Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus RNA, segment 4, complete sequence.
ACC No: AB023778
Dated: 2003-07-07 | Length: 2909 | CRC: -192544008
!!NA_SEQUENCE 1.0
ID AB023778 standard; RNA; VRL; 2909 BP.
XX
AC AB023778;
XX
SV AB023778.1
XX
DT 05-NOV-1999 (Rel. 61, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 5)
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DE Rice grassy stunt virus RNA, segment 4, complete sequence.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-2909
RA Shirako Y., Miranda G.J.;
RT ;
RL Submitted (16-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and
RL Environmental Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5800-5192, Fax:81-3-5800-5192)
XX
RN [2]
RA Miranda G.J., Azzam O., Shirako Y.;
RT "Comparison of nucleotide sequences between northern and southern
RT Philippine isolates of rice grassy stunt virus indicates occurrence of
RT natural genetic reassortment";
RL Virology 266:26-32(2000).
XX
DR SPTREMBL; Q9QNA1; Q9QNA1.
DR SPTREMBL; Q9QNA2; Q9QNA2.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2909
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /organism="Rice grassy stunt virus"
FT /isolate="South Cotabato"
FT /segment="4"
FT CDS 228. .725
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9QNA2"
FT /gene="p4v"
FT /protein_id="BAA86107.1"
FT /translation="MANLFFSTPQELRILNYIITRNTVQFNWTIPKNSDNPIIYTTLLQ
FT NTKDFYFTELRSKDLNTEMLGLCIKLIIKVVIKINQGINIPLEDVFKKIYDDRGRNIYL
FT YTNFSDKDLERKVNQYVHCASLKLPIDFENHPLAPTHVLLWFTLIEYAQRTTRGTFQGV
FT LE"
FT CDS complement(1237. .2814)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9QNA1"
FT /gene="p4vc"
FT /protein_id="BAA86108.1"
FT /translation="MWNSQYVKTNNNNERESIQRKLNKAKKDKSVFHGIDLDYSLDDGM
FT GYQVVDVSRCLSPWFGIRVIQELCSMHKLHITRELETLDVNGGVKYMYEYYKNLELVPA
FT SKNCGIIGLFKMSEPFKLFGKNCSVVASRKNKQDNFRKYILWESMNDLIVLSAYRSDLK
FT EFRREALEAALDVLDERDYEYTPFTVPNYHLSDSGKVDPETKLETKSKMFQMKYEVSRS
FT KHGDGIRGEDMWILRGQAFAVLVDGDDQFRDPYIIRKNDEENNHDDEVSNDGGQTKLII
FT YDRLQFTNRNLKLKVVVGNQFFLLVTISFVDLMNFEMKTMWSVCLHMAVRLIHVPVPRL
FT LDTMNDSMPLNTLPVANNMNFPIILDLHTVAKSFISMGVDAIYDLNDATVSLILSVVDR
FT YTNEVFYSSSASSTTSDDFNVGFMDPGEWPQLNEDGSMSDFSEGIDLLGAEVQLYLLIR
FT ENLENVEEELRNIDATGQTNVPYKIRLVTRTFSGYIILKGDEVHRWILMMNNITSRPAL
FT HCKGFLTL"
XX
SQ Sequence 2909 BP; 934 A; 582 C; 435 G; 958 T; 0 other;
AB023778 Length: 2909 July 15, 2003 09:22 Type: N Check: 8525 ..
1 acacaaagtc ctgggcacca tagaaagcga ataaccaacc tattgaacaa
51 aattgctttt taaatattga ttagattata tattctgtca actgctaatt
101 taagttcaaa ctcaaatctt gataaatcct attttagcat tttaattaga
151 tccatatttc caaaataaat aaagagtgca aaaaaatctt aaatagtgag
201 aagctgccac tcaaggtgtt tgccagtatg gcaaacttat tcttcagtac
251 tccacaggag ctgaggattt taaattatat aataactagg aatactgtac
301 aatttaactg gacaattcct aaaaattctg ataaccctat tatttacaca
351 acactcttgc agaacactaa agatttctat ttcacagagt tgagaagtaa
401 agatttaaac actgaaatgc tgggcttatg catcaagtta ataattaaag
451 tagtgatcaa aataaaccaa ggaatcaata taccattaga agatgtgttc
501 aagaaaattt atgatgatag aggtagaaac atttatttat atacaaattt
551 tagtgataaa gacttagaaa gaaaggttaa ccaatatgta cattgtgcat
601 ctcttaaact acctatcgat ttcgagaacc acccactagc tcccacacac
651 gttcttctct ggtttactct cattgagtac gctcagagaa ccactagggg
701 tactttccaa ggtgttctag aatgagaaac caagctctgg ggttaaaact
751 attagcaaga ttccaaaata tcgactacgg tcgatatccc aggtaatttg
801 ttggatgatg gccgaagcca tgtttttttg ttgatcatct tcagaatact
851 ccatgctcag ctccaagatt tactatatgc acacacaggc tttgttgatc
901 atgtatttaa tttttttcta gctttaatct tattactatc tggtgactaa
951 aactccaata gtcgtacata tttcagactg gttacacatt catacttatg
1001 gctaaatggt taacttactc agtatttatt taataggtgc ctgtttactg
1051 atttctgatt gggggggttg cttagtcaat atgtgaaact cttagttcag
1101 atggaacaag tgcatagggg gggcatttag cactgtccaa cttactttga
1151 gttctataat tgatctcaaa caatccttct ctcagaaaat agctacttca
1201 ctattcatgt aaatttatct acttatagtt ggttagttat aatgttagaa
1251 atcccttaca gtgtagtgct ggtctagatg tgatgttatt catcattaga
1301 atccatctgt gcacttcatc ccctttaagg ataatgtaac cactgaaggt
1351 tctagttact agccttattt tatatggcac attagtctga cctgtcgcat
1401 ctatgttcct cagttcttcc tcaacattct caagattctc ccttatcaac
1451 aagtacaatt gaacttctgc acctaataga tcaattccct ctgaaaaatc
1501 tgacatgctc ccatcctcat taagctgggg ccattcccct ggatccatga
1551 atccaacatt gaaatcgtca gaggttgttg aggaagctga tgacgagtaa
1601 aacacttcat tagtgtacct atcaacaaca ctgagaatca gacttacagt
1651 agcatcattt aaatcatata tagcatcgac ccccatgcta ataaaagact
1701 tagcaactgt gtgtaaatcc agaattatag gaaagttcat attattggct
1751 actggcaaag tgtttagtgg catagaatca ttcatagtat ctaacaatct
1801 agggactgga acatgaatta gtctgacggc catgtgcaag cacactgacc
1851 acattgtctt catttcaaaa ttcattagat ctacgaagct tatagtcacc
1901 aagaggaaga attgattccc caccactact tttaacttaa ggtttctatt
1951 tgtaaattgc aatctgtcgt aaataatcaa cttagtttga cctccatcat
2001 tactaacttc atcatcatga ttattttctt catcattctt ccttattata
2051 tagggatctc taaactggtc atcgccatcg acgaggactg cgaaagcttg
2101 acctctcaat atccacatgt cttctcctct aattccatca ccatgtttgg
2151 atctagagac ttcatacttc atttgaaaca tcttagattt agtttctaac
2201 ttagtttcag gatctacctt accagaatca cttagatgat aattagggac
2251 agtgaatgga gtgtattcat aatctctctc atctaataca tctagtgcag
2301 cctctagagc ctctcttcta aattctttta aatcacttct ataagcactt
2351 agaacaatca aatcattcat cgattcccac aatatgtatt tcctgaaatt
2401 gtcctgctta ttctttctac ttgcaacaac actacaattc ttaccaaata
2451 atttaaaggg ctcactcatt ttaaataggc caataatgcc acaattcttg
2501 ctagctggca ctaattccaa attcttataa tactcataca tatacttaac
2551 accaccatta acatctaatg tctccaattc tctagttatg tgcagtttat
2601 gcatagaaca taattcctgg ataacacgaa ttccaaacca tggtgatagg
2651 cacctagaga catcaaccac ttgataaccc ataccatcat ctagtgaata
2701 atctagatca atgccatgaa acacagactt atctttcttg gctttgttta
2751 acttacgttg gatgctctct ctctcattgt tgttgtttgt cttcacatat
2801 tgggaattcc acatatttaa aagaggaaaa agaaaaaaga aaaaagaaaa
2851 ccaaagttta tactaatgta gtttttttct ctttttcaaa ttttgcccag
2901 actttgtgt