Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus genomic RNA, complete sequence of RNA2.
ACC No: AB010376
Dated: 2003-07-07 | Length: 4056 | CRC: 154654275
!!NA_SEQUENCE 1.0
ID AB010376 standard; RNA; VRL; 4056 BP.
XX
AC AB010376;
XX
SV AB010376.1
XX
DT 12-AUG-1998 (Rel. 56, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE Rice grassy stunt virus genomic RNA, complete sequence of RNA2.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-4056
RA Toriyama S.;
RT ;
RL Submitted (12-JAN-1998) to the EMBL/GenBank/DDBJ databases.
RL Shigemitsu Toriyama, National Institute of Agro-Environmental Sciences,
RL Microbiology; Kannondai 3, Tsukuba, Ibaraki 305-8604, Japan
RL (E-mail:storyam@niaes.affrc.go.jp, Tel:+81-298-38-8301,
RL Fax:+81-298-38-8199)
XX
RN [2]
RX MEDLINE; 98378059.
RX PUBMED; 9714257.
RA Toriyama S., Kimishima T., Takahashi M., Shimizu T., Minaka N., Akutsu K.;
RT "The complete nucleotide sequence of the rice grassy stunt virus genome and
RT genomic comparisons with viruses of the genus Tenuivirus";
RL J. Gen. Virol. 79:2051-2058(1998).
XX
DR SPTREMBL; O89170; O89170.
DR SPTREMBL; O89171; O89171.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4056
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /organism="Rice grassy stunt virus"
FT /isolate="IRRI"
FT /segment="2"
FT CDS 210. .812
FT /codon_start=1
FT /db_xref="SPTREMBL:O89170"
FT /gene="p2v"
FT /protein_id="BAA32247.1"
FT /translation="MSISIPASEYQSSKTYSQLLMTFRDMVSEEQYRVIKERMVENNKH
FT YYALDKFSQGVYDIKDMQILVADLSWLCAFDKSSDQRTRETLVMISKCVLDIMLSLKPE
FT VSQTKCFVCDKKSTYETDNLSVARLDDVSNRFSGGSVHYMVKLKEHDKVGLMSYIHELK
FT KIGGYRGWYRDGGKLRHEYIVYTDAKPIMREKFAPVC"
FT CDS complement(1381. .3849)
FT /codon_start=1
FT /db_xref="SPTREMBL:O89171"
FT /gene="p2vc"
FT /protein_id="BAA32248.1"
FT /translation="MGLLVITFALALLELSETKSLYTQVIYHDEGDRITSSFSCNYYDC
FT NEGISICSRARYTSGYYLEKTGLNTAGLCRTDTTKCCGKMDKFSDNVILRSTSIRRVDD
FT IFINECNRWILRRHVKMTIKTTPIDTKDMDSRSLRKGTYDQFILSAESLEVCVHKNGEY
FT DSKIIVKCIDGILTSSEKNCKLWIDHTEFEFTDCTSRQLPLYTDVVNVAFNDVYRSVKC
FT EATNICSMYDRMDFWLRLKHWDCNKGFVWFLYSGIALIIITVIFTIIGLIKYYLIIVPT
FT NFVFRFIKKLIPNPFRLLKRRRSDYNAHELVRVKQDELSNLADENVKDVDSGKGKTLPT
FT RYRMRDGSYLTVGIILVFLPLVLGSCRDGVDSITSLSTCNSYACRSVTTINLKFRSIGD
FT ETCLSFKDANLKIRVLGISMRCNSRVIYYTRKYKYVITRDDYKCFTGPDCSLNPPKSIW
FT DDEEQYLHHDYCKYENVGVFSCGVPFIRSSHWQRMKVESGDKLICSAEECQEFQPYIVL
FT VITMGTNQTIAEISSSVYKGNGYTMTLDSTTPVLLPTKFVRCGSELFKVNFNDLGDLSD
FT DHYGSLQCPDHDSAYELSKKCEIKYQHIYEHTSNIMVDSGDSKLTGTNTTNNDLEHLEP
FT LFGGYQISTDQMWPITIQIKTLKELVQEHESDFVGSISKCSIKGVSRLIGGAIINLYIE
FT SERIGWGLLTCEDLSSFRFNVEGLGFQKFSKHISVYTHTSSDVRVNCNMTTGRGVRRVV
FT CETSLREHTIEVSSDKNNIENGMVQFRSDQPLVKFLIEFVEDNPKTSIVSASVVIMYVS
FT RILIGKVNNK"
XX
SQ Sequence 4056 BP; 1353 A; 748 C; 661 G; 1294 T; 0 other;
AB010376 Length: 4056 July 15, 2003 09:22 Type: N Check: 7805 ..
1 acacaaagtc ctgggcaaaa gaaaagcaaa ataaccaact atagattagc
51 caaaaccttt ttgtttaaac agttagtaat ttataagttt taatttataa
101 gtttaaattt ataagtttta attcataact taagatttaa aatttataat
151 ttataacata ctaattaatc ttaagtatat tgtatttgat ttagtagagt
201 gtagcaaata tgtctatttc aataccagca agtgaatatc aaagtagcaa
251 gacttatagt caactactca tgacttttag agacatggtc tctgaagagc
301 aatatagagt aatcaaagaa agaatggttg aaaacaataa gcattactat
351 gctctagata aattctcgca gggtgtttat gatataaaag acatgcagat
401 attagttgca gacttgtcat ggctttgtgc ttttgataaa tcttcagatc
451 aaagaactag agaaacattg gtaatgatta gcaagtgtgt tttagatatt
501 atgctgagcc tgaaacctga agtcagtcaa acaaaatgct ttgtttgtga
551 caagaaatca acatatgaga ctgataattt atcagttgct aggcttgatg
601 atgttagcaa taggttctct ggtggatctg tgcactacat ggtgaagctc
651 aaagaacatg ataaggttgg actcatgtca tatatacatg aactgaagaa
701 gattggaggg taccgtggtt ggtacagaga tggtggcaaa ctaagacatg
751 aatatattgt ctatactgat gcaaaaccca taatgagaga gaagtttgca
801 ccagtctgct gagatgtaaa agagggtgaa ggaatactag taattgacag
851 aaaaacctaa aaaaacataa aaaagacaaa aaacaaaaaa acaaaaaacg
901 cagaaaacaa aaaaacacaa aaagagaaga agaaaaacaa cacaaaagcc
951 ataagtggaa ccaatgtaaa aatgatggag aaatatgaga taaataaagg
1001 gaagaaaggt aggtaaagat aaaaggagtg aaaatatgcc atttaaagaa
1051 gtagtaataa gagggaaaaa cacattgata ataaaaaaat gtttaaagtg
1101 aaatagcaaa atgtccttcg ggacatatcc gagatattgt gcaccggatt
1151 cacaccgaag tgtgactttc ttttatcttt aatgtctaaa tttgattctt
1201 tccttagttc tttgtatgtc ccaacatact gtgactccca cattttttta
1251 tgatatttcc ctcttcctga tatttgtttt attcccgtca catagtttct
1301 tatgatttca atctctccct tctgatcact gaatcacaat tcatgataac
1351 tgctggcatc ttgtggatag attcattcat ttatttattg tttactttcc
1401 caatgagaat tctagagaca tacatgatta caacacttgc agagactatg
1451 ctggtctttg ggttgtcttc cacaaactca attaagaatt tgacaagtgg
1501 ttgatctgat ctaaactgca ccattccatt ctctatattg ttcttatcgg
1551 aggaaacttc aattgtgtgt tccctaaggc ttgtttcaca aaccactctt
1601 ctcactcctc ttcctgttgt catgttgcaa ttgactctaa catcactact
1651 tgtgtgggtg tacactgata tatgttttga gaatttctga aaccctaagc
1701 cttcaacatt aaacctgaat gatgatagat cctcacaagt aagcaatccc
1751 caaccaattc tctcactctc aatataaaga ttgattatgg ctcctccaat
1801 caacctggaa acacccttaa tactacactt cgatattgaa ccaacaaaat
1851 cactttcatg ctcttggacc aattccttta gtgttttgat ctgtatggtg
1901 attggccaca tttgatcagt tgagatttga taaccaccaa acaaaggctc
1951 tagatgttcc agatcattgt tagttgtatt agttcctgta agtttgctat
2001 ctccactatc taccataata ttagaagtgt gttcataaat atgttggtac
2051 ttgatttcac acttcttaga taattcatag gctgaatcgt ggtcaggaca
2101 ctgaagtgaa ccgtaatggt catcactcaa gtcacccaag tcgttaaaat
2151 tgactttaaa caattcacta ccacacctta caaattttgt aggtaataaa
2201 actggagttg ttgagtctaa agtcattgtg tatccattgc ctttataaac
2251 tgaggaacta atctctgcta tggtttgatt tgtacccata gtgattacca
2301 agacaatgta tggttggaat tcttgacatt cttctgctga acatattaac
2351 ttatctccac tctcaacctt cattctctgc caatggctag atcttatgaa
2401 aggaactcca caggaaaaga cccccacatt ctcatacttg caataatcat
2451 gatgtagata ttgttcctca tcatcccaga tgctctttgg aggatttaag
2501 ctacaatctg gaccagtgaa gcatttataa tcatctcttg taatgacata
2551 cttatacttt ctggtgtagt aaatcactct tgagttacat ctcatgctaa
2601 tccctagaac acgtattttg agattagcat ctttaaaaga taaacatgtc
2651 tcatcaccta ttgatctaaa tttcaaattt atagttgtga ctgatctgca
2701 tgcataggaa ttgcaagtgc taagagaggt tatgctatca acaccatctc
2751 tgcaagaacc tagaacgagg ggaagaaata ccaaaataat tccgactgtt
2801 aaatatgaac catctctcat acgataccta gttggtaaag ttttaccctt
2851 accagaatcc acatccttga cgttctcatc tgctagattg cttaattcat
2901 cctgtttcac ccttactaac tcatgagcat tgtagtcaga tctcctcctt
2951 ttcagtaatc tgaaggggtt tggtatcaat ttctttataa acctaaagac
3001 aaaatttgtt ggcactatta tcaagtaata cttaataagc cctattatgg
3051 tgaaaattac tgtgattatg atcagtgcaa ttcctgagta aagaaaccag
3101 acaaatcctt tattacaatc ccaatgtttt agtctcagcc aaaaatccat
3151 cctatcatac attgaacaaa tgtttgtcgc ttcacacttc acactacgat
3201 aaacatcatt gaaagctaca ttcacaacat ctgtgtatag tggcagctgt
3251 cttgaagtac aatcagtaaa ttcaaattca gtgtggtcta tccatagttt
3301 gcagtttttc tcagaacttg ttagtatacc atcaatgcac ttcactatta
3351 tcttagaatc atattctcca tttttgtgaa cacacacttc taaggattca
3401 gcagaaagta taaactgatc ataagtccct tttctcaaag atcttgagtc
3451 catatccttc gtatcaattg gtgttgtctt aatcgtcatt ttcacatgcc
3501 ttctcagtat ccacctgtta cactcattaa tgaagatatc atcaaccctg
3551 cgtatagatg ttgatctcag tattacattg tcgctaaact tatccatctt
3601 accacagcac tttgtagtat ctgttctaca caaaccagct gtgtttagtc
3651 ctgttttctc caaatagtat ccagaagtat acctggctct ggagcaaata
3701 gaaattcctt cattacagtc ataataattg cagctaaatg atgaagtgat
3751 cctatcacct tcatcatggt agataacttg tgtgtacaga gacttggttt
3801 cggatagctc tagcaaagct agagcaaatg tgatcacaag caaccccatt
3851 cctatacagg aacaaatggt ctattataac caattaatgg gtggtgaatg
3901 tcactaatag accactggtt gttagttgtg aaaacaattc tgattgaagt
3951 tgaataaaaa atcctcataa atgaaacaaa taagcaagta taaaacaaag
4001 gtcttccttg actttaagaa atgtgtttgt tttacaaata tgcccagact
4051 ttgtgt