFKKPSKIENPGTSTSNTLAADTVIIGADQKLRVLKLTNV
FT                   QNKKLVKPESSELDPVYIEPTPFTSEIQSPNNFSLAPYRNFCNVGIAVSYLSRSLEIKE
FT                   QLQIRNVFIRTSNKDSLTIVKDLNESDVLNVVSFNKACAILSAGVLKHVFKEEFDWTLK
FT                   KYVPTTVSSRTAPDETVVNRLAGQMGMDSKNPYYWMIVPGYEFLYELYPAEVLAYTLIR
FT                   LEFRKNLNIPDDMTDSDIVNSLVMKMNRIHKLETTPFDDAISLIGREEFALAYVELARD
FT                   IGTTSKSKRNDEAIGKFKELIKNFAPALAADRGAQ"
XX
SQ   Sequence 1544 BP; 457 A; 258 C; 235 G; 594 T; 0 other;

hq871944 Length: 1544  23-JUN-2011  Type: N  Check: 7831  ..
       1  agtagtgttc tcccataatt tatctaagct aacgaaaaac tttttaaaaa
      51  ctcaatatat tggtttctaa agcctaatag cgtttattta ttgatttatg
     101  aaatatataa acggatagag gagttttata tttacatcta tttacaactt
     151  actaactagg tggaacatct ctttttatta taaacaatct agtacatata
     201  ttagttaagc tacataaaat attagtagat atatatttag atttgtagct
     251  tattgaaact tattatagac tagttactac ttatcaatca ttatatttaa
     301  tacaatcatc ttttttgttt attttttttg ctttttatcg ccttttcttc
     351  ttttttttgt tgttttccat tttttatttt ttttgatttt ttttgttttt
     401  ttgttttttt tgttgttttt tgttttttta ttaatataat attcatattt
     451  aataattact tatatacacc ttcagtttta taaaaaactg atatttattg
     501  tgcacctcta tcagcagcta aagcaggagc aaagttcttg atcagttctt
     551  tgaacttgcc tatagcttca tcattcctct ttgatttgct tgttgtacca
     601  atgtctctag caagttcaac atatgcaagg gcgaattctt ctcttccaat
     651  gagacttata gcatcatcga aaggagtagt ctctagcttg tgaatacgat
     701  tcatcttcat gactaaagaa ttgacaatgt cactgtcagt catgtcatca
     751  ggaatattca agttttttcg gaattctaaa cgaataagtg tataagccaa
     801  cacttcagct ggatagagct catacaaaaa ctcataccct ggtacaatca
     851  tccaataata aggatttttt gagtccattc ccatttgtcc tgccagcctg
     901  ttaacaactg tttcatctgg tgcagttctt gatgaaacag tagtaggtac
     951  atacttctta agagtccagt caaactcttc tttgaacaca tgctttagaa
    1001  caccagctga taaaattgca catgctttgt taaacgaaac aacatttaga
    1051  acatcagact cattcaagtc tttaacaatt gtcagagaat ccttgtttga
    1101  tgttcttata aacacatttc ttatttgaag ctgctccttg atttccaggg
    1151  acctagaaag ataagaaaca gctatgccaa cattacagaa gtttctgtaa
    1201  ggtgctagac taaaattgtt gggactttga atctctgaag taaaaggtgt
    1251  aggttcaata taaactgggt ccaattctga actttcaggc tttactagct
    1301  tcttattttg aacatttgtc aacttgagga cccgaagctt ctgatcagct
    1351  ccgatgataa cagtatcggc tgcaagagtg ttggatgtgc ttgttccagg
    1401  attctcgatc ttcgaaggct tcttgaactc attctttggt gccattgtag
    1451  tattctctaa aaacgctgtt ttaatgtgaa ctccaagtat tagattttta
    1501  agaaaagttt atcgatcgat tgataattat gggagttcac tact