Sequence of DPV Apple fruit crinkle viroid

Apple fruit crinkle viroid RNA, Apscaviroid central conserved region, strain: apple isolate, clone: AN-AK8-10.

ACC No: AB429210

Dated: 2008-12-14 | Length: 372 | CRC: 644348723

                
ID   AB429210; SV 1; linear; genomic RNA; STD; VRL; 372 BP.
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AC   AB429210;
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DT   18-SEP-2008 (Rel. 97, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE   Apple fruit crinkle viroid RNA, Apscaviroid central conserved region,
DE   strain: apple isolate, clone: AN-AK8-10.
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KW   .
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OS   Apple fruit crinkle viroid
OC   Viroids; unclassified viroids.
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RN   [1]
RP   1-372
RA   Ito-Kawaguchi Y.;
RT   ;
RL   Submitted (21-MAR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoko Ito-Kawaguchi Hirosaki University, Fac. Agric & Life Science;
RL   Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan
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RN   [2]
RX   DOI; 10.1007/s11262-008-0270-9.
RX   PUBMED; 18770018.
RA   Sano T., Isono S., Matsuki K., Kawaguchi-Ito Y., Tanaka K., Kondo K.,
RA   Iijima A., Bar-Joseph M.;
RT   "Vegetative propagation and its possible role as a genetic bottleneck in
RT   the shaping of the apple fruit crinkle viroid populations in apple and hop
RT   plants";
RL   Virus Genes 37(3):298-303(2008).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .372
FT                   /organism="Apple fruit crinkle viroid"
FT                   /host="Malus x domestica"
FT                   /strain="apple isolate"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan"
FT                   /isolation_source="leaves & cones"
FT                   /clone="AN-AK8-10"
FT                   /note="Viroids; Pospiviroidae; Apscaviroid"
FT                   /db_xref="taxon:190808"
FT   misc_feature    96. .111
FT                   /note="Apscaviroid central conserved region"
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SQ   Sequence 372 BP; 76 A; 105 C; 109 G; 82 T; 0 other;

ab429210 Length: 372  14-DEC-2008  Type: N  Check: 3452  ..

       1  tgggctccaa ctagtggttc ctgtggtttc acaccgaagg ccgcgaagct
      51  tggaaaaaaa aggaagaaaa gctgggtaag actcacctgg tgactcgtcg
     101  tcgacgaagg gtcctcagca gagcaccggc aggcgtggcg aagcggagaa
     151  cgctagccgt cctccagtgg agaactggaa aagctccggc ttttcctttt
     201  tttctgtaac tggaacgcgc tgctgcgctc gctagccaga cctgcaggga
     251  agctagctgg gtcccgctag tcgagcggac tcgtcccagc ggtcccaacc
     301  agttttctta tccctatatt tccctgcgag cgcccggtcg tggataccta
     351  ggattccctt gtttgggtgc cc