Sequence of DPV Cycas necrotic stunt virus
Cycas necrotic stunt virus gene for coat protein, partial cds.
ACC No: AB237656
Dated: 2007-01-05 | Length: 2173 | CRC: 365779275
ID AB237656; SV 1; linear; genomic RNA; STD; VRL; 2173 BP.
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AC AB237656;
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DT 13-APR-2006 (Rel. 87, Created)
DT 05-JAN-2007 (Rel. 90, Last updated, Version 2)
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DE Cycas necrotic stunt virus gene for coat protein, partial cds.
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KW .
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OS Cycas necrotic stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup B.
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RN [1]
RP 1-2173
RA Iwanami T., Hanada K.;
RT ;
RL Submitted (11-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Agricultural Research Center for Kyushu Okinawa
RL region, Laboratory of Molecular Plant Pathology; Suya 2421, Nishigoshi,
RL Kumamoto 861-1192, Japan (E-mail:tiwsw37@affrc.go.jp, Tel:81-96-242-7730,
RL Fax:81-96-249-1002)
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RN [2]
RA Hanada K., Fukumoto F., Kusunoki M., Kameya-Iwaki M., Tanaka Y.,
RA Iwanami T.;
RT "Cycas necrotic stunt virus isolated from gladiolus plants in Japan";
RL J. Gen. Plant Pathol. 72:383-386(2006).
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FH Key Location/Qualifiers
FH
FT source 1. .2173
FT /organism="Cycas necrotic stunt virus"
FT /mol_type="genomic RNA"
FT /country="Japan"
FT /isolation_source="gladiolus"
FT /db_xref="taxon:173976"
FT CDS <142. .1851
FT /codon_start=1
FT /transl_table=1
FT /product="coat protein"
FT /db_xref="GOA:Q1T7B1"
FT /db_xref="InterPro:IPR000005"
FT /db_xref="InterPro:IPR005054"
FT /db_xref="InterPro:IPR005305"
FT /db_xref="InterPro:IPR005306"
FT /db_xref="UniProtKB/TrEMBL:Q1T7B1"
FT /protein_id="BAE93234.1"
FT /translation="SENAGHSVGDMKSAENFVFTQLITMPAASTKGNVLAGVDILANAR
FT TTMSGFYMRWLQKGYVDTNLKLICHLPRAPFAGISFFVLIDGTGYLAKDAPTSLNEEEI
FT LSYPLHLVTTSDVSSYEFVLDWHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVE
FT FYLEAQSVGEELPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFAK
FT SKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSKEQHVQHQAM
FT NVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKG
FT FTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQM
FT CQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGK
FT ATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSP
FT RLSVAGTTVPPVADASTSNSQSGDEDIGDQCAAALGRGRGRGSRPGPNPIRG"
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SQ Sequence 2173 BP; 529 A; 453 C; 509 G; 682 T; 0 other;
ab237656 Length: 2173 05-JAN-2007 Type: N Check: 7732 ..
1 gaagaccagg atgtggcacc cattttatct aaagcccgaa gtatgagggt
51 taagacattt gggagcttca gagcaggtaa aattcctgtg aattttctgg
101 gcactccatc cagcggccag attgcgtcca ggcatagcat ctctgagaat
151 gctggacata gtgtgggtga tatgaaaagc gctgaaaatt ttgttttcac
201 tcaacttatt acaatgccag ctgctagcac aaagggtaat gtgttggcag
251 gggtcgatat tctggcgaat gcacggacca ccatgagtgg gttttatatg
301 cgttggttgc aaaagggcta tgttgacacg aatcttaagt taatttgcca
351 ccttccacgt gctccgtttg ctggaatttc tttctttgtg cttattgatg
401 gtacgggata ccttgcaaaa gatgctccga ccagtttgaa tgaggaggaa
451 attctttctt acccactgca tttggttacc acatccgatg tttccagtta
501 cgaatttgta ctggattggc atcgttacat aggccaggta ccatttgctg
551 aagaaaatgc ttttttgagg cctactctct tcctggtggc atgcgtttcc
601 tccacacttg ctctttctgc aaaagttgag ttttatcttg aagcacagag
651 tgtgggggag gaactaccac gaactttggc accaagccca gttctctcct
701 atccttttca gaactctttt cttgaggatt tggacttgtt cctaccccca
751 aaacgtttga cacttgggga gagagaaaca actatcatcc cactttcatt
801 tgctaaatcc aagaagagtg gcgatgcagt tctttactct catgcagcag
851 cgcgcttggc ccacttccaa gggattggag gtgttcttca tggtgtggtc
901 tacttggtag gctctcaatt ggttgccagc aagctgcata tttccatgtg
951 gagtaaagaa cagcacgttc agcatcaagc aatgaatgtg catgttgaca
1001 ctgatacagg agtggcattt gatttaccaa tcaaagatgc tttttatgcc
1051 tcttctgtgt atggtgactc tggagcagtt attcaaataa catgcctatg
1101 ttccccgatg tcaccaaatg ctataaaggc cccttttgat atggtcttta
1151 agataaaggg tttcaccccg gatgcaccca tgtgccgcac tataaatttt
1201 actcagcggt tcgggtggtt tgctgttgaa ccgactacct ccacaggggc
1251 cataaaactt aaaatttggc ctgtgtcaaa ccacctggag tctgaggaca
1301 tgaaagttac tggctacact aatgcctttt tgcaaatgtg ccaaactagc
1351 actatgcatt ttggttcagt gattatccat ttttcctgga ctctatttgg
1401 tggtaccaca aatgctgcta ctgctggtgg ggtagttacc atagcagagg
1451 gttttggtcc tgaagaagag aactttcgtg gccattgtag gaatttttcc
1501 atatatgaag gaaaggccac agttcctctt gaattaggaa catttgcggg
1551 tcccactccc ctgaagaagt tggatttcaa atatcgcaac tggatccgct
1601 ttacaactcc caagggcagg aatatctcta gtattttctg tgctatagaa
1651 gtgttgccag gattttcctt ttatgggcgt actggtagtc ctagacttag
1701 tgttgctggt actactgtac cgccagtcgc tgatgcaagc actagcaatt
1751 cccagagtgg agatgaagat attggggatc agtgtgctgc tgccttgggt
1801 agggggagag gacgtggttc tcgtccaggg ccaaacccta ttaggggttg
1851 atttcttagg tatttcttag agagaatatc cccccaggct tcaatggggt
1901 tctgttttga ggcaaatttg gtgtcgggat aaccaaattc aaataacccg
1951 tcttatccat ctgaatgatg cgcgtttatt gcacacgcgg cgaagctcaa
2001 gtgcaactgc attttctttt ggtttgtttc gtttggtttg tgttttagtt
2051 attgctttct tttaattatg ttttaagtgg cgataaatga ggtttgtcct
2101 tttcctcatt ttgctttgtt ggacacaaaa agattttcta tttcttttgt
2151 atattagaaa acccaaaaaa ccc