ID JN589002; SV 1; linear; genomic RNA; STD; VRL; 3250 BP.
XX
AC JN589002;
XX
DT 02-JAN-2012 (Rel. 111, Created)
DT 02-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE Espirito Santo virus segment B, complete sequence.
XX
KW .
XX
OS Espirito Santo virus
OC Viruses; dsRNA viruses; Birnaviridae.
XX
RN [1]
RC Publication Status: Available-Online prior to print
RP 1-3250
RX PUBMED; 22171264.
RA Vancini R., Paredes A., Ribeiro M., Blackburn K., Ferreira D.,
RA Kononchik J.P.Jr., Hernandez R., Brown D.;
RT "Espirito Santo Virus: A new Birnavirus that replicates in insect cells";
RL J. Virol. 0:0-0(2011).
XX
RN [2]
RP 1-3250
RA Vancini R.G., Ribeiro M.T., Ferreira D.F., Kononchik J.P.Jr., Brown D.T.,
RA Hernandez R.;
RT ;
RL Submitted (16-AUG-2011) to the INSDC.
RL Department of Molecular and Structural Biology, North Carolina State
RL University, 128 Polk Hall, Raleigh, NC 27695, USA
XX
CC GenBank Accession Numbers JN589002-JN589003 represent the complete
CC genome of Espiritu Santo virus.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3250
FT /organism="Espirito Santo virus"
FT /segment="B"
FT /mol_type="genomic RNA"
FT /country="Brazil:Espirito Santo"
FT /identified_by="Ricardo Vancini"
FT /note="passage in Aedes albopictus C6/36 cells"
FT /db_xref="taxon:1127767"
FT CDS 106. .3102
FT /codon_start=1
FT /product="putative VP1"
FT /protein_id="AEW87520.1"
FT /translation="MSDIFNQQGLKSKFTSIIKSENQESNDILVVFNSFSDISLDTAED
FT IEYTDLGSALLEHSVKVFRPKPYDELINVPFTEAASPRMLDLYEEQLGSKDVSLPIGAG
FT QILPTYKPSHEITPPLTTLANSLAFEYMKYIEGSSNPEFDSAIYRTIKELLEIQGATRF
FT STGSLLGQVKRIAAGQDVAYGRNGHHKNKSFRELGLTPYKVMSWLDEYMPIGEGEPDFK
FT LTNTLDWLVYTPQEAELMGVPDSLPAITHSSAAGLPWLGKKKGEVAVSALITANMLIKD
FT TSRILKETLFSGSNDPLEAKREGVAAETAKSKTRSAGQFSSEILKMITTEYSYTMMGLL
FT FPKGERYHRADHLEKTRNIWSASYVTHLLGSIVSDQPAKRMLNVLTSSEPTPSLSKFSP
FT TQGGMDALVNRILEATDITELVYADNAYMYFPREDVWYSIDLTKGEANCTRDIAMTTAM
FT YLLTRGWTSNEGVPLYNYTWAYLALYMIPYTTVDSISILKNFQIKNPGQGSGNPWTFLN
FT NHVLTTILMNKWRAMGRPKPTAQVIEKLSSETGIDFKVELVVPEFKKKLLEAREHSLPV
FT EDRIRPRTIVSMDMLGWDVTHTQYGFTPVLAKERLFKSIACPQPPSSTFSSHVAKQVHK
FT YIQDVALLYVGGWAYPCIAQTIEGYALNHWNTIDSMLRNNPNYDLEKALTKAVDTSPFR
FT EVMELINIRKPMHEQNYASVLYTPKDRPRVQPKRMMSSPFLIRKDENVAQYTRRMAKIR
FT QENDMVSEEWAPIKGLISRLFAREALGENLKLRENFSKGKIRELMTSIEQQLKERGMGM
FT EVWHKAYQTSSPPEGLKGNLAQLLVSLTPPWTKSLPREVFRRLLGYDPIGSGSTPELTS
FT DEKYYYNVQSLEHNRIEYLRKLNEDDISIYANKYMVYSSTLLSTMLPDKVEWPEQRSMK
FT VQDAMNPFMVKGFKNKDMKPRFGEEILEEEQLQAKKSSTEKRRMQRKGQKLKLQRQAAD
FT GKFVVQRLN"
XX
SQ Sequence 3250 BP; 1008 A; 748 C; 797 G; 697 T; 0 other;
jn589002 Length: 3250 02-JAN-2012 Type: N Check: 1482 ..
1 tggcggccga caaggcggcc gaccgattgc gtgaggggat gcgacataca
51 cgcgaagaaa agcagcatcc aacctaacaa caagacgaac caaatcttcc
101 aaaacatgag tgacatattc aaccagcagg gactcaagtc caagttcaca
151 agtatcatca aaagcgaaaa ccaagaaagc aatgacattc tggttgtctt
201 caattcattt tccgatatta gtttggatac tgctgaggac atcgaataca
251 ctgatctcgg gagcgcacta cttgagcact cggtgaaagt ctttagaccc
301 aagccctatg atgagctaat taatgttcca ttcacagagg cagcatctcc
351 taggatgctg gacctgtatg aggaacagct tgggtctaag gatgtgagtc
401 tcccgattgg ggccggacaa atactaccca catacaagcc cagccatgag
451 ataacacctc ctctgacaac cttggccaac tccttggctt tcgagtatat
501 gaagtacata gagggctcat caaacccaga gtttgattca gccatttaca
551 gaactatcaa agaactgctc gaaatccagg gtgcaacaag gttctccact
601 ggctcactgc tgggccaggt gaagaggata gcggccgggc aagatgtggc
651 atacggccgt aatggtcacc ataagaacaa gagttttagg gagctaggac
701 tgacaccata caaggtcatg agctggcttg acgagtatat gcctataggg
751 gagggggaac ctgatttcaa actgacgaac actctagatt ggctcgtata
801 tacgccacaa gaggcagagt tgatgggtgt tccagattca ctaccagcta
851 taacgcattc ctcggcagct ggcttgccct ggttgggtaa gaagaaaggt
901 gaagttgcag tatcagctct cattactgca aacatgctga tcaaggacac
951 atcgcggatt ctaaaggaaa ctcttttctc gggctccaat gaccctttgg
1001 aggctaagag ggaaggagtt gctgcggaga ccgcgaagag taaaacgcga
1051 tcagcgggtc aattttcatc tgaaatactg aaaatgatta ccacggagta
1101 ctcttacacg atgatgggtc tgttgttccc aaaaggagag aggtatcaca
1151 gagctgacca cttggaaaaa actaggaaca tttggagtgc aagctatgtg
1201 acgcatctat tgggatcaat cgtttcggac caaccagcaa agcgcatgct
1251 caatgttctc acttctagcg aacctacccc atccctatca aagttttctc
1301 caactcaagg ggggatggat gctcttgtta atcgcattct cgaagccacc
1351 gacatcacag aactggtgta tgcagataac gcctatatgt acttccctag
1401 agaggatgtc tggtatagta tagacctcac caagggtgaa gccaactgta
1451 ccagggacat tgcaatgaca acagcaatgt acttgctaac tagggggtgg
1501 acgagcaacg aaggggtacc actatacaac tatacgtggg cttacctggc
1551 cctctatatg ataccctaca caactgtgga ctctataagc attttgaaga
1601 acttccagat taaaaatcca ggtcagggga gtggcaaccc atggactttc
1651 ctaaacaatc atgtattgac aaccatacta atgaacaagt ggagagccat
1701 gggccgacca aaacctacag cccaggttat tgagaagctt tcctcagaaa
1751 ctggtataga cttcaaagtt gagctagtgg tgcctgaatt caagaagaaa
1801 ctactggagg caagggagca ctcgctccct gttgaggata ggattaggcc
1851 tagaacgatt gtttccatgg acatgttggg gtgggatgta acacacactc
1901 agtatggttt caccccagtc ttggcaaagg aacgattgtt taagtcaata
1951 gcctgtccac aacctcctag tagcaccttc agctcccacg tagccaaaca
2001 agtccacaag tacatacagg acgtcgcact gttatacgtg ggtgggtggg
2051 catacccctg tatagcccaa accatcgaag gatacgccct gaaccattgg
2101 aacacaattg attctatgct tcgaaacaac cctaattatg acctagagaa
2151 agccttaacg aaggctgttg acacgagccc attccgtgag gtcatggagc
2201 taattaacat caggaaacca atgcacgagc aaaattatgc atcggtccta
2251 tacacaccaa aagacaggcc gcgcgtgcaa ccaaagagga tgatgtcaag
2301 cccgtttctc atccgaaagg atgaaaatgt ggcgcagtac acacgcagga
2351 tggcaaagat ccggcaggag aatgacatgg ttagtgaaga atgggctcca
2401 ataaaggggt tgatatctcg gcttttcgca cgggaagccc tgggtgagaa
2451 ccttaaactc agggaaaact tctccaaggg taagatacga gagctaatga
2501 ccagcataga gcaacaattg aaggagaggg ggatggggat ggaagtttgg
2551 cacaaagcat accagacatc ttcaccccct gaaggtctca aagggaatct
2601 ggctcaactg ctagtctcct taacaccacc ctggaccaag tctctcccaa
2651 gagaggtgtt taggaggctg ctgggatatg acccaatagg ttcagggagc
2701 accccagagc tcacaagtga tgaaaaatac tactataatg tccaaagtct
2751 ggaacacaat agaatagaat acctacggaa gcttaacgag gatgacatct
2801 ccatttatgc caacaagtac atggtgtaca gcagcacact actttccaca
2851 atgttgccag ataaggtgga atggcctgaa cagagatcca tgaaggttca
2901 agatgccatg aacccattca tggtcaaagg cttcaagaac aaagacatga
2951 agccaaggtt tggagaggaa atattagaag aagaacaact ccaagccaaa
3001 aagtcatcta cagagaaacg gagaatgcaa aggaaggggc aaaaactgaa
3051 gctgcagaga caagctgcag acggaaagtt cgtcgtgcaa aggttgaact
3101 gacaaaaccc cgggaggggg ggagttgaat ctcggtaatg gtagacccac
3151 cagcctctgg tttgagaccc aggctccttt gccactagac taaacgaaag
3201 tcggtcactc tcatcaggtg acagatccct aatttaaata ggggtggtac