Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus CP gene for coat protein, complete cds, isolate: ToCMV5-3.

ACC No: AB448693

Dated: 2011-03-02 | Length: 657 | CRC: 1385217349

                
ID   AB448693; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   AB448693;
XX
DT   02-MAR-2011 (Rel. 108, Created)
DT   02-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Cucumber mosaic virus CP gene for coat protein, complete cds, isolate:
DE   ToCMV5-3.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-657
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (17-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University, International Agricultural Development;
RL   Mine-machi 350, Utsunomiya 321-8505, Japan
XX
RN   [2]
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   "Characterization of Cucumber mosaic virus from potato and tobacco in
RT   Syria; the first report on CMV satellite RNA from potato";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .657
FT                   /organism="Cucumber mosaic virus"
FT                   /host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /isolate="ToCMV5-3"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Hama"
FT                   /collected_by="Mohamad Chikh Ali"
FT                   /collection_date="Sep-2006"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /note="Subgroup IA"
FT                   /db_xref="taxon:12305"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="BAJ79032.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 154 A; 176 C; 155 G; 172 T; 0 other;

ab448693 Length: 657  02-MAR-2011  Type: N  Check: 1891  ..

       1  atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc
      51  gcgtcgtggt tcccgctccg ccccctcctc cgcggatgct aactttagag
     101  tcttgtcgca gcagctttcg cgacttaata agacgttagc agctggtcgt
     151  ccaactatta accacccaac ctttgtaggg agtgaacgct gtagacctgg
     201  gtacacgttc acatctatta ccctaaagcc accaaaaata gaccgtgggt
     251  cttattacgg taaaaggttg ttactacctg attcagtcac ggaatatgat
     301  aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtga cagtccgtaa agttcctgcc tcctcggact
     401  tatccgttgc cgccatctct gctatgttcg cggacggagc ctcaccggta
     451  ctggtttatc agtatgccgc atctggagtc caagccaaca acaaactgtt
     501  gtatgatctt tcggcgatgc gcgctgatat aggtgacatg agaaagtacg
     551  ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga cgagctagta
     601  cttcatgttg acatcgagca ccaacgcatt cccacgtctg gggtgctccc
     651  agtctga