Sequence of DPV Turnip mosaic virus

Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:ITA1.

ACC No: AB076523

Dated: 2003-07-07 | Length: 864 | CRC: 846496315

                !!NA_SEQUENCE 1.0
ID   AB076523   standard; RNA; VRL; 864 BP.
XX
AC   AB076523;
XX
SV   AB076523.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:ITA1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JWU0.
DR   SPTREMBL; Q8JWU0; Q8JWU0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA1"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JWU0"
FT                   /db_xref="SPTREMBL:Q8JWU0"
FT                   /note="coat protein"
FT                   /gene="CP"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02859.1"
FT                   /translation="ANETLDAGLTEEQKQAEKERKEREKAEKEREKQKQLALKKGKGSA
FT                   QEDGERDKEVNAGTSGTFSAPRLKSLASKMRVPKYEKKLALNLDHLILYTPEQTDLSNT
FT                   RSTQKQFNTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 864 BP; 297 A; 182 C; 223 G; 162 T; 0 other;

  AB076523  Length: 864  July 15, 2003 09:08  Type: N  Check: 3360  ..

       1  gcaaatgaaa cgctagatgc tggtctgaca gaagagcaaa aacaagcaga
      51  gaaagaaaga aaggagagag agaaagcaga aaaggaacga gagaagcaga
     101  agcaattagc actcaagaag ggcaaaggct cagcacaaga ggacggagaa
     151  cgcgacaagg aagtgaatgc gggaacttct ggaactttca gcgcacctag
     201  gctcaagagc ctagcaagca aaatgcgagt gccaaaatac gagaaaaagt
     251  tagcccttaa ccttgatcac ttgattttat acacgccaga gcagacggac
     301  ttatcgaaca cacgctcaac acagaagcag ttcaacacat ggtttgaggg
     351  cgtaatggct gactatgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttgat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgttacgca tttgatttct atgaaatgac ttctaggact ccaatacgtg
     701  cgagagaagc gcacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggaaagacac acgaccgagg atgttaatcg gaacatgcac aacttacttg
     851  gcgttaaggg gttg