Sequence of DPV Peanut stunt virus
Peanut stunt virus genomic RNA, segment RNA1, complete sequence.
ACC No: AB360968
Dated: 2008-09-06 | Length: 3355 | CRC: -1885066229
ID AB360968; SV 1; linear; genomic RNA; STD; VRL; 3355 BP.
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AC AB360968;
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DT 13-SEP-2007 (Rel. 93, Created)
DT 06-SEP-2008 (Rel. 97, Last updated, Version 2)
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DE Peanut stunt virus genomic RNA, segment RNA1, complete sequence.
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KW .
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OS Peanut stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
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RN [1]
RP 1-3355
RA Suzuki M., Netsu O., Ugaki M., Hibi T.;
RT ;
RL Submitted (11-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL Contact:Masashi Suzuki The University of Tokyo, Department of Integrated
RL Biosciences; 5-1-5, Kashiwanoha, Kashiwa, Chiba 2778562, Japan
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RN [2]
RA Netsu O., Hiratsuka K., Kuwata S., Hibi T., Ugaki M., Suzuki M.;
RT "Peanut stunt virus 2b cistron plays a role in viral local and systemic
RT accumulation and virulence in Nicotiana benthamiana";
RL Arch. Virol. 153:1731-1735(2008).
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RN [3]
RA Suzuki M., Yoshida M., Yoshinuma T., Hibi T.;
RT "Interaction of replicase components between Cucumber mosaic virus and
RT Peanut stunt virus";
RL J. Gen. Virol. 84:1931-1939(2003).
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FH Key Location/Qualifiers
FH
FT source 1. .3355
FT /organism="Peanut stunt virus"
FT /segment="RNA1"
FT /strain="J2"
FT /mol_type="genomic RNA"
FT /country="Japan"
FT /collected_by="Tsuneo Tsuchizaki"
FT /db_xref="taxon:12313"
FT CDS 91. .3108
FT /codon_start=1
FT /transl_table=1
FT /product="1a protein"
FT /db_xref="GOA:A7VN21"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR002588"
FT /db_xref="UniProtKB/TrEMBL:A7VN21"
FT /protein_id="BAF80085.1"
FT /translation="MAVSSFNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGL
FT KVYIRNRLDVKESEVIRNRYGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGL
FT RQDLVLDFGGSWVTHFLRGHNVHCCSPCLGVRDKMRHTERLLSMRKAIINDPQTFEGRQ
FT PNFCTNPAEKCDVQAHYAISIHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDS
FT GFIPELKCHWRKIKNAFSEKENASTFTSKLNLAVSGKTLIAFDFENESTMSYIHEWKNI
FT KSFLTDQTFSYNGYTYGIERCVIYAGILTYKIIGVPGECPPEVIRHCVWFPSLKDYVGL
FT KIPVSADLVEWKTVRLPLSTLRDTEEIAMRCYNDKKTWQDQFKIILGVLSSKSSTIVIN
FT GMAMQAGERVDINDYPYIGFAIMLHTKMKYEQLSLMYDAWGASIISQWWKAMTKPIRTF
FT VRLVARTLFPTLRPRSESEFLVKLSTFVTFNDECITDMGEVWDVTANAAAVAAWAVSDG
FT KQLVAEKEKALELANQQPVQNDSQPLTTVNLSTQDPPRSVTAILDPENPVVGQAELPEP
FT PELKALSFQTRSPDTRLAERASAMLEYVAYEQQLHQNVISNLQRIWCSAGGDFVTNRLE
FT GNLKFVFDTYFLTDPLVNVHFPSGRWMHPVPAGTKYMVGFNEKGLGPKMDSELYIVNAD
FT CVICNSDGLSSAVKALTAPTGTISLVDGVAGCGKTTAIKKLFQPATDLIVTANKKSAQD
FT VRMALFGASDSKEACTFVRTADSILLNDVPEVSRVLVDEVVLLHFGQLCAVMSKLKAVR
FT AICFGDSEQIAFGSRDASFDMRRSTILPDESSTSDTTFRSPQDVVPLVTRMAGKALPRG
FT AKSKYSRWLSQSKVLNSVSQRCIPSVALVDMDESRFYITMTQADKAALITRAKELQMPS
FT SFYDNKIKTVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVSFRYEFCGEL
FT KGDLIALVLATHSPLI"
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SQ Sequence 3355 BP; 867 A; 757 C; 787 G; 944 T; 0 other;
ab360968 Length: 3355 06-SEP-2008 Type: N Check: 1574 ..
1 gttttatcac gagcgtacgg ttcaatccct gcctcccctg atttaccaac
51 ttcccagttt acattttctg ttaagttatt ttaaattcct atggctgtgt
101 cctcgttcaa tcttaatgaa ttggtagcct cccacggctc ttcaggactc
151 atagcttcag ctctcgttga taaagtagcc tccgagcaac ttgaggagca
201 attgaatcat caacgcagag gtctcaaggt ctacatccga aaccggttgg
251 atgtaaagga atctgaagtg attcgaaatc ggtatggggg taagtacgac
301 ctccatctgt cccagcaaga acacgctcct catggacttg ccggtgccct
351 ccgcttgtgt gaaacacttg attgtctgga cgcctttccc cgcactggtc
401 tgaggcaaga cctcgtccta gacttcggtg gtagttgggt cacacatttc
451 ctccgcggtc ataacgtaca ttgctgctct ccttgcttgg gcgtccggga
501 taaaatgcgc catactgagc gattgttgag catgcggaaa gccattatta
551 atgatcctca aactttcgag ggtcgtcagc caaacttttg cacaaatccg
601 gctgagaaat gcgacgtaca agcccattac gccatttcta tacatggagg
651 atatgatatg ggtttcgagg gactctgtag agctatgaat gctcacggaa
701 ccacgtttct aaaggggacg atgatgtttg acggggcaat gttatttgac
751 gattcgggct ttattcccga attgaagtgt cactggagaa aaatcaagaa
801 cgctttcagt gagaaggaga atgcttcgac gttcacctct aagttgaatt
851 tggccgtgtc cgggaagact cttattgctt ttgatttcga aaacgaatct
901 actatgtctt atattcatga gtggaagaac ataaagtctt tcttgacgga
951 tcaaactttc tcctataatg gctacaccta tggcatcgaa cgttgtgtga
1001 tctacgctgg tattttgacc tataaaatta taggcgtgcc tggtgagtgc
1051 ccccctgaag ttatcagaca ttgtgtgtgg tttccctcct tgaaggacta
1101 tgtcggctta aaaattcctg tgtccgctga cttagttgaa tggaaaactg
1151 ttcgcctacc actttccact cttcgtgaca ctgaagagat agctatgagg
1201 tgttataatg ataagaaaac gtggcaagat caattcaaga tcatcttagg
1251 tgtcttgtca tcgaaatcat ccaccatagt tattaatggt atggcaatgc
1301 aagcaggtga gcgcgttgat atcaatgatt acccttacat agggttcgct
1351 ataatgctgc atacaaaaat gaaatatgaa cagttgagct taatgtatga
1401 cgcctggggc gcttccatca tcagtcaatg gtggaaggct atgactaagc
1451 ccatcagaac gttcgtgagg ctagttgccc gaactctgtt tcctaccttg
1501 cgtccccgaa gtgagagtga attcctagta aaactttcta cctttgtcac
1551 atttaacgat gagtgcataa ccgacatggg agaagtctgg gacgtaacag
1601 ccaatgccgc tgcggtcgcc gcatgggccg tgtccgatgg aaaacaattg
1651 gttgcagaaa aagaaaaagc cctggaattg gccaatcagc aacccgtgca
1701 aaacgactct caaccattga ccactgttaa tctttcaact caagacccgc
1751 ctcgctctgt gaccgcaatt ttagatcctg agaatcctgt cgtcggtcaa
1801 gccgagttac ccgaaccccc agagcttaag gctttatcct tccaaactag
1851 atcccccgac accaggttag ctgagagagc ttccgctatg ttggagtatg
1901 ttgcttacga gcagcaacta catcagaatg ttatttcgaa cctacagcgg
1951 atatggtgtt cggctggtgg tgatttcgta acgaacagac ttgagggtaa
2001 tttgaaattc gtatttgata catatttctt aaccgatcct ctagttaatg
2051 tgcactttcc cagtgggaga tggatgcacc ctgttccagc tgggacgaaa
2101 tatatggtcg gatttaatga aaaaggtttg ggtccaaaaa tggacagtga
2151 gttgtacata gtcaatgccg actgtgtgat atgcaacagt gatggattat
2201 ccagtgccgt gaaggcttta acggctccta ctggtaccat tagcttggtc
2251 gatggtgtgg ctggttgcgg gaaaactaca gccattaaga aactatttca
2301 acccgcaacg gatctcatcg tgactgctaa caaaaaatca gcacaggatg
2351 tcagaatggc tctttttgga gcctcagatt cgaaagaagc ttgtaccttt
2401 gtgagaaccg cagattctat tctgttgaat gatgttcccg aggtgtccag
2451 agtgctggta gatgaggttg tgttactcca ctttgggcag ttgtgtgctg
2501 tgatgtctaa gctaaaagct gttcgtgcta tatgcttcgg tgattcggaa
2551 caaattgctt tcgggtcgag ggatgcgtct tttgatatgc gtagatccac
2601 tatcctcccc gatgaatcca gcacctcgga tacgaccttc cgtagcccgc
2651 aggacgtcgt gcctctcgta actcgtatgg cgggcaaggc tctaccaaga
2701 ggcgcaaagt cgaaatattc acgttggtta tcgcaatcta aagtgctcaa
2751 ttcagtcagt caaagatgca ttcccagcgt agctcttgtt gatatggatg
2801 agtctaggtt ctatataact atgactcaag ctgacaaagc cgccttgata
2851 accagagcta aggaactaca gatgccaagt tcgttctatg ataataagat
2901 caagactgtt catgagtctc aaggcatctc agaagatcat gtgacccttg
2951 ttaggctgaa gagcactaag tgtgacctct ttaaatcctt cccttattgc
3001 ctggttgcct taactcggca taaggtgtct ttcaggtatg aattctgtgg
3051 ggagttgaaa ggtgacttaa ttgccctcgt tctggcaacg cactcccccc
3101 tcatctgata gatccaggct aagttggtag ttatattact ctaaactacc
3151 taagtcacta aacagtttta ctggtgaacg ggttgtccat ccagctaacg
3201 gctaaaatgg tcagtcttac cctgaggtaa gccgagtttc ttacaaggac
3251 tcgaggtact ttatatcatc tactcctggt gattgtgaag agccgtgtac
3301 aatgtacaca tcaggctcgg gtaccccctc ttcggagggt ttccatagga
3351 gacca