Sequence of DPV Ornithogalum virus 2

Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C15.

ACC No: AB079654

Dated: 2003-07-07 | Length: 1609 | CRC: 1203304118

                !!NA_SEQUENCE 1.0
ID   AB079654   standard; RNA; VRL; 1609 BP.
XX
AC   AB079654;
XX
SV   AB079654.1
XX
DT   11-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C15.
XX
KW   .
XX
OS   Ornithogalum virus 2
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1609
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   ;
RL   Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0195,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   "Nucleotide sequence of the coat protein gene of potyviruses infecting
RT   Ornithogalum thyrsoides";
RL   Arch. Virol. 148:613-621(2003).
XX
DR   GOA; Q8JW33.
DR   SPTREMBL; Q8JW33; Q8JW33.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1609
FT                   /db_xref="taxon:186642"
FT                   /mol_type="genomic RNA"
FT                   /organism="Ornithogalum virus 2"
FT                   /clone="C15"
FT   CDS             <1. .1425
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JW33"
FT                   /db_xref="SPTREMBL:Q8JW33"
FT                   /note="3'-terminal region"
FT                   /note="nuclear inclusion b - coat protein region"
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAC07305.1"
FT                   /translation="TTGSGNNSGQPSTVVDNTLMVLLAMFYALHKSGISYQTYKQYCQF
FT                   FINGDDLLIAVNGTLGESALDTFERSFSELGPNYKFDNRTREKTELWFMSHRGLVIDEM
FT                   YIPKLEPERVVSILEWDRSVEPEHRLEAICAAMIESWGYPELTHQIRLFYRWVLTQAPY
FT                   AALASVGKAPYISELALRNLYTGTQVKDSELEVYIEAMKEESLQEEDYNVYHQTSASSD
FT                   LDAGRDTPMITTKKKDKDLDTGTSGTFSVPRLRQLPSKMSLPKVRGKTIVNLPHLITYT
FT                   PDQIHLSNTRSTMKQFEFWYEGVKKEYEVDDTQMEIIMNGLMVWCIENGTSPNLNGMWV
FT                   MMEGDEQIEFPLKPVIEFAQPTFRQIMAHFSNVAEAYIEKRNSEQKYMPRYGLQRNLTD
FT                   YSLARYAFDFYEMTSKTPVRAREAHMQMKAAAIRGTTNRLFGLDGNVSQKEEDTERHTT
FT                   EDVNRKMHSLLGVSTM"
XX
SQ   Sequence 1609 BP; 481 A; 334 C; 386 G; 408 T; 0 other;

 AB079654  Length: 1609  July 15, 2003 09:03  Type: N  Check: 4434  ..

       1  accacaggat ccgggaacaa tagtgggcaa ccctcaactg tcgtagacaa
      51  caccttgatg gtgttacttg caatgtttta cgcgctgcac aagagcggaa
     101  tttcttacca aacgtacaag caatactgcc aatttttcat aaatggggac
     151  gaccttctca ttgctgtaaa tggcacactt ggtgagagtg ctcttgatac
     201  gttcgagcga tcttttagtg agttgggtcc caattacaaa ttcgacaaca
     251  gaacacgtga gaagactgaa ctctggttca tgtctcacag aggcttggta
     301  attgatgaaa tgtatatacc aaaactggaa ccagagagag ttgtgtccat
     351  ccttgaatgg gacaggagcg ttgaacctga acatcgactc gaagcaattt
     401  gcgctgcaat gatagaatca tggggatatc ctgaactaac gcaccagata
     451  cgactatttt acaggtgggt tttaacacag gcaccatacg cagccctcgc
     501  atctgttgga aaagcaccat acatctccga gttagctctc aggaacttgt
     551  acacaggcac acaagtcaaa gactcggagt tggaagtgta catagaagcg
     601  atgaaagagg aatcactaca ggaggaggac tacaacgtat atcatcaaac
     651  ctcggcctcg agcgatttgg atgctggacg tgatacacca atgatcacaa
     701  ccaagaagaa ggataaagat cttgatacag gcacaagtgg aacgttctcg
     751  gtgccacgat tacgccaact gccaagcaag atgtcactcc cgaaagtccg
     801  aggcaagacc attgtgaatt tacctcattt aatcacttac actcctgatc
     851  agattcatct ctcgaatacg cgctcaacaa tgaaacagtt tgaattctgg
     901  tatgagggag tgaaaaagga gtacgaggtt gacgataccc agatggagat
     951  aataatgaat ggattgatgg tgtggtgtat cgaaaatggt acatcaccaa
    1001  acctcaatgg catgtgggtc atgatggagg gcgatgaaca aatagaattt
    1051  cctctcaagc cagttatcga atttgcccaa ccgacattcc ggcagataat
    1101  ggcacatttc agtaacgttg ctgaagcgta tattgaaaag aggaattctg
    1151  agcagaaata catgcctagg tacgggcttc agcgaaattt aactgactac
    1201  agtctcgcgc gttatgcgtt cgatttttac gagatgactt ccaagacgcc
    1251  tgtgcgcgct cgagaggcac acatgcaaat gaaagcagcc gctattagag
    1301  gtaccactaa tcggttgttt ggcttggatg ggaacgttag tcagaaggaa
    1351  gaggacacgg agcgtcacac tactgaagat gtcaacagga aaatgcactc
    1401  actgctgggt gtgtcaacaa tgtagtgtga tggtaggtgc gaacttaccc
    1451  gtcagcatcc tttttttatt gcaataatat aagtgtgtag ctatgcgcta
    1501  gtgtggtttt accaccgttc actatattat atgttttaac acttgtattt
    1551  cttggttgtg tggtgagatt ttatctcgta tcaaccgtgt cttacaggtg
    1601  tgagaagct