Sequence of DPV Cucumber mosaic virus
Cucumber mosaic virus genes for 3a protein and coat protein, complete cds.
ACC No: AB063333
Dated: 2003-07-07 | Length: 2218 | CRC: 2013819657
!!NA_SEQUENCE 1.0
ID AB063333 standard; RNA; VRL; 2218 BP.
XX
AC AB063333;
XX
SV AB063333.1
XX
DT 22-JUN-2001 (Rel. 68, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE Cucumber mosaic virus genes for 3a protein and coat protein, complete cds.
XX
KW .
XX
OS Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
XX
RN [1]
RP 1-2218
RA Takanami Y., Furuya N., Takeshita M., Okuno K., Kameya-Iwaki M.;
RT ;
RL Submitted (19-JUN-2001) to the EMBL/GenBank/DDBJ databases.
RL Yoichi Takanami, Kyushu university, Grduated school of Bioresource and
RL Bioenvironmental Sciences; Hakozaki 6-10-1, Higashi, Fukuoka 812-8581,
RL Japan (E-mail:takanami@agr.kyushu-u.ac.jp, Tel:81-92-642-2834,
RL Fax:81-92-642-2834)
XX
RN [2]
RA Okuno K., Kameya-Iwaki M., Takeshita M., Furuya N., Takanami Y.;
RT "A Cucumber mosaic virus isolated from Silene armeria";
RL Unpublished.
XX
DR GOA; Q91PP6.
DR GOA; Q91PP7.
DR SPTREMBL; Q91PP6; Q91PP6.
DR SPTREMBL; Q91PP7; Q91PP7.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2218
FT /country="Japan:Yamaguchi-city"
FT /db_xref="taxon:12305"
FT /mol_type="genomic RNA"
FT /organism="Cucumber mosaic virus"
FT /clone="pCSi3"
FT /isolate="Silene armeria"
FT /strain="Si"
FT /segment="3"
FT CDS 121. .960
FT /codon_start=1
FT /db_xref="GOA:Q91PP7"
FT /db_xref="SPTREMBL:Q91PP7"
FT /transl_table=1
FT /product="3a protein"
FT /protein_id="BAB61037.1"
FT /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFHPTYDCPMETVGNRKRCFAVVIE
FT RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSGLARLLK
FT SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT CDS 1261. .1917
FT /codon_start=1
FT /db_xref="GOA:Q91PP6"
FT /db_xref="SPTREMBL:Q91PP6"
FT /transl_table=1
FT /product="coat protein"
FT /protein_id="BAB61038.1"
FT /translation="MDKSESTSAGRNRRRRPRRGSRSASTSSDANFRVLSQQLSRLNKT
FT LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVMEYDKKLV
FT SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ Sequence 2218 BP; 521 A; 523 C; 528 G; 646 T; 0 other;
AB063333 Length: 2218 July 15, 2003 09:22 Type: N Check: 2829 ..
1 gtaatctaac cacctgtgtg tgtgtgtgtg tgtatcgagt cgtgttgtcc
51 gcacatttga gtcgtgttgt ccgcacatat atatttattt cgttgtacag
101 tgtgttagat ttcccgaggc atggctttcc aaggtaccag taggacttta
151 actcaacagt cctcagcggc tacgtctgac gatcttcaaa agatattatt
201 tagccctgaa gccattaaga aaatggctac tgagtgtgac ctaggccggc
251 atcactggat gcgcgctgat aatgctattt cagtccggcc cctcgttccc
301 gaagtaaccc acggtcgtat tgcttccttc tttaaatctg gatatgatgt
351 tggtgaattg tgctcaaaag gatatatgag cgtccctcaa gtgttatgtg
401 ctgttactcg gacagtttct actgatgctg aagggtcctt gagaatttac
451 ttagctgatc taggtgacaa ggagttatct cctatagatg ggcaatgcgt
501 ctcgttacac aaccatgatc ttcccgcttt ggtgtctttc caccccacgt
551 acgactgtcc tatggaaaca gttgggaatc gtaagcggtg ttttgctgtc
601 gttatcgaaa gacatggtta cattgggtat accggtacca cggctagcgt
651 gtgtagtaat tggcaagcaa ggttttcttc taagaataac aactacactc
701 atatcgcagc tgggaagact ctagtgctgc ctttcaacag attagctgag
751 caaacaaaac cgtcaggtct cgctcgcctg ttgaagtcgc aattgaacaa
801 cattgaatct tcgcaatatc tgttaacgaa cgcgaagatt aatcaaaatg
851 cgcgcagtga gtccgaggaa ttaaatgttg agagccctcc cgccgcaatc
901 gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa
951 cggtctttag cactttggtg cgtattagta tataagtatt tgtgagtctg
1001 tacataatac tatatctata gtgtcctgtg tgagttgaaa cagtagacat
1051 ctgtgacgcg atgccgtgtt gagaagggaa cacatctggt tttagtaagc
1101 ctacatcaca gttttgaggt tcaatacctc ttactccctg ttgagccccc
1151 ttgctttctc atggatgctt ctccgcgaga ttgcgttatt gtctactgac
1201 tatatagaga gtgtgtgtgt gctgtgtttt ctcttttgtg tcgtagaatt
1251 gagtcgagtc atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc
1301 gacgtcgtcc gcgtcgtggt tcccgctccg cctccacctc ctcggatgct
1351 aactttagag tcttgtcgca gcagctttcg cgacttaaca agacgttagc
1401 agctggtcgt ccaaccatta accacccaac ctttgtaggg agtgaacgct
1451 gtaaacctgg atacacgttc acatctatca ccctaaagcc accaaaaata
1501 gaccgcgggt cttattacgg taaaaggttg ttattacctg attcagtcat
1551 ggaatatgat aagaaacttg tttcgcgcat tcaaattcga gttaatcctt
1601 tgccgaaatt tgattctacc gtgtgggtga cagtccgtaa agttcctgcc
1651 tcctcggact tatccgttgc cgccatctct gccatgtttg cggacggagc
1701 ctcaccggta ctggtttatc agtatgctgc atctggagtc caagctaaca
1751 acaaattgtt gtatgatctt tcggcgatgc gcgctgatat aggcgacatg
1801 agaaagtacg ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga
1851 cgagctagta cttcatgttg acgtcgagca ccaacgcatt cccacgtctg
1901 gggtgctccc agtttgattc cgttttttca agaaccctcc ctccgatttc
1951 tgtggcggga gctgagttgg cagttttgct ataaactgtc tgaagtcact
2001 aaacgttttt acggtgaacg ggttgtccat ccagcttacg gctaaaatgg
2051 tcagtcgtgg agaaatccac gccagcagat ttacaaatct ctgaggcgcc
2101 tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtacct
2151 ctagcacaac gtgctagttt cagggtacag gtggcgtcca ctttcgtggg
2201 ggcctccaaa ggagacca