Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus RNA, segment 6, complete sequence.
ACC No: AB023780
Dated: 2003-07-07 | Length: 2590 | CRC: -1591756897
!!NA_SEQUENCE 1.0
ID AB023780 standard; RNA; VRL; 2590 BP.
XX
AC AB023780;
XX
SV AB023780.1
XX
DT 05-NOV-1999 (Rel. 61, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 5)
XX
DE Rice grassy stunt virus RNA, segment 6, complete sequence.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2590
RA Shirako Y., Miranda G.J.;
RT ;
RL Submitted (16-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and
RL Environmental Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5800-5192, Fax:81-3-5800-5192)
XX
RN [2]
RA Miranda G.J., Azzam O., Shirako Y.;
RT "Comparison of nucleotide sequences between northern and southern
RT Philippine isolates of rice grassy stunt virus indicates occurrence of
RT natural genetic reassortment";
RL Virology 266:26-32(2000).
XX
DR GOA; O36171.
DR SPTREMBL; O36171; O36171.
DR SPTREMBL; Q9QN99; Q9QN99.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2590
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /organism="Rice grassy stunt virus"
FT /isolate="South Cotabato"
FT /segment="6"
FT CDS 75. .614
FT /codon_start=1
FT /db_xref="GOA:O36171"
FT /db_xref="SPTREMBL:O36171"
FT /gene="p6v"
FT /protein_id="BAA86111.1"
FT /translation="MSKSHSDVVGTVSGLNYRLFYDMIPDRISQKLRLREITDPKTCNA
FT SKIPLVLKAAEEVSRMDIDHDKDGYTKVQVKMPEYMKAYLEEMLSASNSTTTGISYSVF
FT LVYMQDKCGDWITEHYLKNVHSMSKQQLHELITGIIETFSSDDIEDEHYDDLICKIPAY
FT VYNIVLRYIDMSGLTT"
FT CDS complement(1534. .2511)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9QN99"
FT /gene="p6vc"
FT /protein_id="BAA86112.1"
FT /translation="MALLQKLGSSKVSSKRMSPAMIPLDSINQDLVDPQQEKDAKNKKE
FT GKKKDLDVSMDPLTGKLPLGKKKQVDTGGIAYLENALMQLDLHDFSFDSIRPRTKTFHM
FT KRQHFKISTVNSRFRLDVEKTGLFSKTLKYSRICTLCLAFLGIKNRAQGTISFTFRDLS
FT YLSENDQIDFKVKNRISKSFAAIASFPAPIFNDDLGNLICDFEIENASVNGVVIGDLLV
FT LLGIEQSDLPVCYEPQKAKIFEYKPLTEKGLNKISNFAGYVDNVLRAAINHREGEDDGF
FT STEGLGVLVHPRVKQIDNSIPIKSLENKPQKMLMRDGSYLDVNP"
XX
SQ Sequence 2590 BP; 828 A; 463 C; 447 G; 852 T; 0 other;
AB023780 Length: 2590 July 15, 2003 09:24 Type: N Check: 9084 ..
1 acacaaagtc ctgggcaatt acaaacaaga aaaacttaat taaatactaa
51 ggtttacttt ttcttcaaat aggtatgtct aaatctcatt ctgacgttgt
101 gggcactgtg tctggtctta attatagact attttatgat atgattcctg
151 ataggatatc tcagaaactc agattaaggg agataactga tccaaagaca
201 tgcaacgcaa gtaaaatacc cttagtgctc aaagctgctg aggaagtgtc
251 taggatggat atagaccatg ataaggatgg ctacacaaag gtccaggtta
301 aaatgcctga gtacatgaaa gcttacctgg aagagatgct cagtgcaagc
351 aactcaacta ccactggtat ctcctatagt gtgttcttag tatacatgca
401 agacaagtgt ggtgactgga taacagaaca ttacctaaag aatgttcact
451 ctatgtcaaa gcaacaattg catgaactga ttactggaat aattgaaacc
501 ttcagttcag atgacataga ggatgagcac tatgatgatt taatatgcaa
551 gatccctgct tacgtataca atattgtcct tagatacata gatatgagtg
601 gcttaacaac atgaaactca ttactcacca ttataagagg ctatagagag
651 atatataatg ttgtcaataa caaacattat ataataagat aatgaataga
701 aaataaaaaa atgaaacaat acaaagtcta gcttgtgtag ctcataaaat
751 atgaacttat aattaataat caatgagaca tcaataatta gaaccaataa
801 aaacattatc aatgaaacta acatatataa aatgaaggaa agaaaataat
851 taaaaacctg aaaagagaaa ggtgttgggg aaagaggagg taagaatggt
901 gagaaataag gaaaggaaaa gaagatgaaa gggagtaaat acaagtaata
951 aataaatgaa taataagttc cagataatgc catatgaata atttaagaag
1001 atatcatgaa aacaaactag tgaactaaga acaaaaaaac agaaaagaaa
1051 gaaaactaaa aaagtactac tagcttcggc tagtatccca ttccatttca
1101 tcatatcttg gttcattccc tactaggtgc ataacgatca attgggcttc
1151 tacattgtca gagggttccc taatttccta ttctggagat ctacttattt
1201 aaattaaaat taaattatgt tggatgctgg ccgaagccag tgagtgttat
1251 accatgacaa gggaaacaag caacatttat cttgacaact actaactaca
1301 ttaagttatt tgaaacaaca caacattcac tcaccagtta ttcccatttt
1351 tttgtatttt tttgcagtta tctcttttcc ttgttttttt gtttttttgt
1401 tcttttgttt tatctattat tctacttttt ttgttctttt catatttttc
1451 tctctttttt tgtttttttg tctgtctttt ttagtcctga ttcctgctct
1501 cctcttccct tagtttattt gttcttgtcc cacttagggg ttaacatcta
1551 gatatgagcc atctctcatc aacatcttct gaggtttgtt ctccagactt
1601 tttataggaa tggaattatc aatttgtttc accctagggt gaacaaggac
1651 tcctaaaccc tctgtgctga acccgtcatc ttcaccttcc cgatggttta
1701 tagcagccct gaggacatta tctacatacc cagcaaagtt cgatatctta
1751 tttaaccctt tctcagtgag tggtttatac tcaaagattt ttgctttctg
1801 tggttcatag cagactggca ggtcagattg ttctatgccg agaagaacca
1851 atagatctcc tatcaccact ccattgacag atgcattctc aatctcaaag
1901 tcacagatta gatttcctaa atcatcattg aatattggtg ctggaaatga
1951 tgctattgca gcaaaactct tgctgattct gtttttgacc ttaaagtcta
2001 tttgatcatt ctcggacagg taagacaagt ctctaaaagt aaaagaaatt
2051 gttccttgag ctctattttt gatccctaga aaagccagac acaacgtgca
2101 gatcctgctg tatttgagag tcttggaaaa gagacctgtc ttctccacgt
2151 caagtctgaa tctgctatta acagtgctta ttttgaaatg ctgtcttttc
2201 atgtggaagg tttttgttct tggcctaatg ctatcaaagc tgaagtcatg
2251 taggtccagt tgcattaaag cattttctag gtaagcaatt cctccagtgt
2301 ccacctgttt cttctttcct aggggtagct taccggttaa aggatccatg
2351 gaaacatcta gatccttctt cttaccttcc ttcttattct ttgcatcttt
2401 ttcctgttgt gggtccacta ggtcttgatt tattgaatca agaggtatca
2451 tagcgggtga cattctcttg gaactcacct tacttgaacc tagcttttgg
2501 agtaaagcca tttttttaca gaatgtgaaa aaagatttcc tttatcaata
2551 tgtaagtttt tcgcttttca aagatgccca gactttgtgt