Sequence of DPV Luna virus
Luna virus genomic RNA, segment S, complete sequence, strain: LSK-1.
ACC No: AB586644
Dated: 2012-01-27 | Length: 3377 | CRC: -1477853205
ID AB586644; SV 1; linear; genomic RNA; STD; VRL; 3377 BP.
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AC AB586644;
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DT 06-OCT-2011 (Rel. 110, Created)
DT 27-JAN-2012 (Rel. 111, Last updated, Version 2)
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DE Luna virus genomic RNA, segment S, complete sequence, strain: LSK-1.
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KW .
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OS Luna virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses; unclassified Old world arenaviruses.
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RN [1]
RP 1-3377
RA Ishii A., Sawa H.;
RT ;
RL Submitted (07-SEP-2010) to the INSDC.
RL Contact:Akihiro Ishii Hokkaido University, Research Center for Zoonosis
RL Control; Kita-20, Nishi-10, Kita-ku, Sapporo, Hokkaido 001-0020, Japan
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RN [2]
RX PUBMED; 22000372.
RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B.,
RA Takada A., Mweene A., Sawa H.;
RT "Novel arenavirus, zambia";
RL Emerg. Infect. Dis. 17(10):1921-1924(2011).
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FH Key Location/Qualifiers
FH
FT source 1. .3377
FT /organism="Luna virus"
FT /segment="S"
FT /host="Mastomys natalensis"
FT /strain="LSK-1"
FT /mol_type="genomic RNA"
FT /country="Zambia:Lusaka"
FT /isolation_source="kidney of rodent specimen: CZC 09LR34"
FT /collection_date="12-Aug-2009"
FT /note="CZC (Research Center for Zoonosis Control, Hokkaido
FT University)"
FT /db_xref="taxon:883876"
FT CDS 73. .1548
FT /codon_start=1
FT /transl_table=1
FT /gene="GP"
FT /product="glycoprotein precursor"
FT /db_xref="UniProtKB/TrEMBL:G3XEV6"
FT /protein_id="BAL03411.1"
FT /translation="MGQIITFFQEVPHIIEEVMNIVLITLSLLAILKGIYNLATCGLLG
FT LISFLFLCGRSCTMVYKDNYALNSVELDMSTLNYTMPLSCSKNNTHHYIQTYNDSGLEL
FT TLTNNSILSHKFCNLSDAHKRNLYDHTLMSIVTTFHLSIPNFNQYESMACDFNGGKITV
FT QYNLSHSSPTDAANHCGTVANGVLDTFRRMHWGPAHFPNPPFTIGGVSCIQTSYQYLII
FT QNTTWEDHCQMSRPTPMGYLSLIAQRTRQLYISRRLMGTFTWTLSDSAGNDLPGGYCLQ
FT RWMLIEAEMKCFGNTAVAKCNQQHDEEFCDMLRLFDFNKEAIRRLKVEAERSINLINKA
FT VNSLINDQLIIRNHLRDLMGIPYCNYSKFWYLNDTRNGKTSLPKCWKVSNNSYLNETHF
FT SNEIEEEANNMITEMLRKEYEKRQSTTPLGLVDLFVFSTSFYLISVFLHLIKIPTHRHI
FT VGKGCPKPHRLNHMAVCSCGVFGQPGLPVRWKR"
FT CDS complement(1609. .3321)
FT /codon_start=1
FT /transl_table=1
FT /gene="NP"
FT /product="nucleoprotein"
FT /db_xref="UniProtKB/TrEMBL:G3XEV7"
FT /protein_id="BAL03412.1"
FT /translation="MSNSKEVKSFLWTQSLRRELSGFCSNVKVQVIKDAQALLHGLDFS
FT EVSNVQRLMRKEKRDDSDLKRLRDLNQAVNNLVELKSSQQKNVLRVGTLSSDDLLILAA
FT DLEKLKSKITRSERPLTAGIYMGNLTAQQLDQRKALLQMIGMGQRGPNPAVRGDGIVRV
FT WDVRNPELLNNQFGTMPSLTVACMCKQGQVDLNDVIQSLSDLGLVYTAKYPNTSDLDKL
FT AQTHPVLNLIDVNRSAINISGYNFSLSAAVKAGASLLDGGNMLETIRVSPKNIQDILKA
FT VLKVKRSLGMFISEAPGDRNPYENLLYKLCLSGDGWPYIASRTSILGRAWDNTAVDLGG
FT NSPPESKPALPGGTRLAQAQGFPTALTYSQVMELKDSMLQLDPNAKTWIDIEGRAEDPV
FT EIAILQPANGHYIHFYREPTDLKQFKQDSKHSHGLDIQDLFNVQPGLTSAVLESLPKNM
FT VLTCQGADDIRKLLESQGRRDIKLIDVGMTKPEARKFEDEIWDHYKPLCKMHTGIVVEK
FT KKRGGKEEITPHCALMDCLMYEAATVGNVKLPQLRAVLSKDLVFRTASPRVVL"
XX
SQ Sequence 3377 BP; 895 A; 803 C; 727 G; 952 T; 0 other;
ab586644 Length: 3377 27-JAN-2012 Type: N Check: 4644 ..
1 cgcaccgggg atcctaggca tttttggacg cgctttgcaa accactcatt
51 tgatagtggg gtgccaataa aaatgggaca aataatcacc ttctttcagg
101 aggtgccaca catcatagaa gaagtgatga acatagtcct catcactctg
151 tcccttcttg caatactcaa aggaatttac aacctggcaa catgtggact
201 gttaggtttg atttcatttt tatttctctg tgggaggtca tgcacaatgg
251 tatacaagga caactatgct ctgaacagtg tggagctcga catgtccact
301 ttgaattata caatgccgtt gtcctgttct aagaacaaca cccatcatta
351 cattcagacc tacaatgatt ccggcttgga gcttacattg acaaacaatt
401 ccattttgag tcataagttc tgcaatctct ctgatgcaca caaaaggaac
451 ctgtatgatc acacccttat gtccatagta acaactttcc acctaagcat
501 tccaaacttc aatcagtatg agtctatggc ctgtgacttt aatggcggga
551 agataactgt tcagtacaat ttaagtcact catcaccaac tgatgcagca
601 aaccactgtg gtacagttgc aaatggtgtc ctagacacat tcagaaggat
651 gcattgggga ccagcacatt ttcccaaccc ccccttcacc attggagggg
701 tttcgtgcat ccagacaagc tatcagtacc tcatcattca gaacacaaca
751 tgggaagatc attgccaaat gtcaaggccc acacccatgg gctacttatc
801 actgatagca cagagaacaa gacaactata catttcaaga agactaatgg
851 ggacctttac ctggaccttg tctgattctg ccgggaatga tctgcctgga
901 ggttactgcc tacagaggtg gatgttgatt gaggctgaga tgaagtgttt
951 tggcaacact gctgtagcta aatgcaatca acagcatgat gaggagtttt
1001 gtgatatgct gagactgttc gatttcaaca aagaagcaat tagaagactg
1051 aaagttgagg cagagagaag catcaacctt atcaacaaag cagtgaattc
1101 ccttattaat gatcagctga taataagaaa ccacctgagg gatctaatgg
1151 gtatacctta ctgcaactac tcaaagttct ggtacctaaa tgacacaagg
1201 aacggaaaga catctctgcc aaaatgttgg aaagtttcga acaactctta
1251 ccttaatgaa acccactttt caaatgaaat tgaggaggag gccaacaata
1301 tgataacaga aatgctcaga aaggagtatg agaagagaca gagtacaact
1351 ccccttggtt tggtggacct ctttgtattc tcaacctctt tctacttaat
1401 tagtgtgttt cttcacctaa taaagatccc tacacacaga cacattgttg
1451 gcaagggctg ccccaaaccc cacagattga atcacatggc ggtttgtagc
1501 tgtggtgttt ttggccaacc aggacttcct gtgagatgga agagatgagg
1551 acccaggggg cccccgtgac ccaccgcctt atggcggtgg gtcacggggg
1601 cgtccccttt acaggacgac tctcggtgat gctgttctga acactagatc
1651 cttagaaagc acagccctta gttgtggaag tttcacgttc ccaactgttg
1701 cggcttcata catcaagcaa tccattaggg cacaatgtgg agttatctcc
1751 tctttcccac ctctcttctt cttttcaact acaatcccag tgtgcatttt
1801 gcacaagggc ttgtagtggt cccaaatttc gtcttcgaat ttcctggctt
1851 caggctttgt catcccaaca tcaatcagct tgatgtccct tcttccctga
1901 gactccaaga gcttcctgat gtcatctgcc ccctgacagg tgagaaccat
1951 gttcttaggt agactctcta acacagcgct agtaagtcca ggctgaacat
2001 tgaaaaggtc ttgaatgtcc agaccatgag aatgtttgga atcctgttta
2051 aactgtttta aatctgtcgg ttcacgatag aaatggatat aatgtccatt
2101 tgcgggttga agaatggcta tctcaacagg gtcctcagcc ctcccttcaa
2151 tgtcaatcca agttttggca tttgggtcca gctgcagcat agaatccttt
2201 agctccatga cttgagaata ggtcagtgca gtggggaagc cctgtgcctg
2251 tgctagcctg gtgccaccag gcaaggcggg tttgctctcc ggcgggctgt
2301 tccctcccaa gtcaacagct gtgttgtccc aggctctccc caggatagag
2351 gttcttgagg cgatgtaggg ccagccatca cctgaaagac acaatttgta
2401 caagaggttt tcatatggat tcctatctcc tggtgcttca gatatgaaca
2451 ttccaagtga ccttttaacc ttcaacacag ctttcagaat gtcctggata
2501 ttcttggggc tgactctgat ggtttcaagc atattccccc cgtctagtaa
2551 acttgcacct gccttgacag ctgcactcaa gctgaagttg tacccagaga
2601 tgttgatggc gcttctatta acatctatca aattgagaac aggatgagtt
2651 tgagctaatt tgtccagatc tgatgtattt gggtactttg ctgtatacac
2701 taaccctaaa tcactaaggg actggatgac atcgtttaag tcaacctgac
2751 cctgtttgca catgcatgca acagtcaagc ttggcatggt gccgaactga
2801 ttattgagta gttccgggtt tctcacatcc cacactctca ctatgccatc
2851 acccctcact gctggatttg ggcctctctg ccccatgccg atcatctgga
2901 ggagggcctt cctttggtcc agctgttgag ctgttagatt ccccatgtag
2951 attccggctg ttaagggcct ttcagatcta gtgatttttg atttgagttt
3001 ttcaagatct gcagcaagta tcagaaggtc atccgatgat aatgtcccca
3051 cacgtaggac attcttctgt tgtgaagact tgagctcaac aagattgtta
3101 actgcttggt ttaagtccct cagcctcttg agatctgagt cgtctctctt
3151 ttcctttctc atcagtcttt ggacattgct aacctctgag aagtctaggc
3201 catgtaagag tgcttgcgca tctttaatga cctgcacttt gacatttgaa
3251 caaaatcctg acagttccct tctaagggac tgggtccaca aaaaggactt
3301 gacttcttta gaattgctca tgtttcggaa tagttttcca atatgcgcaa
3351 ccaaagtagc ctaggatcca ctgtgcg