Sequence of DPV Cocksfoot mottle virus

Cocksfoot mottle virus CP gene for coat protein, complete cds.

ACC No: AB047688

Dated: 2003-07-07 | Length: 1084 | CRC: -525733072

                !!NA_SEQUENCE 1.0
ID   AB047688   standard; RNA; VRL; 1084 BP.
XX
AC   AB047688;
XX
SV   AB047688.1
XX
DT   26-AUG-2001 (Rel. 68, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Cocksfoot mottle virus CP gene for coat protein, complete cds.
XX
KW   .
XX
OS   Cocksfoot mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-1084
RA   Kobayashi Y.O.;
RT   ;
RL   Submitted (24-AUG-2000) to the EMBL/GenBank/DDBJ databases.
RL   Yuki Ohdaira Kobayashi, National Agriculture Research Center, Virology
RL   Laboratory; Kan-nondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan
RL   (E-mail:oodaira@narc.affrc.go.jp, Tel:81-298-38-8932, Fax:81-298-38-8929)
XX
RN   [2]
RA   Kobayashi Y.O.;
RT   "Cocksfoot mottle virus gene for coat proteins, isolate M.";
RL   Unpublished.
XX
DR   GOA; Q91QP0.
DR   SPTREMBL; Q91QP0; Q91QP0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1084
FT                   /db_xref="taxon:40979"
FT                   /mol_type="genomic RNA"
FT                   /organism="Cocksfoot mottle virus"
FT   CDS             93. .857
FT                   /codon_start=1
FT                   /db_xref="GOA:Q91QP0"
FT                   /db_xref="SPTREMBL:Q91QP0"
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="BAB63462.1"
FT                   /translation="MMVRKGAATKAPQQPKPKAQQQPGGRRRRRGRSMEPVSRPLNPPA
FT                   AVGSTLKAGRGRSAGVSDWFDTGMITSYLGGFQRTAGTTDSQVFIVSPAALDRVGTIAK
FT                   AYALWRPKHWEIVYLPRCSTQTDGSIEMGFLLDYADSVPTNTRTMASSTSFTTSNVWGG
FT                   GDGSSLLHTSMKSMGNAVTSALPCDEFSNKWFKLSWSTPEESENAHLTDTYVPARFVVR
FT                   SDFPVVTADQPGHLWLRSRILLKGSVSPSTNL"
XX
SQ   Sequence 1084 BP; 241 A; 285 C; 303 G; 255 T; 0 other;

 AB047688  Length: 1084  July 15, 2003 09:02  Type: N  Check: 4878  ..

       1  tgatgtggaa agcttggaga tggagctaag ctcttctcgc cgctggggcc
      51  agatagtcag atacctccgc cggattggcc gggtctccgg aaatgatggt
     101  gaggaaagga gcagcaacga aagccccgca acaaccaaaa cccaaggctc
     151  agcagcagcc tgggggccgc cgcaggaggc gtggccggtc gatggagcca
     201  gtctctcgac ctttgaaccc tccagcagcg gttggttcca ccttgaaggc
     251  tggtagaggc aggtctgctg gtgtgagtga ctggtttgac accggtatga
     301  tcaccagcta cctaggtggt tttcagcgca cagctggaac tactgactcc
     351  caggtattca tcgtgtcacc cgctgcgttg gaccgtgttg gaaccatagc
     401  gaaggcgtat gcgttgtgga gacctaagca ttgggaaatc gtgtatctcc
     451  ccagatgttc tactcagaca gatgggtcga tcgagatggg atttctctta
     501  gattatgcag atagcgtccc aaccaacacc cgaactatgg cctcctctac
     551  ctccttcaca acttcaaacg tgtggggagg tggagatggc agcagtttgc
     601  tgcacacgtc catgaagtcc atgggcaacg ctgttacgag cgctctccct
     651  tgtgatgagt tctcgaacaa atggtttaag ttatcttgga gcactcctga
     701  ggaatcggag aacgctcatt tgactgacac ctacgttccg gcgcgcttcg
     751  tggtaaggtc tgacttccca gtagtcacgg ctgaccaacc tggtcatctc
     801  tggctccggt ccaggatctt gctcaaggga tcagtttccc cttctacaaa
     851  tttgtagtca agtactgcag ggatgacaaa cctgtaaagc agtgtccgcg
     901  cttggtggag tcgcgttcgt ccacttggaa atctaactcc aaagctttgc
     951  ttgaagattg acggattggt atcatctccg taaggatacc gaccactggc
    1001  tgggctcgtc acccctcctt tgtgtctcac aaacgacgaa tctgcgctcg
    1051  gcaaatgaca ggatcatggc cggggcaggt gctt