ID JN589003; SV 1; linear; genomic RNA; STD; VRL; 3427 BP.
XX
AC JN589003;
XX
DT 02-JAN-2012 (Rel. 111, Created)
DT 02-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE Espirito Santo virus segment A, complete sequence.
XX
KW .
XX
OS Espirito Santo virus
OC Viruses; dsRNA viruses; Birnaviridae.
XX
RN [1]
RC Publication Status: Available-Online prior to print
RP 1-3427
RX PUBMED; 22171264.
RA Vancini R., Paredes A., Ribeiro M., Blackburn K., Ferreira D.,
RA Kononchik J.P.Jr., Hernandez R., Brown D.;
RT "Espirito Santo Virus: A new Birnavirus that replicates in insect cells";
RL J. Virol. 0:0-0(2011).
XX
RN [2]
RP 1-3427
RA Vancini R.G., Ribeiro M.T., Ferreira D.F., Kononchik J.P.Jr., Brown D.T.,
RA Hernandez R.;
RT ;
RL Submitted (16-AUG-2011) to the INSDC.
RL Department of Molecular and Structural Biochemistry, North Carolina State
RL University, 128 Polk Hall, Raleigh, NC 27695, USA
XX
CC GenBank Accession Numbers JN589002-JN589003 represent the complete
CC genome of Espiritu Santo virus.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3427
FT /organism="Espirito Santo virus"
FT /segment="A"
FT /mol_type="genomic RNA"
FT /country="Brazil:Espirito Santo"
FT /collection_date="01-Dec-2010"
FT /identified_by="Ricardo Vancini"
FT /note="passage in Aedes albopictus C6/36 cells"
FT /db_xref="taxon:1127767"
FT CDS 103. .3267
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AEW87521.1"
FT /translation="MNTSNEYLKTLLDPAQFIADIPDDIMIRHINRAETITYNLKTGAS
FT GTGLIVFYPNTPSSVAGFHYRWDAENSVWAFDQYIYTAQELKKSYDYGRLISGAVSVKS
FT SSIPSGVYALTGTFNAVWFQGTLSEVSNLNYDRILSITSNPLDKVGNVLVGDGLAVLSL
FT PQGFNNPYVRLGDESPSSLTSVTHITNTSQNLGYGGAFAVPQTTVAGQGTFFKEFNINV
FT DSVGPIDVTWSGLMTMQDEWTVTANYQPLNLSGTLIQGSMRTIIWSNVGVSNGTHYMNL
FT NEINVSFFHENPPPEPVAAIKVHITFGNNTNGESSMNVDGSFTFHVVGGATIGVNSPTV
FT MIGYQGVASGSTITLSGVNNYELVPNPALQKNLPMSYGTCDPTDLNYVKYILSNREKLG
FT IRSVMTLAQYAKMKMQMNIMTDYHVGDREASSFDFWHLLKQIKKLVVPVASTMLPQFAP
FT IIGAADNLANTVLGNSASGQPIGNSASGLPISMTRRIKSAHSADTPIGDSNWEPTRNPE
FT FNKLDVIYDVSHSSMALFPVIMMDNDQVVPSDPEELFIAVSLTESLRKQIPGIDTMPYY
FT TIGGHRVYNAVSNGRVSTAPFLTSDYILLPCYQLFDGKLATSKTPNKVTGTSHQLALYA
FT AEGLQKRGIMGKAPYAAFTGSVAGQSVGEVFGISLKSQLTDSLGIPLFGNSQGLPIQNL
FT HQLERLLDISGDVPRRTPRETPNHWTASSASVPFSNTNPFLNGEVDQERNVQFLPTNTN
FT PFLDAGQDVGGVPPQQMARIISDDTRNAFLEDGQSIPSSQEKIVTVHEFLLQNQELLEA
FT MFGLISRGHEKALVNMVTKAAVNIKTQAKDLTEERLARLEVKIQHLARQGIVLDPENVK
FT RAGRITQEDTQAAIIRSKDHQMRNKLRRVFLNNVSIGREYTEDEFVDFWIRQGFIPNGL
FT QISAWLREEDWSSPTPALSKRHYDSYLQMLGPSPDQGLVEQVRSMVDSVYDENGNKGPS
FT QVQARALSSSVRRLISQSLVTRPQPVPKVPVRKIEPIATGQGSNPERRAALERLQRARG
FT GESEMI"
FT mat_peptide 103. .1602
FT /product="preVP2"
FT mat_peptide 1603. .2271
FT /product="putative VP4"
FT mat_peptide 2272. .3264
FT /product="putative VP3"
FT CDS 1920. .2699
FT /codon_start=1
FT /product="putative VP5"
FT /protein_id="AEW87522.1"
FT /translation="MLSTIRRKAGNLQNTEQGDRHVTPACIVCSRRATKTWHYGEGSIC
FT RFHRLRCRTVSGRSFWHQPEIPIDGLPWDSSVWELTRIANPKPTPVGEASRHLRGRSKK
FT NPPRDSKPLDCKLGQRAFLKHKSILEWRSGPRKECTVPTNKYQPVSGRWARCWRSSTTA
FT NGENHLRRHPQCFSRGWPIHPKLSGEDSHGSRIPTTEPGASRGNVRAHQPRPRKSSGEH
FT GYQGRCEHQNAGQRSNRGKTGSARGEDPTSCKARDCT"
XX
SQ Sequence 3427 BP; 941 A; 903 C; 834 G; 749 T; 0 other;
jn589003 Length: 3427 02-JAN-2012 Type: N Check: 9372 ..
1 tggcggccga ccaggccgac ccagttgatg agtaagggga tactcagttg
51 cagcatgaac tccccaaaaa cccttttgaa aactatttca tgattgatga
101 aaatgaatac ctcaaacgag tacctcaaga ccctgttgga cccagcccaa
151 ttcatcgccg acatccctga cgacataatg attcgccaca ttaaccgcgc
201 ggagacaatc acctacaacc ttaagacagg tgcatcaggc accggtttga
251 ttgtcttcta cccaaacacc ccatccagcg ttgctgggtt ccattacagg
301 tgggacgctg aaaactcggt gtgggcgttc gaccaataca tatacactgc
351 acaggagcta aagaagtcct atgattatgg acgactcatc tcaggagcag
401 tgagtgtcaa gtcgagttcc ataccatcag gcgtctacgc ccttactgga
451 accttcaacg ccgtatggtt tcagggtaca cttagtgaag tctcaaacct
501 aaactacgat cggatcctat cgataacctc caatcctttg gacaaggtag
551 gcaatgttct ggttggtgac ggtctggccg tactaagcct gccacagggc
601 tttaataacc cctacgtcag gcttggcgac gagtcaccct cgtcactaac
651 cagcgtaacc cacatcacaa acacttccca gaaccttggc tatggggggg
701 ctttcgcagt tcctcaaacc acggttgcgg gtcaaggaac gttttttaaa
751 gagttcaaca ttaacgttga ctccgtcggg ccgatcgatg taacatggtc
801 gggactgatg acaatgcaag acgagtggac tgtaactgct aactatcagc
851 ctctgaacct atcaggaacg ctgattcagg gcagcatgcg gaccattatc
901 tggtccaatg ttggcgtctc caacggaacc cactacatga accttaatga
951 aataaacgtc tcattctttc atgagaatcc tcctcccgag ccggtagcag
1001 ctatcaaagt gcatatcact tttggcaaca acacgaacgg ggagagctcc
1051 atgaatgttg acgggtcttt cacctttcat gttgtgggtg gggccaccat
1101 cggcgtcaat tcacccacag ttatgattgg gtaccaggga gtagctagtg
1151 gctccactat tacccttagt ggagtcaaca actatgagct ggtgccaaac
1201 cctgctcttc agaagaatct accaatgtct tacggaacgt gtgaccctac
1251 agaccttaac tatgtcaagt acatcctgtc aaatcgggaa aaactaggta
1301 tcaggtccgt aatgacacta gcacaatacg cgaagatgaa gatgcagatg
1351 aacatcatga cggactacca tgtgggtgat cgtgaggcct ccagcttcga
1401 cttctggcac ctgctaaagc agatcaaaaa gcttgttgtc cctgttgcgt
1451 cgaccatgct accccagttc gctcctatta taggggctgc tgacaacctg
1501 gccaacacag tactgggcaa cagtgccagt gggcaaccaa ttgggaactc
1551 agcgagtgga ctaccaatat ccatgacaag gaggatcaag agtgcacact
1601 cagctgacac cccaataggt gatagcaact gggagcccac caggaacccc
1651 gagttcaaca agcttgatgt aatttatgat gtgtcacatt catccatggc
1701 tttgtttccc gttataatga tggacaacga ccaggtcgtc ccatctgatc
1751 ctgaggagct gttcattgct gtttcactaa cggaatccct caggaagcag
1801 atccccggca ttgacaccat gccctactac accataggag gacatcgtgt
1851 ctacaatgcc gtttcaaatg gtcgggtgtc caccgctcct tttttaacaa
1901 gcgactacat cctcctacca tgctatcaac tattcgacgg aaagctggca
1951 acctccaaaa caccgaacaa ggtgaccggc acgtcacacc agcttgcatt
2001 gtatgcagcc gaagggctac aaaaacgtgg cattatgggg aaggctccat
2051 atgccgcttt cacaggctcc gttgcaggac agtcagtggg agaagttttt
2101 ggcatcagcc tgaaatccca attgacggac tcccttggga ttcctctgtt
2151 tgggaactca caaggattgc caatccaaaa cctacaccag ttggagaggc
2201 ttctagacat ctcaggggac gttccaagaa gaaccccccg agagactcca
2251 aaccactgga ctgcaagctc ggccagcgtg cctttctcaa acacaaatcc
2301 attcttgaat ggcgaagtgg accaagaaag gaatgtacag ttcctaccaa
2351 caaataccaa cccgtttctg gacgctgggc aagatgttgg aggagttcca
2401 ccacagcaaa tggcgagaat catctcagac gacacccgca atgcttttct
2451 agaggatggc caatccatcc caagctctca ggagaagata gtcacggttc
2501 acgaattcct actacagaac caggagcttc tagaggcaat gttcgggctc
2551 atcagccgag gccacgaaaa agctctggtg aacatggtta ccaaggccgc
2601 tgtgaacatc aaaacgcagg ccaaagatct aacagaggaa agactggctc
2651 ggctcgaggt gaagatccaa catcttgcaa ggcaagggat tgtacttgac
2701 ccagagaatg tgaagagagc agggaggatt acacaagagg atacacaagc
2751 agcgatcatt agatccaaag accatcagat gagaaacaag ctccggagag
2801 tcttccttaa caacgtgtca atcgggcgcg aatacacaga ggatgagttt
2851 gtagactttt ggattcgaca gggatttatt cctaatggtc tccagatatc
2901 tgcatggcta agggaggagg actggtcaag ccctactcct gcactgtcga
2951 agaggcatta cgacagttac ctgcagatgc ttggcccaag ccctgaccag
3001 gggctagtcg agcaggtcag gtctatggtt gacagtgtgt atgacgaaaa
3051 cggaaacaaa gggccttccc aggtccaggc cagggcgctg tctagttcgg
3101 ttaggagact catctcccaa tcgcttgtca ctagacctca gcccgtgccc
3151 aaggtcccgg tgaggaaaat agaaccaatc gccactggcc agggatctaa
3201 cccggaaagg cgggccgcgc tcgagagact acagagagcg cgcggtggag
3251 aatcagagat gatctgattc actgtttggg taattcccgc acagcacaga
3301 ccccctggct aggggtaagg ggttttatgg tatagctgta cctatgccct
3351 agtcgctcga ctatagaagt cacttggtct cattagccaa gggaacctgc
3401 catcgaaagc agggcggcgt ccacccc