Sequence of DPV Phaius virus X
Phaius virus X genomic RNA, complete genome.
ACC No: AB353071
Dated: 2009-01-27 | Length: 5816 | CRC: 1887240750
ID AB353071; SV 1; linear; genomic RNA; STD; VRL; 5816 BP.
XX
AC AB353071;
XX
DT 27-JAN-2008 (Rel. 94, Created)
DT 27-JAN-2009 (Rel. 99, Last updated, Version 4)
XX
DE Phaius virus X genomic RNA, complete genome.
XX
KW .
XX
OS Phaius virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus; unclassified Potexvirus.
XX
RN [1]
RP 1-5816
RA Fuji S., Kawakami K., Miyoshi K.;
RT ;
RL Submitted (25-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shin-ichi Fuji Akita Prefectural University, Bioresource Sciences;
RL Shimoshinjo, Akita, Akita 010-0195, Japan
XX
RN [2]
RA Kawakami K., Fuji S., Miyoshi K.;
RT "Complete nucleotide sequence of a new potexvirus, "Phaius virus X",
RT isolated from Phaius flavus Lindl.";
RL Arch. Virol. 153:527-531(2008).
XX
FH Key Location/Qualifiers
FH
FT source 1. .5816
FT /organism="Phaius virus X"
FT /host="Phaius flavus f. flavus"
FT /mol_type="genomic RNA"
FT /country="Japan"
FT /db_xref="taxon:457382"
FT CDS 68. .3964
FT /codon_start=1
FT /transl_table=1
FT /product="replicase protein"
FT /note="ORF1"
FT /db_xref="GOA:B0I2Z2"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR001788"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:B0I2Z2"
FT /protein_id="BAG06154.1"
FT /translation="MALLAAALDRFTDVSIKSVIQEEQLQNFRKALTQASTIMPYAASP
FT AAANALEAMGIITNPFAAHVHTHAAAKAIENQLLKVVGLALPQEPVTFYFLKRQKLNAL
FT GRNPRLKDIFNNQLIEPRDFARYTPDTWCDHLIAPTTPIAYISDALHFLTPHFVMSMFK
FT HNPVLKTLYATLVLPPEAMHRHPSQMPEVYTINYDYGGFQYLPGGHGGGAYHHEFSSLE
FT WLKAGHLTYPDPATGRRLTVTVQMQESLGANHLFIFTRGKLLTPRVRTFSQNQSVVLPK
FT LFHPTQLCASNPIPKTFAMQMLLYAKSVKEVTFRDIMAKIRQLIPTSELHRYQPDELIH
FT IANYFYFVTHRDAICANSHVLDSSWFTQGFNAMAEKLKHHWREYFGKTSFEKLLAMLDW
FT QVFTYSLEVEEIVVESPFFPKPGSVEDLRNDPWELPESMPEDSDSEDEAKPSTPPPQPI
FT QSVDPDNVLPWSNCLHILKACGFQGNQRQYCGEEPIMPIKDIRKLPDAEAPDAPEELIT
FT RLKAIRRHPTLVTMDVSRGKAYASDVKNNRVGAVLRNETVEWKKNFATRVELGNRTLPV
FT VVIHGAGGSGKSHVLQEFLRNQAHGYDQVGLVLPTVELRADWMAKVPKMKERNFRTFEK
FT AMVQPSPRTVIMDDYSKLPAGYVEAFCLFHPEVRTLILTGDPQQTSHYEANDQAMSSKL
FT APAVEVFAPYCRYYLNATHRNKRDLANMLGVYGEQAGSTHITKSSTTLSGWPIIAPSLA
FT KKTCLTELGHRAYSYAGCQGLTTPRVQILLDNNTALCSKEAMYTALSRARDAIHFINTG
FT PNSTEYWQKLSATPYLKAFLDLHREEVATAVEAPAPAEPEIVPEPKTHFPATNAGMLLE
FT PMKEALIDKYDRELLDSRHGYTNAIQTEDSTVQLFQHQQAKDEALLFKTIEARIKISSV
FT KGNELEYVMKKDIGDILFLNYKRVMKLPDHPIPFCQELWDSSKAEVQARYLDKPIQNLI
FT NGKDRQCPDFPKQQIALFLKSQWVKKTEKIGAIPVKPGQTIASFMQETVMLYGTMARYM
FT RRLRRAYQPSNIFITCENTPEELDSWVKERWKFSRPAHSNDFTAFDQSQDGAMLQFEVI
FT KAKHHSIPEDIIESYVRLKTNAHIFLGVIAIMRLSGEGPTFDANTECAIAYHHTKYRVS
FT DDTSQLYAGDDMAQDNTPILKESFSMISDKLTLTSKEVKHAQTPGEYATFCGWMITPQG
FT ILKEPKKLYASLALAKAIGKEDEVRVNYAHDLKHAYSMGDKLHDVLTEEQASYHQATTR
FT ELHLMGCNAILNQL"
FT CDS 3993. .4637
FT /codon_start=1
FT /transl_table=1
FT /product="triple gene block protein 1"
FT /note="ORF2"
FT /db_xref="GOA:B0I2Z3"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="UniProtKB/TrEMBL:B0I2Z3"
FT /protein_id="BAG06155.1"
FT /translation="MELYTGELQQKFHRTNVPLKFPIVLHTVAGAGKTTFVRQLINKYS
FT HLTACTFGTPDPPNLLGRYITAPCPFPDVVDEYPLCEEYSGVKLLVADPLQHRRGVLPA
FT HYTGTHTFRFGKSTCDLLKTLGVVATSDKEDIVSRHPAFNFDPEGLIIALGPEAVELLE
FT AHSLPFLRPCQALGLTTSVVTLLTDKPLDEQDPVDAYISITRHTDKLNILS"
FT CDS 4637. .4975
FT /codon_start=1
FT /transl_table=1
FT /product="triple gene block protein 2"
FT /note="ORF3"
FT /db_xref="InterPro:IPR001896"
FT /db_xref="UniProtKB/TrEMBL:B0I2Z4"
FT /protein_id="BAG06156.1"
FT /translation="MPLQPPTDYTRIYSFLVIGVSCVTILYLLTRSTLPHVGDNIHHLP
FT HGGCYRDGTKSIYYGSAKRGSHPYPDKLWAFLAISGLVFAIYWTRPRRACPCTCPRCVE
FT PSAVPNNN"
FT CDS 4773. .5153
FT /codon_start=1
FT /transl_table=1
FT /product="triple gene block protein 3"
FT /note="ORF4"
FT /db_xref="InterPro:IPR003411"
FT /db_xref="UniProtKB/TrEMBL:B0I2Z5"
FT /protein_id="BAG06157.1"
FT /translation="MEAATGMARSPYTTAQQREGATPTLTSSGLSWLFQGSSLPFIGLG
FT LAALALALALGVSNPRQCLITIDGAGAILQGCGEIQDLPAVINALHYAKGLSYPNIRNC
FT EYGYHEHCEQVRSCEHASLDGP"
FT CDS 5089. .5712
FT /codon_start=1
FT /transl_table=1
FT /product="coat protein"
FT /note="ORF5"
FT /db_xref="GOA:B0I2Z6"
FT /db_xref="InterPro:IPR000052"
FT /db_xref="UniProtKB/TrEMBL:B0I2Z6"
FT /protein_id="BAG06158.1"
FT /translation="MATTNTVSKFGPANMQAWMDLKYEPTSESLVSEGELLKIQEQWAA
FT IGVTGDFFTVAFQVAMVCSDAHSGSQTVLPGMCNQHPNIPLSAIGGIIRNVTTLRRFCR
FT YYAKFVWNYRVANALPPANWAELEFTEETKYAAFDFFDGVTNVAALDPPNGLVRNPSER
FT EFQASRINRYAAIARVASSGFTTTAAEVTKGRATAYQVHLLDAP"
XX
SQ Sequence 5816 BP; 1587 A; 1591 C; 1370 G; 1268 T; 0 other;
ab353071 Length: 5816 27-JAN-2009 Type: N Check: 8506 ..
1 gaaaagtaac caaaacgact cggccaaccc caagatcact caaatcccag
51 taaggcaaga ctgatctatg gcgttacttg cagcggccct cgaccggttc
101 actgatgtgt ccattaagtc agtgattcag gaagaacaat tacaaaactt
151 ccggaaagca ctcactcaag ccagtaccat catgccctac gcagcctccc
201 ctgctgcggc aaacgcgctg gaagccatgg gcataattac caacccattc
251 gctgcccacg tgcacactca cgcggccgcc aaagccattg agaatcaact
301 tctcaaggtg gttggcctcg cccttcccca ggaacccgtg acattttact
351 ttctgaagcg ccagaagttg aatgccttgg gaaggaaccc gcggctcaaa
401 gatatattca acaatcaatt gattgagcct agggactttg cgcgatacac
451 tcctgataca tggtgtgacc acttaattgc acccaccacc ccgatagcct
501 acatatcaga cgcactacac ttcctaactc cccattttgt gatgtctatg
551 ttcaaacaca accctgtgtt aaagactttg tatgccactc tggttctacc
601 accagaggcc atgcatcgac atccatccca gatgcccgaa gtgtacacaa
651 tcaactatga ctacgggggc ttccagtact tacctggagg tcacggtgga
701 ggagcctacc accatgaatt cagctcctta gagtggctca aggctggcca
751 cttgacatat cctgacccag caaccggtag acggctgacg gtcactgttc
801 agatgcagga gagcctaggg gcgaaccacc tcttcatatt cactagaggt
851 aaattattaa cgccccgggt gcggaccttt tcgcagaacc agagtgtagt
901 tctgcccaag cttttccacc ccacccaact atgtgcttcc aacccaattc
951 caaaaacatt cgccatgcaa atgttactat acgccaagag cgttaaggaa
1001 gtcacattcc gggacatcat ggccaaaata aggcagctga tcccgacgtc
1051 tgagttgcac agataccaac cagacgagct catccacata gcgaattact
1101 tctacttcgt cacccaccgt gacgctatat gcgctaactc ccacgtccta
1151 gattccagtt ggttcacgca aggcttcaat gccatggctg aaaaactgaa
1201 gcaccattgg agggagtact ttgggaagac cagtttcgaa aaactgcttg
1251 ccatgctcga ctggcaagtc tttacctatt cattagaagt ggaggagatt
1301 gttgtggagt ctcctttctt cccaaaacct gggtctgtgg aagatctccg
1351 caatgaccca tgggaattac ctgagtcgat gccggaagac tcagattctg
1401 aagatgaggc caagccttca actccccctc cacagcccat tcaatcagta
1451 gaccctgaca atgtcttacc ctggagtaac tgcctacaca tactcaaagc
1501 ttgtggcttc cagggcaatc agaggcaata ctgtggagag gaacccatca
1551 tgcccatcaa ggacatcagg aagctacctg atgctgaagc ccctgacgca
1601 ccagaagagc tgatcactag actcaaagcg atcaggaggc atcccactct
1651 agtcaccatg gatgtaagta gaggcaaagc ttacgccagt gacgtgaaga
1701 ataatagggt aggcgcggtc ctacgaaatg aaaccgtgga gtggaagaag
1751 aattttgcga cccgagtcga gcttgggaac aggacactgc ccgttgtggt
1801 catacacggg gcaggcggat caggcaaatc acatgtcctg caagaattct
1851 tacgtaacca ggcacatggt tacgaccagg tgggactagt gctgcccacc
1901 gtggagctga gggccgactg gatggcaaaa gtgcctaaaa tgaaagagcg
1951 caatttccgt acttttgaga aggctatggt ccaaccctca ccacgtactg
2001 taataatgga cgactatagc aagctacctg cgggttacgt ggaggctttc
2051 tgcctgttcc accctgaagt tcggaccctg attttaacag gggatccgca
2101 gcagacctca cattatgagg ccaatgacca agccatgtct tcaaaactgg
2151 ccccagcggt tgaggtgttt gccccttatt gccgttatta cctcaatgca
2201 acccatcgca ataagcgtga tttggccaat atgttaggtg tatatggcga
2251 gcaagcaggc tctacccata tcaccaagtc ctccactaca ttatcaggct
2301 ggccaatcat agccccatcg ctggccaaga aaacctgctt aacagagttg
2351 ggtcaccgag cgtactccta cgctgggtgt cagggcctga ccacaccgcg
2401 ggtacaaata ctactagata acaacacagc cctctgttcc aaggaggcca
2451 tgtacaccgc actgtcccga gcgcgagacg ctatccattt catcaacacg
2501 ggacccaact caacagagta ctggcaaaaa cttagtgcca cgccgtactt
2551 gaaagccttc ctggacctgc accgggaaga ggtggccact gccgtggagg
2601 cgccagcacc ggctgaacct gaaatagtgc cggagcctaa aactcacttc
2651 cccgcaacca acgcgggtat gctgctggaa cctatgaaag aagcgcttat
2701 agataagtat gaccgagagc tgctcgactc acgccatggt tataccaacg
2751 ctatacagac tgaggacagt actgttcagc tgttccaaca ccagcaagca
2801 aaagatgagg ctctactatt caaaacgata gaggcgagga tcaagatatc
2851 gagtgtcaaa ggcaacgagc tggagtatgt catgaagaaa gatatagggg
2901 acatcctatt ccttaattac aaaagagtca tgaagttgcc agaccaccct
2951 attcctttct gccaggaatt gtgggactcc tccaaagccg aagtgcaggc
3001 gaggtatctg gacaaaccaa tccagaacct cattaatgga aaggacagac
3051 agtgcccgga ctttccaaag caacaaatcg ccctcttctt gaagtcacag
3101 tgggtcaaga agactgagaa gataggagcc atccctgtca aacccggaca
3151 gaccatagct tcctttatgc aggagacggt catgctgtac gggactatgg
3201 ctcgatacat gaggcgacta agacgggcct accaaccatc caacatattt
3251 atcacctgcg aaaacacgcc agaggaactg gatagttggg tcaaggaacg
3301 ctggaaattt tctagaccag cacacagcaa tgacttcaca gctttcgacc
3351 aatcccagga tggcgccatg ctgcaatttg aagtcatcaa ggccaagcat
3401 cactccatac ctgaagacat aattgaatcc tatgtgcgtc tcaaaacaaa
3451 cgcacatatt ttcctgggag tgatagccat aatgagatta tccggggagg
3501 ggccaacctt tgacgccaac accgaatgtg ccatagctta ccatcacact
3551 aagtacagag tgtctgacga taccagtcag ctatacgctg gggatgatat
3601 ggcgcaggat aacaccccca tcctgaagga atcttttagc atgatttctg
3651 ataaactgac cctaacttca aaagaagtta aacatgctca gacgcccggg
3701 gaatacgcaa cgttctgtgg ttggatgatt accccacaag gcatacttaa
3751 ggaaccaaag aaattgtatg cctccctggc gctcgctaaa gctataggta
3801 aggaagatga agtccgggtc aactacgcgc atgacctgaa acacgcatac
3851 agcatgggcg ataagttgca tgatgtgctc actgaggagc aagcttccta
3901 ccaccaagcc acaactcggg agttacacct catggggtgt aacgccatct
3951 taaaccagct ttagtaaagg ggttaagttt cccgtgtatt gaatggagtt
4001 gtacacggga gagctacagc agaaattcca tcggacaaac gtgccactga
4051 aattccctat agtcttgcat acagtagccg gagcaggcaa gactacgttc
4101 gtccgtcaac tgatcaacaa gtacagtcat ctgactgctt gcaccttcgg
4151 cacccctgat ccacccaact tactaggtag atatataact gcaccctgcc
4201 cctttccaga cgtggtggac gagtaccctc tctgcgagga atactcgggg
4251 gtcaagctgc tagttgctga cccactacag catagaagag gcgtactacc
4301 cgcccactac acaggaactc acactttcag gtttggcaaa tccacttgtg
4351 acctactgaa gactctggga gtggtagcca cctcagataa agaagatatt
4401 gtgagtaggc acccagcttt caattttgac cccgaaggtc tgataatagc
4451 actggggcct gaggcggtgg agttattgga agcccactcc ctgcctttcc
4501 tacgtccttg ccaagctctt ggactgacca catctgtggt caccttgctg
4551 accgacaaac ctctcgacga gcaggaccct gtggacgctt acatttcaat
4601 aacgaggcac acggacaagc tcaacatcct gagctgatgc ctctacaacc
4651 acccacagac tacacacgca tttactcatt cttagtcata ggcgtatcgt
4701 gtgtaacgat actgtacctg ctcacacgca gcaccctgcc ccatgtagga
4751 gacaacatac atcacctacc tcatggaggc tgctacaggg atggcacgaa
4801 gtccatatac tacggctcag caaagagagg gagccacccc taccctgaca
4851 agctctgggc tttcttggct atttcagggc tcgtctttgc catttattgg
4901 actcggcctc gccgcgcttg cccttgcact tgccctaggt gtgtcgaacc
4951 ctcggcagtg cctaataaca attgatggcg cgggggccat actccagggc
5001 tgcggggaaa ttcaagactt acccgcggta attaacgccc tgcactacgc
5051 aaaggggtta agttacccta atattcgaaa ttgcgagtat ggctaccacg
5101 aacactgtga gcaagttcgg tcctgcgaac atgcaagctt ggatggacct
5151 taaatatgaa cccacctctg agagcctggt gtcagagggt gaactactga
5201 agatccagga acaatgggct gccattggag tgaccgggga tttcttcacg
5251 gtcgcattcc aagtcgccat ggtgtgtagc gacgcccatt ctggaagcca
5301 aacagtgttg cctggtatgt gcaaccaaca cccgaacata cccttatcag
5351 ctataggagg tattattagg aacgtcacga ccttgcgccg attctgccga
5401 tactatgcga agttcgtctg gaactatcgc gtcgccaatg cgctgccccc
5451 tgccaactgg gcagagttag aatttactga ggagacgaag tatgcagcct
5501 tcgacttctt tgacggcgtg actaacgtag ctgccctgga cccgcctaac
5551 ggattggtca ggaacccttc tgagagggag ttccaagcgt ccaggattaa
5601 taggtacgca gccattgcgc gtgtcgccag ctctggcttc acgactactg
5651 ccgctgaggt cactaagggt agggccacag cctatcaggt gcacctactg
5701 gatgcacctt aactgggaga aggacactcc cccgcgcata atgacatggt
5751 ttaaaccccc cactagacat tagaacttaa tataatgtgt ggttgcatgc
5801 tcgacgaagc atggat