Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus RNA, segment 5, complete sequence.
ACC No: AB023779
Dated: 2003-07-07 | Length: 2704 | CRC: 1110925033
!!NA_SEQUENCE 1.0
ID AB023779 standard; RNA; VRL; 2704 BP.
XX
AC AB023779;
XX
SV AB023779.1
XX
DT 05-NOV-1999 (Rel. 61, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 5)
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DE Rice grassy stunt virus RNA, segment 5, complete sequence.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-2704
RA Shirako Y., Miranda G.J.;
RT ;
RL Submitted (16-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and
RL Environmental Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5800-5192, Fax:81-3-5800-5192)
XX
RN [2]
RA Miranda G.J., Azzam O., Shirako Y.;
RT "Comparison of nucleotide sequences between northern and southern
RT Philippine isolates of rice grassy stunt virus indicates occurrence of
RT natural genetic reassortment";
RL Virology 266:26-32(2000).
XX
DR GOA; O36170.
DR SPTREMBL; O36170; O36170.
DR SPTREMBL; Q9QNA0; Q9QNA0.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2704
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /organism="Rice grassy stunt virus"
FT /isolate="South Cotabato"
FT /segment="5"
FT CDS 104. .679
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9QNA0"
FT /gene="p5v"
FT /protein_id="BAA86109.1"
FT /translation="MSGMNSEEYMVLNTMLQTVGCDAYELLKKTPGCEKAVYLFCCKST
FT MIRELVTVIRSIDENTINGQLLYSVCRELLKLMYLEDGSENIAIIKPLLLLLTEKNKIV
FT NKVSTKNCWICSLYKRELAEGSPLVVTKSKTEVKHFADSVNVGFVTVQHGSELPDLPMT
FT IYKPVKEQKHQYGFLSDSELITADYVRV"
FT CDS complement(1558. .2535)
FT /codon_start=1
FT /db_xref="GOA:O36170"
FT /db_xref="SPTREMBL:O36170"
FT /gene="p5vc"
FT /protein_id="BAA86110.1"
FT /translation="MGKVQFGDGHWANNKEWSELLSEIFSKIRASIDGFANATADLAAG
FT LEYQAFNPEKILRKLIASSTSLDDFVKDMRDLLVARYTRGTSFLFNAKNSIEKAKDKKK
FT AEAIQVLINRYGVKKNAGDNAVDQATLGRISQVLAYMALRVALQITDYHKPIIPLRPIS
FT TVDIKNAIIDVVPQFLYLKADQLDSKTNSEAALYVIHLCYQVCVSERIMTKAQKDKHSV
FT HTKSAMITHCMGFVNLAMDNSSVVSDDKIAGRRMISGPWGLQETALDATGCACIIDVVD
FT FCCRGHKVTDAVAPVRLFRLAIECIKDTADLKDAGVKLKTLVDK"
XX
SQ Sequence 2704 BP; 886 A; 517 C; 431 G; 870 T; 0 other;
AB023779 Length: 2704 July 15, 2003 09:23 Type: N Check: 4900 ..
1 acacaaagtc ctgggcaatt atagcaaaac aacaccttct ttaagtactc
51 agctttcctt taaaccacat tacttcagaa ttctctagca cattgatcgt
101 tatatgtctg gcatgaattc agaagagtac atggtgctca acaccatgct
151 tcaaacagta gggtgtgatg catacgaact actgaaaaaa actccaggtt
201 gtgagaaggc tgtgtattta ttctgttgta agtctactat gatacgtgaa
251 ttagtgactg tgatcaggag cattgatgaa aacaccatca acggtcaatt
301 gctatattct gtttgcagag agctgctaaa actaatgtat ctggaagatg
351 gctctgagaa catagcaata atcaaaccat tgctactgtt actcactgag
401 aaaaataaga tagtgaacaa ggtctccaca aagaactgct ggatctgtag
451 cttatacaaa agagagttgg cggaagggtc ccctctagtt gttactaaga
501 gtaagactga agtgaaacac ttcgcggact cagtgaatgt tggttttgtc
551 actgttcaac atggttcaga gttaccagac ttgcctatga caatatataa
601 gccagttaaa gaacagaagc accaatatgg gtttctgtct gactctgagc
651 taatcactgc agattacgtt agagtctagt gattggacta aaattgagtg
701 tattagtaaa gtattatatc ttcttgtctt tgaactctca gtcaaaagag
751 tttgagacta atgaacttca taatacactt gatgtggatg aaaaaaacac
801 aaaaaacaaa aaaagaaaaa aagaagaaaa aaagaaaaaa accaaaaaaa
851 tagaaacaaa taaagaaaca ataacatagg taagtagtaa ataagcaaca
901 ccagcttcgg ctggtatcca tcaatcaatg attttggaga caaatcagtg
951 atcatgactt caaaattgtc cagattaaca tttaaggttt ctgttcttct
1001 gtcttcccaa ctaatgttca ttaatgagtt tgaagttgta gatttactta
1051 cattttctga tttgaatgag aatttgtact gggataacag ccgaagctgt
1101 ttttgttttt tttgattttt ttgtttttct gtgttttttt ggtgttttta
1151 tgttttccat attttgtgat ttttttgctt ttattattat taacatctag
1201 acacttttag cttcgttacc caccctatga tgattataat atattaagac
1251 ttactcctac tttaagtgac cataattgta catacatatt aactaacacc
1301 atactacaaa tgcatataag aacatattaa ctactcacac taatgacctt
1351 acaatggact actacaacta agtacagtat ataatgagta tataatccta
1401 taacctccat taatgctaga ttactattac tatttattat tatttgttta
1451 taacataaac ctaacaccca actcccattg ctatgtaatt tactaattta
1501 tattatatta tatgattcac actatacact acgctaaagg ctaatgtaga
1551 aaatgaatca cttatcaacc agagtcttca atttaactcc agcatccttc
1601 agatcagctg tatcttttat gcactcaata gctaatctga acagcctaac
1651 tggcgccaca gcatctgtta ctttgtgtcc cctgcagcag aaatcaacaa
1701 catcaatgat acatgcgcag cctgtggcat ctagagcagt ttcctgtagt
1751 ccccatggac ctgagatcat ccttctacca gctatcttat catcagacac
1801 tactgaagaa ttatccatag ccaggttgac aaaacccatg cagtgtgtta
1851 tcattgctga cttagtgtgg acactgtgct tatccttctg agctttagtc
1901 atgattcttt cagacacaca gacttggtaa cacaaatgga ttacatacag
1951 agctgcctct gagttggtct ttgaatcaag ttgatctgct ttaagatata
2001 aaaattgtgg aacaacatca atgatagcat tcttaatatc aacggtacta
2051 atgggtctca atggtatgat tggcttatga tagtctgtga tttgtaaagc
2101 aactctcaat gccatatatg ccaacacttg acttatcctt cccaaagtgg
2151 cttgatcaac agcattgtct ccagcattct tttttactcc gtacctattt
2201 atcagtacct gaatagcttc tgccttcttc ttatccttag ctttctcaat
2251 tgagttttta gcattgaaca agaagctagt tcctctggtg tacctggcca
2301 ccaagaggtc acgcatatcc ttaacaaagt catccaatga agttgaggat
2351 gcaatcaact tcctcaaaat cttttcagga ttgaaagcct gatactccaa
2401 tcctgcagcc aaatcagctg tagcattggc aaatccatct atagatgctc
2451 tgatttttga aaatatttct gacaacaact cagaccattc cttgttattt
2501 gcccagtgac catctccaaa ttgcacttta cccatcttac actattattt
2551 ttactaaaac aaaactgatt tgttatatta tataatagga atatataaaa
2601 aaccaatata ttagataata ataaaatact taaagtacac aaaaagggtt
2651 ttcttaatgt atgatgaatg ttaactttct tcaaaagatg cccagacttt
2701 gtgt