Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:ON16J.

ACC No: AB076423

Dated: 2003-07-07 | Length: 1086 | CRC: 2102070284

                !!NA_SEQUENCE 1.0
ID   AB076423   standard; RNA; VRL; 1086 BP.
XX
AC   AB076423;
XX
SV   AB076423.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:ON16J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JX40.
DR   SPTREMBL; Q8JX40; Q8JX40.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ON16J"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JX40"
FT                   /db_xref="SPTREMBL:Q8JX40"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02759.1"
FT                   /translation="MAAVTFAPAITNAITNKPAPTGMVQFGSFPPMPLRSTTVTTIATL
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSDAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAIKHKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRICRMND
FT                   QGVDMLIRSLVKIFKTKSANIEYIGKKSVKVDFIRKGQTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGHSGNKTTINPGVICAGWSGIVIRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 349 A; 240 C; 287 G; 210 T; 0 other;

  AB076423  Length: 1086  July 15, 2003 09:14  Type: N  Check: 81  ..

       1  atggcagcag ttacattcgc accagccatc accaacgcca tcaccaataa
      51  accagcaccc accggaatgg tacagtttgg gagtttccca ccaatgccat
     101  tgcgatccac caccgtcacc acaatcgcca ctttagtggc gcaacctaaa
     151  ctgtacacag tgcagtttgg aagccttgac ccagtagtcg tcaagagtgg
     201  agcagggtcc tttgctaagg caacacgcca gcagcctaac gttgaaatag
     251  acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg
     301  gatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt
     351  tctggactgg gaggctagtc tgaagagaag ctcgtatgga attgctgaga
     401  acgagaaagt tgtaatgaca actcgtggcg tcagcaagat agtgcccaga
     451  agttcaaggg caataaagca caagcgcgca agggagaggc gtagagcgca
     501  gcaaccaatt atactaaagt gggagcctaa attgagcggg atctcaatcg
     551  gaggaggtct ctctgcgagc gcaatcgaag cagaagaggt tcgcacaaag
     601  tggccgcttc acaaaacacc gtcaatgaag aagaggacgg tgcatagaat
     651  atgcaggatg aacgaccaag gagttgacat gttgatacgg tctctggtta
     701  agattttcaa gactaagagt gccaacattg agtacatcgg aaagaagtcg
     751  gttaaggtcg atttcatcag aaaaggacag acgaaattcg caagaattca
     801  agtagcacac ttactcggga agagagcaca gcgcgacttg tcaactggaa
     851  tggaagaaaa ccatttcatt gacattctca gcgggcactc aggtaacaaa
     901  acaaccataa atccaggagt aatctgtgca ggttggagtg gcatagtcat
     951  tagaaatgga attctaaccc aaaaacgaag cagaagtcca tcagaggcct
    1001  ttgtaattag aggtgagcac gaaggcaagt tgtacgatgc caggatcaaa
    1051  gtcacgagga caatgagcca caagattgtg cacttt