Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus genomic RNA6 for 20.6K major nonstructural protein and 36.4K protein, complete cds.
ACC No: AB000404
Dated: 2003-07-07 | Length: 2584 | CRC: 427691512
!!NA_SEQUENCE 1.0
ID AB000404 standard; RNA; VRL; 2584 BP.
XX
AC AB000404;
XX
SV AB000404.1
XX
DT 02-OCT-1997 (Rel. 52, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 4)
XX
DE Rice grassy stunt virus genomic RNA6 for 20.6K major nonstructural protein
DE and 36.4K protein, complete cds.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2584
RA Takahashi M.;
RT ;
RL Submitted (10-JAN-1997) to the EMBL/GenBank/DDBJ databases.
RL Mami Takahashi, National Institute of Agro-Environmental Sciences, Division
RL of Microbiology; 3 Kannondai, Tsukuba, Ibaraki 305, Japan
RL (Tel:0298-38-8301, Fax:0298-38-8199)
XX
RN [2]
RX MEDLINE; 97437493.
RX PUBMED; 9292026.
RA Toriyama S., Kimishima T., Takahashi M.;
RT "The proteins encoded by rice grassy stunt virus RNA5 and RNA6 are only
RT distantly related to the corresponding proteins of other members of the
RT genus Tenuivirus";
RL J. Gen. Virol. 78:2355-2363(1997).
XX
DR GOA; O36171.
DR SPTREMBL; O36171; O36171.
DR SPTREMBL; O36172; O36172.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2584
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /organism="Rice grassy stunt virus"
FT /lab_host="Oryza sativa"
FT /segment="6"
FT CDS 75. .614
FT /db_xref="GOA:O36171"
FT /db_xref="SPTREMBL:O36171"
FT /product="20.6K nonstructural protein"
FT /protein_id="BAA22533.1"
FT /translation="MSKSHSDVVGTVSGLNYRLFYDMIPDRISQKLRLREITDPKTCNA
FT SKIPLVLKAAEEVSRMDIDHDKDGYTKVQVKMPEYMKAYLEEMLSASNSTTTGISYSVF
FT LVYMQDKCGDWITEHYLKNVHSMSKQQLHELITGIIETFSSDDIEDEHYDDLICKIPAY
FT VYNIVLRYIDMSGLTT"
FT CDS complement(1528. .2505)
FT /db_xref="SPTREMBL:O36172"
FT /product="36.4K protein"
FT /protein_id="BAA22534.1"
FT /translation="MALLQKLGSSKVSSKRMSPAMIPLDSINQDLVDPQQEKDAKNKKE
FT GKKKDLDVSMDPLTGKLPLGKKKQVDTGGIAYLENALMQLDLHDFSFDSIRPRTKTFHM
FT KRQHFKISTVNSRFRLDVEKTGLFSKTLKYSRICTLCLAFLGIKNRAQGTISFTFRDLS
FT YLSENDQIDFKVKNRISKSFSAIASFPAPIFNDDLGNLICDFEIENASVNGVVIGDLLV
FT LLGIEQSDLPVCYEPQKAKIFEYKPLTEKGLNKISNFAGYVDNVLKAAINHREGEDDGF
FT STEGLGVLVHPRVKQIDNSIPIKSLENKPQKMLMRDGSYLDVNP"
XX
SQ Sequence 2584 BP; 837 A; 452 C; 445 G; 850 T; 0 other;
AB000404 Length: 2584 July 15, 2003 10:08 Type: N Check: 2082 ..
1 acacaaagtc ctgggcaatt acaaacaaga aaaacttaat taaatactaa
51 ggtttacttt ttcttcaaat aggtatgtct aaatctcatt ctgacgttgt
101 gggcactgtg tctggtctta attatagact attttatgat atgattcctg
151 ataggatatc tcagaaactc agattaagag agataactga tccaaagaca
201 tgcaacgcaa gcaagatacc cttagtgctc aaagctgctg aggaagtgtc
251 taggatggat atagaccatg ataaggatgg ctacacaaag gtccaggtca
301 aaatgcctga gtacatgaaa gcttacctgg aagagatgct cagtgcaagc
351 aactcaacta ccactggtat ctcctatagt gtgttcttag tgtacatgca
401 agacaagtgt ggtgactgga taacagaaca ttacctaaag aatgttcact
451 ctatgtcaaa gcaacaattg catgaactga ttactggaat aattgaaacc
501 ttcagttcag atgacatcga ggatgagcac tatgatgatt taatatgcaa
551 aattcctgct tatgtatata atattgtcct tagatacata gatatgagtg
601 gcttaacaac atgaaactca ttactcacca ttgcaagagg ctatagagag
651 atatataatg ttggcaataa caaacattat ataataagat aatgaattga
701 aaaaatgaaa atgaaacaaa acaaagtcta gcttgtatag atcataaaat
751 atgaacttat aattaataat caatgagaca acaataatta gaaccaatag
801 aaacgttgtc aataaaacta acatatagaa aatgaaggaa agaaaataat
851 taaaaaccgg aaaagagaaa agtgttgggg aaagaggagg taagaatggt
901 gagaaataag aaaaagggaa aaaagatgaa agggagtata cacaagtaat
951 aaataaatgt ataataagtt ccagataatg ctatatgaat aatttgagag
1001 gatatcatga aaacaaacta gtgaactaag aacaaaaaaa cagaaaagaa
1051 agaaaactaa aaaaatacta ctagcttcgg ctagtatccc attccatttc
1101 atcatatctt ggttcattcc ctactaggtg cataacgatc aattgggctt
1151 ctacattgtc agagggttct ctaatttcct actctggaga tctacttatt
1201 taaattaaaa ttaaattatg ttggatgctg gccgaagcca gtgagagtta
1251 cagcatgaca agggaaacaa acaacatata tcttgacaac tactaactat
1301 atttagttat ttgaattaac acaacattta ctcaatacca gttattccca
1351 tttttttgta ttttttgcaa ttatctcttt tccttgtttt tttgtttttt
1401 tgttttatct attattctac tttttttgtt ttttatatat tttttctctt
1451 tttttgtttt ttttgtctgt tttttttgtc ctgattccta ctctcctctt
1501 cccttagctt atttgttctt gtcccactta ggggttaaca tctagatatg
1551 agccatctct catcaacatc ttctgaggtt tgttctccag actttttata
1601 ggaatggaat tatcaatttg tttcacccta gggtgaacaa ggactcctaa
1651 accctctgtg ctgaacccgt catcttctcc ttcccgatgg tttatagcag
1701 ccttgaggac attatctaca tacccagcaa agttcgatat cttatttaat
1751 cctttctcag tgagtggttt atactcaaag atttttgctt tctgtggctc
1801 atagcagact ggcaggtcag attgttctat gccaagaaga accaatagat
1851 ctcctatcac cactccatta acagatgcat tctcaatctc aaagtcacag
1901 attagatttc ctaaatcatc attaaatatt ggtgctggaa atgatgctat
1951 tgcagaaaaa ctcttgctga ttctgttttt gaccttaaag tctatttgat
2001 cattctcgga caggtaagac aagtctctaa aagtaaaaga aattgttcct
2051 tgagctctat ttttgatccc tagaaaagcc agacacaatg tgcagattct
2101 actgtatttg agagtcttag aaaagagacc tgtcttctcc acgtcaagtc
2151 tgaatctgct attgacagtg cttattttga aatgctgtct tttcatgtgg
2201 aaggtttttg ttcttggcct aatgctatca aagctgaagt catgtaggtc
2251 cagttgcatt aaagcatttt ctaggtaagc aattcctcca gtgtctacct
2301 gtttcttttt ccccaggggt agcttaccgg ttaaaggatc catggaaaca
2351 tctagatcct tctttttacc ctccttctta ttctttgcat ctttttcctg
2401 ttgtgggtcc acaaggtctt gattaattga atcaagaggt atcatagcgg
2451 gtgacattct cttggaactc accttacttg aacctagctt ttggagtaaa
2501 gccatttttt tacagaatgt gaaaaaagat ttcctttatc aatatgtaag
2551 tttttcgctt ttcaaagatg cccagacttt gtgt