Sequence of DPV Squash leaf curl China virus
Squash leaf curl China virus DNA-A, complete sequence.
ACC No: AB027465
Dated: 2003-03-10 | Length: 2741 | CRC: 689089752
!!NA_SEQUENCE 1.0
ID AB027465 standard; circular DNA; VRL; 2741 BP.
XX
AC AB027465;
XX
SV AB027465.1
XX
DT 02-JUN-1999 (Rel. 59, Created)
DT 10-MAR-2003 (Rel. 75, Last updated, Version 3)
XX
DE Squash leaf curl China virus DNA-A, complete sequence.
XX
KW .
XX
OS Squash leaf curl China virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2741
RA Qinyan Y., Yule L., Po T.;
RT ;
RL Submitted (18-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL Yin Qinyan, Microbiological Institution,Chinese Academy, Molecular
RL Virological and Engineering; Zhong guan cun, Beijing 100080, China
RL (E-mail:ddbj@sun.im.ac.cn, Tel:861062554398)
XX
RN [2]
RA Qinyan Y., Yule L., Po T., Yuman Z.;
RT "The clon and sequencing of SqLCV DNA A isolating from China";
RL Unpublished.
XX
DR GOA; Q86895; Q86895.
DR SPTREMBL; Q86895; Q86895.
DR SPTREMBL; Q9WB28; Q9WB28.
DR SPTREMBL; Q9WB29; Q9WB29.
DR SPTREMBL; Q9WB30; Q9WB30.
DR SPTREMBL; Q9WB31; Q9WB31.
DR SPTREMBL; Q9WB32; Q9WB32.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2741
FT /db_xref="taxon:223323"
FT /sequenced_mol="DNA"
FT /organism="Squash leaf curl China virus"
FT /clone="pGEM-T"
FT /segment="component A"
FT CDS 6. .458
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WB28"
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="BAA78098.1"
FT /translation="MAARFFYVGPLPMKFTLHGLFITWGPLNRLPHQVLIHNMWDPLMH
FT EFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDLILVLRAKNYVEATSRYYHFNS
FT RVEGTPTSQLRQPICFPCSCPHCPRHKGKGLDKQADEQKTQDVQDV"
FT CDS 280. .1050
FT /codon_start=1
FT /db_xref="GOA:Q86895"
FT /db_xref="SPTREMBL:Q86895"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="BAA78099.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT
FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGSGLTHR
FT VGKRFCVKSVYVLGKIWMDGNIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGAYASREQALVRKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(310. .828)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WB29"
FT /gene="AC4"
FT /product="Rep protein 4"
FT /protein_id="BAA78100.1"
FT /translation="MPFAQNLVSITMHILHRCSAWFIVEHIKNLPKVLWSSCRTTVSNQ
FT KKYYTISVIFSFDISVHPYLSQHINRFHTKSLSNAMCESGASCNITDTHHLTNMRDIVP
FT RFERLNFTRAFTSPWHIGTSIHPVHLGFSVHRPVCPGLSLCDAGNGDNCTGNIWAVEVE
FT TSAYLRRGS"
FT CDS complement(1047. .1457)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WB30"
FT /gene="AC3"
FT /product="Rep protein 3"
FT /protein_id="BAA78101.1"
FT /translation="MITDSRTGEYITVDRAESGVYIWTVPNPLYFKILKHDIRPCLEEH
FT DIIKVQVMFNHNLRKALGLHKCAITFQIWTGLRPPTGIFLRVFKTQVLKYLDMLGVIGI
FT YNVTRAVYHVLDNVLEKTIDVWTTYDVKLNIY"
FT CDS complement(1192. .1596)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WB31"
FT /gene="AC2"
FT /product="Rep protein 2"
FT /protein_id="BAA78102.1"
FT /translation="MQSSSQSKNHCIPVAKASQPQKKKKNIRRRRIDLPCGCSYYMSIN
FT CHDHGFTHRGVHHCGSSREWRVYLDGSKSPIFQNIKTRHQTMSRGTRHNQGAGNVQPQP
FT AESTGTSQMCDNFPDMDGLTPADWDFLESL"
FT CDS complement(1499. .2230)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WB32"
FT /gene="AC1"
FT /product="Rep protein 1"
FT /protein_id="BAA78103.1"
FT /translation="MVDLLVEVNKQQTTAYARAINTGTKEDALKVLKELAPKDYVLQFH
FT NMNSNLDRIFPPRAEVYVSPFSVSSFDRVPQQLVDWVSVNVGCSAARPNRPIGIVLEGD
FT SRTGKTAWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVMIKGGIPTIFLRNKGPNSSYKECLDEEKNAALKQWALKNAIFITIEEPL
FT YSGRESIATAEEEEEHQTQTN"
XX
SQ Sequence 2741 BP; 730 A; 591 C; 600 G; 820 T; 0 other;
AB027465 Length: 2741 March 18, 2003 10:52 Type: N Check: 7420 ..
1 accgaatggc cgcgcgattt ttttatgtgg gccctctacc aatgaaattc
51 acgctacatg gcttatttat tacgtgggga ccattaaata gacttccgca
101 ccaagttttg atccacaaca tgtgggatcc acttatgcac gaatttcctg
151 aaagcgttca tggtctaagg tgcatgctag cggtgaaata tcttcaggag
201 gtggaaaaaa catattctcc ggacacagtc ggctacgatc ttgtccgcga
251 tctcattctt gttctccgcg caaagaacta tgtcgaagcg accagccgat
301 attatcattt caactcccgc gtcgaaggta cgccgacgtc tcaacttcga
351 cagcccatat gtttcccgtg cagttgtccc cattgcccgc gtcacaaagg
401 gaaaggcctg gacaaacagg ccgatgaaca gaaaacccaa gatgtacagg
451 atgtatagaa gtcccgatgt gccaagggga tgtgaaggcc cttgtaaagt
501 tcagtcgttc gaatctaggc acgatgtctc tcatattggt aaggtgatgt
551 gtatcagtga tgttacacga ggctccggac tcacacatcg cgttggaaag
601 cgattttgtg tgaaatctgt ttatgtgttg ggaaagatat ggatggacgg
651 aaatatcaaa actaaaaatc acactaatag tgtaatattt tttctggttc
701 gagaccgtcg tcctacagga actccacagg actttgggga ggtttttaat
751 atgttcgaca atgaaccaag cactgcaacg gtgaagaata tgcatcgtga
801 tcgataccaa gttctgcgca aatggcatgc cactgtgacg ggaggagcat
851 acgcatcaag ggagcaagca ttagttagga agtttgttag ggtcaataat
901 tatgttgttt acaatcaaca agaggccggc aagtatgaga atcatactga
951 aaatgcatta atgttgtata tggcctgtac tcacgcatcg aaccctgttt
1001 acgcgacttt gaaaatccgg atctattttt atgattctgt aacaaattaa
1051 tatatattca atttcacatc atatgttgtc catacatcaa ttgtcttttc
1101 caatacattg tccaatacat ggtaaactgc tcttgttaca ttataaatac
1151 caatcactcc taacatatcc aggtacttaa ggacctgtgt cttaaagact
1201 ctcaagaaaa tcccagtcgg cgggcgtaag cccgtccata tctggaaagt
1251 tatcgcacat ttgtgaagtc ccagtgcttt ccgcaggttg tggttgaaca
1301 ttacctgcac cttgattatg tcgtgttcct ctagacatgg tctgatgtcg
1351 tgttttaata ttttgaaata taggggattt ggaaccgtcc agatatacac
1401 gccactctct gctcgatcca cagtgatgta ctcccctgtg cgtgaatccg
1451 tgatcatggc aatttattga catgtaatac gagcatccgc acggtagatc
1501 aattcgtctg cgtctgatgt tcttcttctt cttctgcggt tgcgatgctt
1551 tcgcgaccgg aatacagtgg ttcttcgatt gtgatgaaga ttgcattctt
1601 taatgcccac tgctttagtg ctgcattctt ttcttcatcg agacattctt
1651 tgtaactgct gtttgggcct ttattgcgga ggaagatggt gggaattcca
1701 cctttaatca tgactggctt tccgtacttc gtgttgcttt gccagtctct
1751 ctgggccccc atgaattctt taaaatgctt tagatagtgt ggatcaacgt
1801 catcaatgac gttgtaccaa gcatcattat tgtacactct agggcttaga
1851 tccagatggc cgcacaagta attgtgtggt cctaaagaac gcgcccacgc
1901 agttttgccc gttctactat caccctctaa aactattcct atgggtctat
1951 tcggccgcgc agcggaacac cccacgttaa ctgaaaccca atcgacgagt
2001 tgttgcggaa ctctgtcgaa tgatgaaact gaaaaaggag aaacatacac
2051 ctcagcacga ggtggaaaaa tacgatctaa atttgaattc atgttatgaa
2101 attgcaaaac gtaatctttg ggtgctaatt ctttcaacac tttcaatgca
2151 tcttccttgg ttcctgtatt tattgccctt gcgtacgccg tcgtttgctg
2201 tttgttgacc tccacgagca gatcgaccat cgatctggaa gacaccccat
2251 tctaacacgt tcccgtcttt gtcgatgtat tgtttgacgt ccgatgccga
2301 tttagctccc tgaatgttcg gatggaaatg tgctgacccg acttggggaa
2351 accaagtcga agaatctgat attcttgcac tggaactttc cttcgaactg
2401 aaataagaac gtggatatgc ggagacccat cttcgtgcaa ctctctgcaa
2451 attttgataa acttcttcga agttggagtt tctagggttt gcaattggga
2501 aagtgcctct tctttggtta gagagcactt tggatatgtg aggaaatagt
2551 tttttgcatt aattttgaaa gacttagggg gagccatcaa aacgctcgtt
2601 ttggatcggt gtcccttcaa aaatatggta tatcggtgta tggagtctca
2651 tatatagttt ggacaccaaa tggcaaaacg gtaattatgt aaatatctac
2701 tttaattcaa aaatgagtaa agcggccatt cgtataatat t