Sequence of DPV Apple fruit crinkle viroid

Apple fruit crinkle viroid RNA, Apscaviroid central conserved region, strain: hop isolate, clone: HY-M22.

ACC No: AB429175

Dated: 2008-12-14 | Length: 371 | CRC: -1930459599

                
ID   AB429175; SV 1; linear; genomic RNA; STD; VRL; 371 BP.
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AC   AB429175;
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DT   18-SEP-2008 (Rel. 97, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE   Apple fruit crinkle viroid RNA, Apscaviroid central conserved region,
DE   strain: hop isolate, clone: HY-M22.
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KW   .
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OS   Apple fruit crinkle viroid
OC   Viroids; unclassified viroids.
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RN   [1]
RP   1-371
RA   Ito-Kawaguchi Y.;
RT   ;
RL   Submitted (21-MAR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoko Ito-Kawaguchi Hirosaki University, Fac. Agric & Life Science;
RL   Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan
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RN   [2]
RX   DOI; 10.1007/s11262-008-0270-9.
RX   PUBMED; 18770018.
RA   Sano T., Isono S., Matsuki K., Kawaguchi-Ito Y., Tanaka K., Kondo K.,
RA   Iijima A., Bar-Joseph M.;
RT   "Vegetative propagation and its possible role as a genetic bottleneck in
RT   the shaping of the apple fruit crinkle viroid populations in apple and hop
RT   plants";
RL   Virus Genes 37(3):298-303(2008).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .371
FT                   /organism="Apple fruit crinkle viroid"
FT                   /host="Humulus lupulus"
FT                   /strain="hop isolate"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan"
FT                   /isolation_source="leaves & cones"
FT                   /clone="HY-M22"
FT                   /note="Viroids; Pospiviroidae; Apscaviroid"
FT                   /db_xref="taxon:190808"
FT   misc_feature    96. .111
FT                   /note="Apscaviroid central conserved region"
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SQ   Sequence 371 BP; 76 A; 104 C; 109 G; 82 T; 0 other;

ab429175 Length: 371  14-DEC-2008  Type: N  Check: 2541  ..

       1  tgggctccaa ctagtggttc ctgtggtttc acaccgaagg ccgcgaagct
      51  tggaaagaaa agatagaaaa gctgggtaag actcacctgg tgactcgtcg
     101  tcgacgaagg gtcctcagca gagcaccggc aggcgcggcg aagcggagaa
     151  cgctagccgt cctccagtgg agaactggaa aagctccggc ttttcctttt
     201  ttctgtaact ggaacgcgct gttgcgctcg ctagccagac ctgcagggaa
     251  gctagctggg tcccgctagt cgagcggact cgtcccagcg gtcccaacca
     301  gttttcttaa tcctattttt ccctgcgagc gcccggtcgt ggatacctag
     351  gatacccttg tttgggtgcc c