Sequence of DPV Honeysuckle yellow vein mosaic virus

Honeysuckle yellow vein mosaic virus V1, C3, C2 genes for coat protein, replication enhancer protein, transcriptional transactivator protein, complete cds, isolate: OT2.

ACC No: AB108829

Dated: 2008-06-21 | Length: 1570 | CRC: -1976149810

                
ID   AB108829; SV 1; linear; genomic DNA; STD; VRL; 1570 BP.
XX
AC   AB108829;
XX
DT   22-APR-2003 (Rel. 75, Created)
DT   21-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE   Honeysuckle yellow vein mosaic virus V1, C3, C2 genes for coat protein,
DE   replication enhancer protein, transcriptional transactivator protein,
DE   complete cds, isolate: OT2.
XX
KW   .
XX
OS   Honeysuckle yellow vein mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1570
RA   Takanami Y., Komuta K.;
RT   ;
RL   Submitted (18-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoichi Takanami Kyushu University, Graduated school of Bioresource
RL   and Bioenvironmental Sciences; 6-10-1, Hakozaki, Higashi-ku, Fukuoka,
RL   Fukuoka 812-8581, Japan
XX
RN   [2]
RA   Takanami Y., Komuta K.;
RT   "Diversity of Honeysuckle-infecting geminivirus (HsGV) in Japan";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1570
FT                   /organism="Honeysuckle yellow vein mosaic virus"
FT                   /isolate="OT2"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Oita"
FT                   /note="synonym: Honeysuckle-infecting geminivirus"
FT                   /db_xref="taxon:180587"
FT   CDS             97. .870
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q80GL6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q80GL6"
FT                   /protein_id="BAC75788.1"
FT                   /translation="MSKRPADIGIFTPAFRARRRLNFDGPYVSRVNVPIAQGTSKKRSW
FT                   AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH
FT                   RVGKRFCIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE
FT                   PSTATIKQDLRDRLQVLHKFTGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN
FT                   HTENALLLYMGCAHASDPVCATLKIRVYFYDSVQN"
FT   CDS             complement(867. .1271)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q80GL5"
FT                   /protein_id="BAC75789.1"
FT                   /translation="MDSRTGDIITAAQAQSGAYIWTVPNPLYFKITSHARRPFNMDRDI
FT                   ITAQIQFNHNLRSQLGLHKCFLTFKIWTLSHHQTSHLSILFRTQVLKYLDDLGVISVNN
FT                   VIRAVDHVLYDVLDGTEYVQQFTELKFKLY"
FT   CDS             complement(1012. .1419)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C2"
FT                   /product="transcriptional transactivator protein"
FT                   /db_xref="GOA:Q80GL4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q80GL4"
FT                   /protein_id="BAC75790.1"
FT                   /translation="MQPSSPSTAHSTPVPIKVRHRSEKKRAPRRRRIDLNCGCPIYVRL
FT                   GCANHGFTHRGHHHCSSGSEWRVYLDSAKSPLFQNHEPRTTTVQHGSGHNNSTDPIQPQ
FT                   SQISTGSTQVLPDFQDLDSLTSSDLASLNFI"
XX
SQ   Sequence 1570 BP; 419 A; 326 C; 365 G; 460 T; 0 other;

ab108829 Length: 1570  21-JUN-2008  Type: N  Check: 4782  ..

       1  ttaaatacct tctactcgtt gaagctacct actctccgga tacaataggt
      51  tacgatctga tccgtgacct tatcagtgtt attcgtgcga agaactatgt
     101  cgaagcgtcc cgccgatata gggattttca ctcccgcatt cagagctcgt
     151  cgccgtctga acttcgacgg cccgtatgtc agccgtgtga atgtccccat
     201  tgcccaaggc acaagcaaaa agagatcatg ggctcaaagg cccatgtatc
     251  ggaagcccag gatatacagg atgtacagaa gccctgatgt acctaagggt
     301  tgtgaaggcc cctgtaaggt ccagtctttc gagaagaaag atgatgttgg
     351  tcactctggt aaaatgttat gtatctccga tattactcgt ggtaatgggc
     401  ttacacatcg tgttggtaag aggttttgta taaaatcagt ctatatcatt
     451  ggaaagatat ggatggatga gaacattaag ctcaagaatc acactaataa
     501  cgtgatcttc tggcttgtta gagatagacg ccctgtttcc gttccttatg
     551  gtttccaaga ggcgtttaat atgtacgaaa atgaacctag tacagctact
     601  atcaaacagg atttgagaga ccgcttgcag gttttacaca agttcactgg
     651  tacggttaca ggtggacaat atgcgtctaa ggaacaagct atgatcaagc
     701  gtttctggag gttgaatcac catgtcacat acaatcacca agaggctgct
     751  aaatatgaga atcacactga aaatgctttg ttattgtata tgggctgtgc
     801  tcatgccagt gatccagtgt gtgctacatt aaaaattaga gtgtatttct
     851  acgattcagt acagaattaa taaagcttga attttagctc agtaaattgt
     901  tgtacatact ctgttccatc taatacatcg tacaatacat gatcaaccgc
     951  cctaattaca ttattaactg agattacacc caaatcatct aaatacttca
    1001  acacttgtgt cctaaataaa attgagagat gcgaggtctg atgatgtgag
    1051  agagtccaaa tcttgaaagt caggaagcac ttgtgtagac ccagttgaga
    1101  tctgagattg tggttgaatt ggatctgtgc tgttattatg tcccgatcca
    1151  tgttgaacgg tcgtcgtgcg tggctcgtga ttttgaaata aaggggattt
    1201  ggcactgtcc agatatacgc gccactctga gcctgagctg cagtgatgat
    1251  gtcccctgtg cgtgaatcca tgatttgcac accctaatct gacgtatata
    1301  gggcacccgc agttcagatc aatcctccgc ctgcgaggtg ctctcttctt
    1351  ctctgatctg tgtcgcacct tgatgggtac cggagtagag tgggccgtag
    1401  agggtgatga aggttgcatt tttaattgcc caggccttta gcgcagcatt
    1451  cttctcctcg tctaaatact ctgtgtatga tgacgttggg cctggattgc
    1501  agaggaagat tgttgggata ccacctttaa tttgaattgg tttcccgtac
    1551  ttggtgttgc cttgccagtc