Sequence of DPV Tomato leaf curl New Delhi virus
Tomato leaf curl New Delhi virus DNA, segment B, complete sequence, host: Cucumis sativus.
ACC No: AB613826
Dated: 2011-10-18 | Length: 2690 | CRC: 1126922820
ID AB613826; SV 1; circular; genomic DNA; STD; VRL; 2690 BP.
XX
AC AB613826;
XX
DT 04-OCT-2011 (Rel. 110, Created)
DT 18-OCT-2011 (Rel. 110, Last updated, Version 2)
XX
DE Tomato leaf curl New Delhi virus DNA, segment B, complete sequence, host:
DE Cucumis sativus.
XX
KW .
XX
OS Tomato leaf curl New Delhi virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2690
RA Mizutani T., Daryono B.S., Natsuaki K.T., Ikegami M.;
RT ;
RL Submitted (09-FEB-2011) to the INSDC.
RL Contact:Tadasuke Mizutani Tokyo University of Agriculture, Graduate School
RL of Agriculture, Department of International Agricultural Development,
RL Laboratory of Tropical Plant Protection; Sakuragaoka, 1-1-1, Setagaya,
RL Tokyo 156-8502, Japan
XX
RN [2]
RC DOI:10.1094/PDIS-03-11-0196
RA Mizutani T., Daryono B.S., Ikegami M., Natsuaki K.T.;
RT "First Report of Tomato leaf curl New Delhi virus Infecting Cucumber in
RT Central Java, Indonesia";
RL Plant Dis. 95:1485-1485(2011).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2690
FT /organism="Tomato leaf curl New Delhi virus"
FT /segment="B"
FT /host="Cucumis sativus"
FT /strain="ToLCNDV-Indonesia"
FT /isolate="[Indonesia:Java:Cucumber:2008]"
FT /mol_type="genomic DNA"
FT /country="Indonesia:Central Java, Klaten"
FT /collection_date="Aug-2008"
FT /db_xref="taxon:223347"
FT CDS 442. .1248
FT /codon_start=1
FT /transl_table=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="BAL03050.1"
FT /translation="MAFASPYSIPRRSGFPCNRTYNGTKSFRLWKCRKYQNWKPNRIIH
FT VKSLPPTQLFGDSISKQYTRKEICETQEGSEYVLHNNRYMTSYVSYPAKTRTGTNNRVR
FT SYIKLKSLTLSGTIAVRKSDVMTEALQTTGIYGVMSVVVVRDKSPKIYSATQPLIPFVE
FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNCIKKFCIRNCISRTYTTWVTF
FT KDEEEDSCSGLYSNTLRNAIILYYVWLSDVPSQVDLYSNVILNYIG"
FT CDS complement(1305. .2150)
FT /codon_start=1
FT /transl_table=1
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="BAL03051.1"
FT /translation="MSTGNEGVGMGVGGYIHSERVEYALTNDAAEVTLSFPSMFEQKIS
FT QLRNRCMKIDHVVLEYRSQVPINAVGPVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY
FT YSSSFFSVKDKNPWKVEYRVENANVVNGVHFCKMMGKLKLSSAKHSTDVEFRPPKIEIQ
FT TKEFTVNDIDFWSVGSKPQTRRLVDGSKLTGHSSRSLRVPYLTIGPNESWASRSEIGIS
FT SVTSRPYKNLSGLDDSAIDPGPSASQTGSITREEIADIITKTVEQCIKSNVNAPISKGV
FT "
XX
SQ Sequence 2690 BP; 758 A; 583 C; 516 G; 833 T; 0 other;
ab613826 Length: 2690 18-OCT-2011 Type: N Check: 9536 ..
1 accgaatggc cgcgaaaatt tttcccccct atcttgcccg ttgatgcgta
51 aatatttcac gccagtagta gtccgatttg caacacgtgt attccactaa
101 cagactttat gcaaataaat gtctaaaatg cgtctcttta agtcgtttgt
151 ggtcccaata tgcttttttc gtacgtctat tatgtgtgta tgtggtcccc
201 ccgcactatt taaagtcttt gacatgaatc aaattacctt atttgctata
251 tgtattttga taggtcgaga tcaaaatgaa tatgtttcga aaatggcagt
301 cgtccgatcg tattagatat gctttaattc aaacaacaca tgtttttatt
351 ttatccactg actaaaatac taaattataa aactgctaca tatatggcat
401 taaatggttt atcgttgcga cacatatccc atctcagcta aatggctttt
451 gcttctcctt attccatacc tcgccgttcg ggtttccctt gcaacagaac
501 atacaacgga accaagagtt tccgcttgtg gaaatgtcgg aagtatcaaa
551 actggaagcc caatcgcatt atccatgtca aatcactccc tccaacccaa
601 ctgtttggag attcaatttc caaacaatat acacgtaagg aaatctgtga
651 aacacaggag gggtctgagt atgttctcca caacaatcgt tacatgacat
701 catatgtctc ttatcctgcg aagaccagaa cgggaacgaa caatcgcgtt
751 cgttcctata tcaagttgaa gagtttgact ttatcaggga ccattgccgt
801 tcgaaagtcg gatgtcatga cggaagctct ccaaacaacc ggaatttatg
851 gggtgatgtc tgtcgttgta gttcgcgata aatcgccaaa gatttattct
901 gcgacgcaac ccttgatacc gtttgtggaa ctatttggat ctgtgaatgc
951 atgcagggga agtctgaaag tggcagaacg ccaccatgaa cgatttgtac
1001 tgctgaatca aacatctatt gtcgtcaata ccccacattc gaattgtatc
1051 aagaaattct gcattcgtaa ctgcatctcg agaacttaca caacctgggt
1101 aacgttcaaa gacgaagaag aagatagctg tagtggacta tattcaaaca
1151 ctctacgaaa tgcaattatt ttatattacg tgtggttaag cgatgtaccc
1201 tcacaggtcg atctatatag caatgtaatt cttaattaca ttggatgatg
1251 tgttaaaatc cagcagaaac aatttattca taaataatag ttgcttaaaa
1301 atttttacac gccctttgat attggagcat ttacattaga ttttatacat
1351 tgctcaacag tcttcgtaat tatgtccgca atttcttccc tcgttatact
1401 ccctgtttgt gaggccgatg gacctggatc gattgccgaa tcgtccagtc
1451 cactcagatt tttgtatggt ctactggtga cggacgaaat gccgatctct
1501 gatctgcttg cccatgactc gttcggacct atcgtcagat atggtacgcg
1551 taacgatctt gaactatgtc ccgttaactt agaaccatcg acaagacgcc
1601 ttgtctgcgg tttggaaccc actgaccaga aatcaatgtc attaacagtg
1651 aattccttgg tttgtatttc tatctttggt ggtctgaatt cgacgtcagt
1701 cgaatgtttt gccgacgaca gcttgagttt tcccatcatt ttacagaagt
1751 gtactccatt tacgacgttt gcgttctcca cccggtattc cactttccaa
1801 ggattcttat ccttgacaga gaagaatgaa gaagagtagt agtgcaggtt
1851 gcagttgcat ttgatcggaa ttgtgaattc cgcttgtttt gtgtctccct
1901 ctgtcaatct catgtcgtgt atctctatca cgacaggacc aacagcatta
1951 atgggcacct gactgcgata ttccagtact acgtgatcta ttttcatgca
2001 tctattcctc aactggctta tcttctgctc gaacattgaa ggaaacgaca
2051 aggtgacttc tgcagcatca tttgtgagcg catactcaac acgctctgag
2101 tgaatatacc cacctactcc catgcccact ccttcatttc ctgttgacat
2151 attggtcgcg cagcggagaa cctcgagaaa cacagaagaa cggactacga
2201 atgtagaaac ctcaatgatg aagaaacgct agcaaacaac gacgtttttt
2251 tgcaaaggat gaatgtatat gcatttataa tcttttccat ctcatgtgta
2301 tgttatccta aataccctca aacgaacgga acatatttgt cgaacaaaaa
2351 ggaattgtgg ctagctgtta tccaatcgat atatttcaat gataaattgg
2401 aagcagagtt tcttttaatt gggtattgct attaaatgaa aagcccattt
2451 aaccggccca gcatcgtagt ccatctttaa aaccacagcg cgtggtttta
2501 tgttgttacc cgaagttaga gagaagcagg cgtttctctc tctagacacc
2551 atattggcgt ccctcaactt tgtctatgta attggcgtct ggcgtcccat
2601 atataggtag gacgctaaat ggcatgattg taattttgga aagaaaatta
2651 ctttaattca aattcctcat tgcggccatt cgttaatatt