Sequence of DPV Bamboo mosaic virus
Bamboo mosaic virus genomic RNA, complete genome, isolate: BaMV-Bo.
ACC No: AB543679
Dated: 2010-04-07 | Length: 6365 | CRC: -123185861
ID AB543679; SV 1; linear; genomic RNA; STD; VRL; 6365 BP.
XX
AC AB543679;
XX
DT 07-APR-2010 (Rel. 104, Created)
DT 07-APR-2010 (Rel. 104, Last updated, Version 1)
XX
DE Bamboo mosaic virus genomic RNA, complete genome, isolate: BaMV-Bo.
XX
KW .
XX
OS Bamboo mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC Alphaflexiviridae; Potexvirus.
XX
RN [1]
RP 1-6365
RA Hisamoto Y., Kobayashi M.;
RT ;
RL Submitted (27-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL Contact:Yoko Hisamoto Utsunomiya University, Department of Forest Science;
RL Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan
XX
RN [2]
RA Hisamoto Y., Kobayashi M.;
RT "Nucleotide sequence of the genomic RNA of bamboo mosaic potexvirus";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6365
FT /organism="Bamboo mosaic virus"
FT /host="Bambusa oldhamii"
FT /isolate="BaMV-Bo"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:35286"
FT CDS 93. .4190
FT /codon_start=1
FT /transl_table=1
FT /note="ORF1"
FT /protein_id="BAI94830.1"
FT /translation="MALVSKVFDSITDPSLRAVLQEEAHSQVKQVLKDTALYSRYALLP
FT TAANTLERYAIPHNPFSTKLHTHAAAKALENDLYRTASYLLPKERVSFLFMKPSKMQYF
FT RRRGDVDTFINADIVAKDLARYPLETIYPRLPEITTKMAFIGDSLHYFQPEVLEHIFES
FT SPQLETLLATIVLPPEATLRLKSLYPEIYTLHYMPQKFLYKPGGLSGGEYEHDYKDLTW
FT LKIGHVTTASMCLTVDRVESKAANHLLLIRRGRLKLSTYRSYDTPEPLVVVPKIFLPPK
FT YNAQKPITKTKANSWILYVKSAGEPKIRDVWAKLRQTIANSELNQYEPAELLLLTNYFY
FT VLGKLDSITSFETLLGDNILKRLFRPAIAKIQELRHWVSGPTAFMQLYKALQLVDVDFT
FT FEVTKNWETNQENHKEPELPKDAIDVLVQSLIGINYTDATTTEAASPNQQENESKPQST
FT LPQPLQQTKCPEDAEASASLECKAAETAQEACKAGPSSNPTLNTSQEAPPSELKNNEER
FT TCPTSRELPWKAWLKLLKGLGFQGDQEQLDIEGDLIYPIKHIRHLPIEEFNSPITVTLR
FT KMNRMPCKYSPDIERAAAFARDVMSNKTGAILPKQSHEWKTTLKRKCKLAPRQTLISVI
FT HGAGGSGKSRALQEYMRNNKEDPIVTILPTNELRADWKAKLPAHDPDMFMTFENALLIP
FT KGNVVIMDDYTKLPRGYIEAYVQNSPMLDLLILTGDPRQSEHFESAEGNTINDLSPSPA
FT VFSAYARYYINATHRNNQDLANALGVYSEKQGKTRISVSNHIEDGRHTLVPSQIKQRNY
FT VSMGRKTSTYAGCQGITASRVQVIIDNDTAKCSHQVLYTAFSRAADEIHFCNTMTDEKQ
FT FWAKVKCTPYLQAILNLTKEHSLPDPKPEPDEPLEPKAPVTHIAVENVVPLVEEITEPL
FT PEKHDREIYSESTGHSNCIQTENEFIQAFQHQQAKDETLFWATIEKRIVTSTPESNWTE
FT FKTKRPLGDILWLAYKEAMCLPAEPIKFDPDLWWKCADEVQNKYLQKPLHMIKNGILRQ
FT SPDFGERHIALFLKSQWVKKSEKIGTVNVKAGQTIAAFYQSTVMIFGTMARYMRRVREK
FT FCPKNILINCEIDQPTASKWVDTHWKFDRLAYTNDFEAYDQSQDGAMLQFEVMKARHHD
FT LPADLIESYIELKLNAKIFLGTLGIMRLTGEGPTFDANTECNIAYTHARFHIPRGTAQL
FT HAGDDCALNCEPEERESFKPLAAQFTLKSKPVTIRQGKGSWPEFCGNIITPYGYLKHPR
FT KTWAALHKAKLQGKDELKKTATAYALDVLPTYELGDAIHDIFTDNELTFHYQTIRTLHT
FT EAHTRVFTNHDAIFGEEGLFSS"
FT CDS 4217. .4978
FT /codon_start=1
FT /transl_table=1
FT /note="ORF2"
FT /protein_id="BAI94831.1"
FT /translation="MDNRITDLLTRSGYARTSEPRGAGQQLVVHAVAGAGKTTLLREIL
FT NTIPGVTIHTAGTPDPPNLTLNYIKGQEPPCPKKYTILDEYPARAKWPEEAWDMLIADN
FT LQHTGPTTRPHYIKHTTYRLGPQTVKALQSLGYQLEFQHRVDQQDQGFSFTGLFDGPIY
FT GQPITLDTAAHNLALAHGLPALQATQTRGLEYDTTTIISSTPLPTVKDKVGLYIAFTRH
FT RKACHIRAPGVDPTRDVVSSHGPTSPSSQTT"
FT CDS 4944. .5303
FT /codon_start=1
FT /transl_table=1
FT /note="ORF3"
FT /protein_id="BAI94832.1"
FT /translation="MDQPLHLARPPDNTKAYLVLAIGVASALFLYTLTRNTLPHTGDNI
FT HHLPHGGRYVDGTKGILYNSPTSSYPSSSLPFSTVIALATTLFLITRNILNPAQTTPRV
FT YAPLCLHCHRSHPPC"
FT CDS 5297. .5455
FT /codon_start=1
FT /transl_table=1
FT /note="ORF4"
FT /protein_id="BAI94833.1"
FT /translation="MLNTDTLCIILFILLLGVLYNILHQHQPPPCEIVINGHTISIRGN
FT CYHTTSS"
FT CDS 5497. .6225
FT /codon_start=1
FT /transl_table=1
FT /note="ORF5"
FT /protein_id="BAI94834.1"
FT /translation="MSGTGTGTGRGTGTGAGGTGGTGGTGGGGTGRGQQAAAQPWEAKF
FT TKDDLAAIEPKPASANVPNTKQWTSIQAGLIKAGATDANFMKVLLGLSLEAFDRGSSEA
FT TTWDGVTEGVEHRAAANAIKEANCPIHKVTYYLAKPTFAIRQSKNLPPANYAKKNVPSQ
FT YKWCAFDAFDGLYDPTCLASELPYDAPSEIDRMAYATFKTIQIKTANDQKGFNLNYNPN
FT VTQARLPNAPLPALPEPTSD"
XX
SQ Sequence 6365 BP; 1933 A; 1899 C; 1340 G; 1193 T; 0 other;
ab543679 Length: 6365 07-APR-2010 Type: N Check: 8763 ..
1 gaaaagcatt ccaaacaaac gaaaaggaaa caaaagacat agaaaacgaa
51 ctgccaattg tcccctacaa tcgccccgcg cgtgcggcaa caatggcact
101 cgtctctaaa gtcttcgata gcatcaccga cccatccctg agggctgtac
151 tccaagaaga agcgcattca caggtgaaac aggtgctcaa agacaccgcg
201 ctgtactcaa gatacgccct cctcccaact gctgcaaaca cgctcgaacg
251 gtacgccatc ccccacaacc cgttcagcac aaaattgcat acacacgcag
301 cagcaaaagc ccttgagaat gacctctacc ggacagcctc atatctcctc
351 ccaaaagaaa gagtgtcatt ccttttcatg aagccgtcta agatgcaata
401 tttccggaga agaggagacg tcgacacctt catcaacgct gatatcgtcg
451 ccaaggacct cgccaggtat cctctggaga ctatttaccc ccgcctccct
501 gaaatcacga caaagatggc tttcattggg gatagcctgc actacttcca
551 gcctgaggtg ctggaacaca ttttcgagag ctccccacaa ctagagacct
601 tgctcgccac aatcgtcctc ccccccgaag ccacacttag gcttaagagt
651 ctatacccag aaatctacac gctacactac atgccccaaa aattcctcta
701 caaacctggg gggctttcgg gcggggaata cgagcatgat tataaagacc
751 tgacctggct aaaaattggg catgtcacaa ctgcctccat gtgccttaca
801 gtcgaccggg tggagtctaa agcggccaat catctactac tcatacgtcg
851 cggaaggctc aaactcagca cttacagatc ttacgacacc cctgaacctt
901 tagtcgtagt gccaaaaatc ttcctccccc caaaatacaa tgcacaaaaa
951 cccattacca agacaaaagc aaactcgtgg attctctacg tgaagtcggc
1001 tggggagcca aaaatcagag atgtttgggc caagctcagg caaacgatag
1051 cgaactccga acttaaccaa tatgagcctg cggagttgct cctcctaaca
1101 aactacttct atgtgcttgg caagttagac tccatcacat cctttgaaac
1151 cctgctcggc gacaacatac tcaagcgcct cttcagaccg gccatagcta
1201 aaattcaaga actcagacac tgggttagtg gcccaacagc cttcatgcaa
1251 ctttacaagg cgctgcagct cgtcgacgtc gacttcacct ttgaggtcac
1301 aaagaactgg gaaacaaacc aggaaaacca caaggaacct gaactcccaa
1351 aagatgccat tgatgtactc gtccaatccc tcatcggcat taactacaca
1401 gacgcgacaa ccactgaagc cgcaagccct aaccaacaag aaaacgaatc
1451 aaaaccccaa tcgaccctcc cacagcctct ccagcaaacc aagtgccccg
1501 aggatgcgga ggcgtctgcc tcactagaat gtaaagcggc cgaaactgcg
1551 caagaagcct gcaaagcagg gcccagttca aaccccactc tcaacaccag
1601 ccaagaggcg cctccatcag aactcaaaaa caacgaggag cgaacatgcc
1651 ccacatcgcg tgaactacca tggaaggcat ggctcaaatt gctcaagggc
1701 ctcggattcc aaggcgacca ggagcagttg gacattgaag gggacctcat
1751 ttacccaatt aaacacatcc ggcacttacc aattgaggag ttcaacagcc
1801 caatcacagt gacactgagg aaaatgaacc ggatgccatg caaatattcc
1851 cctgacatcg aaagagcagc cgcattcgca cgagacgtaa tgagcaataa
1901 aacaggtgct atcctcccga agcaatccca cgagtggaag actacactca
1951 aaaggaaatg caaactagcc cctcgacaaa ccctgatttc tgtgatacat
2001 ggtgcgggcg gcagcggaaa atcaagagcc ctgcaagaat acatgaggaa
2051 caacaaggag gaccccatcg tcaccatcct cccgacgaat gagctaaggg
2101 cggattggaa agctaaactg cccgctcacg atcctgatat gttcatgaca
2151 ttcgagaacg cactgctgat cccaaaaggc aacgtggtca tcatggacga
2201 ctacactaaa ctaccacgcg ggtacataga ggcgtacgtg caaaattctc
2251 caatgctaga cctgctgata ctcacagggg accctaggca atccgaacac
2301 ttcgaatcgg ctgaagggaa cacgatcaat gaccttagcc cctccccagc
2351 tgtcttcagc gcatacgccc gctactacat caacgcaacc cacaggaata
2401 accaggactt ggcaaatgcc ttgggggtct actcagagaa acaagggaaa
2451 acacgaatat cagtcagcaa ccacattgaa gacgggcgtc acacattggt
2501 tcccagccaa atcaaacaaa gaaactacgt ctctatgggc aggaaaacct
2551 caacctacgc gggctgtcaa gggataaccg cctcgcgtgt acaggtcatc
2601 atcgacaatg acactgcaaa gtgctcacat caggtcctat acacagcttt
2651 ctccagggcc gcggatgaaa tacacttttg caacactatg accgatgaaa
2701 agcaattctg ggcaaaagtg aagtgcacgc cgtacctaca ggcgatcctc
2751 aacctgacca aggaacactc cttgcctgac ccaaagcctg aaccagacga
2801 acctctggag cccaaagccc ccgtcaccca catcgccgtg gaaaatgtgg
2851 tgccacttgt agaagaaatc actgagcccc ttcccgagaa gcacgaccgg
2901 gaaatctact cagaaagcac cgggcactcc aactgtatcc aaactgagaa
2951 cgagtttatc caggccttcc aacaccaaca ggcaaaggat gaaactctat
3001 tctgggccac cattgaaaaa cgcatagtca cctcaactcc cgagtcaaac
3051 tggactgaat tcaagacaaa aaggccccta ggcgacatcc tgtggctggc
3101 ctataaggaa gccatgtgcc taccagcgga gcccatcaaa ttcgacccag
3151 atctctggtg gaaatgtgct gatgaagtgc aaaacaagta cctacagaaa
3201 ccgcttcaca tgatcaaaaa tggaatactt agacaaagcc cagactttgg
3251 agagcgccac attgctctat ttttaaagtc gcagtgggtg aaaaagagcg
3301 agaaaattgg gacagtcaat gtcaaggcag gccaaaccat cgctgcattc
3351 taccagagca ccgtcatgat ctttggcact atggcgcgtt acatgcgacg
3401 cgtccgtgaa aagttctgcc caaagaacat tctaattaac tgcgaaattg
3451 accagccaac agcatcaaag tgggtggaca cgcactggaa attcgacagg
3501 ctggcataca caaatgactt cgaggcgtat gaccagtcgc aggatggagc
3551 tatgttgcaa ttcgaagtga tgaaggcaag gcaccatgat ctgcctgccg
3601 acttgattga gtcctacatt gaacttaagc taaacgcaaa aatattccta
3651 ggcacccttg gcatcatgag attgactgga gaggggccaa catttgacgc
3701 caacactgaa tgcaacatcg cttacacgca tgctcgattc cacataccca
3751 gaggcactgc acaactacac gcaggagatg attgcgccct caactgcgaa
3801 cctgaagaaa gagaatcatt caaacccttg gctgcacaat tcaccctcaa
3851 atcaaagcca gtgaccataa gacaaggaaa aggctcctgg cccgagtttt
3901 gcggtaatat cattactccc tacggctatc ttaaacaccc tcggaaaaca
3951 tgggctgcac tgcacaaggc caagctccaa gggaaagatg aattgaagaa
4001 aaccgccaca gcctacgcgc tcgacgtgct accaacatac gaactagggg
4051 atgcaataca cgacatattc actgacaacg agctgacctt ccattaccaa
4101 acaatcagaa ccctacacac agaggcccac actcgagttt tcaccaacca
4151 cgatgcaatc tttggtgaag aaggtttatt ctctagttaa gtaacctatt
4201 agtttaacaa ctaaccatgg ataaccggat aactgaccta ctcacaagat
4251 ctggctacgc gagaacatcc gagccaagag gtgccgggca gcagctggtc
4301 gtacacgcgg tggctggtgc cggtaagaca acgctactcc gcgaaatact
4351 aaacaccatt ccaggagtta caatacacac tgcaggcacc cccgacccac
4401 caaatctcac cctcaactac atcaaaggcc aagagccccc ctgcccaaag
4451 aagtacacta tcctagatga gtacccagcc agagccaagt ggccagagga
4501 ggcctgggac atgctgattg ccgacaacct acaacacaca ggccccacga
4551 ctcgccctca ctacataaaa cacactacct acagacttgg cccccaaaca
4601 gttaaagcgt tgcaaagcct tgggtaccaa ctagaattcc aacatcgggt
4651 agaccagcag gatcagggct tctcattcac tggactattc gacggcccaa
4701 tctacgggca accgataaca cttgacactg cagcccacaa cctggccttg
4751 gcccacggat taccagcctt acaagcaacc caaacgagag ggctagaata
4801 cgacaccacc accattatct ctagcacccc tctgccaaca gtcaaggaca
4851 aggtgggcct gtacattgca ttcaccaggc accgaaaagc ctgccacatt
4901 cgggcacccg gggttgaccc cacacgtgac gtggtctcct cccatggacc
4951 aacctctcca tctagccaga ccacctgaca acacgaaagc ctacttagta
5001 ttagctatag gagtagcgag tgcattgttc ctctacacgc taacccgcaa
5051 cactctccca cacacaggcg acaacatcca ccacttgccg cacgggggca
5101 ggtacgtgga cggcaccaaa gggattctct acaacagccc cacctcgtca
5151 tacccatcct cgtctctccc tttctccacg gtcattgcat tagccacaac
5201 ccttttcctc atcactagaa acatcctcaa tccagcccaa accacaccca
5251 gagtctacgc acccctttgc ctgcattgtc accggagtca cccaccatgc
5301 taaacactga cacactctgc atcattctgt tcatactact attaggcgta
5351 ctttataata tacttcatca gcatcagccc ccaccatgcg agatagtaat
5401 aaacgggcac actatatcca ttagaggcaa ctgctaccac actacctcca
5451 gctagggttt gttaagtttc ctttgcttgt aaattaaaca ctaaagatgt
5501 ctggaactgg aacaggaaca gggcgaggga ccggaactgg tgcgggaggc
5551 actggaggca caggcggcac aggcggcgga ggaacaggta gagggcaaca
5601 agccgcggct cagccttggg aagcgaagtt caccaaagac gacctggctg
5651 caatcgagcc aaaacctgcc tcagcgaatg tgccaaacac gaagcagtgg
5701 accagcattc aagctggact cattaaggcc ggagccaccg acgcaaactt
5751 catgaaagtg cttctcggcc tcagcctcga agccttcgac aggggttcat
5801 cagaggccac cacctgggac ggagttactg agggtgtgga gcatcgcgcc
5851 gcagccaacg cgatcaagga ggcaaactgc ccaatacaca aagtcaccta
5901 ctacctagcc aaaccgacgt tcgccatcag acaatcaaag aaccttcccc
5951 cagcaaacta tgcaaagaag aatgtgccat cacaatacaa atggtgtgct
6001 tttgatgctt ttgatggcct atatgacccc acctgccttg cctcagaact
6051 accctacgat gccccctcag aaatagatcg aatggcatac gccacattca
6101 aaaccataca gatcaaaacc gccaatgacc agaaagggtt taacctcaat
6151 tataacccta acgtcaccca ggctcgactc cccaacgcgc ccctaccagc
6201 tcttcctgaa ccaacgtcag actaaacgtt gcatggtcgt aaaacatgcc
6251 cggcttaccg tgagccgcct ttgaaagaaa ggtttacacg gactctgttg
6301 cgttacgcac gtacctaact cgtgccagca gaataaagac cttttggttt
6351 ctacagtttt ttcca