Sequence of DPV Soybean mosaic virus

Soybean mosaic virus CP gene for coat protein, partial cds, isolate: No.8010.

ACC No: AB206827

Dated: 2008-06-21 | Length: 798 | CRC: 1655711489

                
ID   AB206827; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   AB206827;
XX
DT   04-APR-2006 (Rel. 87, Created)
DT   21-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE   Soybean mosaic virus CP gene for coat protein, partial cds, isolate:
DE   No.8010.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-798
RA   Sasaya T., Saruta M.;
RT   ;
RL   Submitted (11-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Takahide Sasaya National Agricultural Research Center for Western
RL   Region, Laboratory of Plant Virology; 1-3-1 Senyu-cho, Zentsuji, Kagawa
RL   765-8508, Japan
XX
RN   [2]
RA   Saruta M., Kikuchi A., Okabe A., Sasaya T.;
RT   "Molecular characterization of A2 and D strains of Soybean mosaic virus,
RT   which caused a recent virus outbreak in soybean cultivar Sachiyutaka in
RT   Chugoku and Shikoku regions of Japan";
RL   J. Gen. Plant Pathol. 71:431-435(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Soybean mosaic virus"
FT                   /strain="A2"
FT                   /isolate="No.8010"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Kumamoto"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .798
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q1XI34"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q1XI34"
FT                   /protein_id="BAE92865.1"
FT                   /translation="SGKEKEGEMDAGKDPKKNTSSSKGAGTSNKDVNVGSKGKVVPRLQ
FT                   KITRKMNLPMVEGKIILSLDHLLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 798 BP; 269 A; 141 C; 202 G; 186 T; 0 other;

ab206827 Length: 798  21-JUN-2008  Type: N  Check: 8709  ..

       1  tcaggcaagg aaaaagaagg ggaaatggat gcaggcaagg acccaaagaa
      51  gaacaccagc agtagcaaag gcgctggtac gagcaacaaa gatgtaaatg
     101  ttgggtcgaa gggaaaagtt gttccacgct tgcagaagat tacaaggaag
     151  atgaatcttc caatggttga agggaagatc attctcagtt tagaccactt
     201  gcttgagtat aaacctaatc aggttgattt attcaatact cgagcaacaa
     251  gaacacagtt tgaggcatgg tacaatgcag tcaaagatga atatgaactt
     301  gatgatgagc agatgggtgt ggtcatgaat ggtttcatgg tttggtgtat
     351  cgacaatggc acatctccag acgccaatgg tgtgtgggta atgatggatg
     401  gagaagagca gattgaatat ccgctaaagc ccattgttga aaatgcgaaa
     451  ccaactctaa gacaaatcat gcaccatttt tcggatgcag ctgaagctta
     501  cattgagatg agaaattctg aaagtccgta tatgcctaga tatggattac
     551  taaggaattt gagagataga gagctagctc gctatgcctt tgatttctat
     601  gaagtcactt ccaaaacacc aaatagggca agggaggcaa tagcgcagat
     651  gaaggctgca gctctctcgg gagttaacaa caagttgttt ggacttgatg
     701  gaaacatctc aactaactcc gaaaatactg aaaggcatac tgcaagagat
     751  gtgaatcaaa acatgcacac tcttctgggc atgggtccac cgcagtaa