Sequence of DPV Tomato blistering mosaic virus
Tomato blistering mosaic virus gene for coat protein, complete cds.
ACC No: AB627084
Dated: 2012-11-22 | Length: 1782 | CRC: 1332875329
ID AB627084; SV 1; linear; genomic RNA; STD; VRL; 1782 BP.
XX
AC AB627084;
XX
DT 26-OCT-2011 (Rel. 110, Created)
DT 22-NOV-2012 (Rel. 114, Last updated, Version 2)
XX
DE Tomato blistering mosaic virus gene for coat protein, complete cds.
XX
KW .
XX
OS Tomato blistering mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC Tymoviridae; Tymovirus; unclassified Tymovirus.
XX
RN [1]
RP 1-1782
RA Oliveira V.C., Guimaraes F.C., Kitajima E.W., Resende R.O.,
RA Inoue-Nagata A.K., Nagata T.;
RT ;
RL Submitted (24-APR-2011) to the INSDC.
RL Contact:Tatsuya Nagata Universidade de Brasilia, Departamento de Biologia
RL Celular; Campus Darcy Ribeiro, Asa Norte, Brasilia, DF 70910-900, Brazil
XX
RN [2]
RC Publication Status: Available-Online prior to print
RC DOI:10.1007/s11262-012-0830-x
RA de Oliveira V.C., Nagata T., Guimaraes F.C., Ferreira F.A., Kitajima E.W.,
RA Nicolini C., de Oliveira Resende R., Inoue-Nagata A.K.;
RT "Characterization of a novel tymovirus on tomato plants in Brazil";
RL Virus Genes 0:0-0(2012).
XX
DR RFAM; RF00233; Tymo_tRNA-like.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1782
FT /organism="Tomato blistering mosaic virus"
FT /host="Solanum lycopersicum"
FT /mol_type="genomic RNA"
FT /country="Brazil:Santa Catarina State"
FT /collection_date="09-Mar-2010"
FT /db_xref="taxon:1010616"
FT CDS 1088. .1660
FT /codon_start=1
FT /transl_table=1
FT /product="coat protein"
FT /protein_id="BAL04726.1"
FT /translation="MDPSTSNTINSKQPSIQAPGYHLPTPTTELSGAIELPFQFMATTF
FT GSAETLAQITLSSSAPLTKMMSSYRHCKLTQCSAELTPNAGAIANPLTVNLVWVPANST
FT ASPPDILNVYGGSSFVLGGAITAAKTISVPLPANSVNLMLKDSVLYSDTPKLLAYSPAP
FT TTPSKTPTATLQIRGRILLSSPLLQSS"
XX
SQ Sequence 1782 BP; 406 A; 586 C; 291 G; 499 T; 0 other;
ab627084 Length: 1782 22-NOV-2012 Type: N Check: 12 ..
1 tggtctgatc cggactggcg ttacacaacc gtcaaaatct ttgccaaagc
51 tcaacacaag gtcaatgacg gctccatttt tgggtcatgg aaagcttgcc
101 aaactctggc cctcatgcat gattacatca tcttaatcct tggtccagtc
151 aagaagtatc aacggatcat agatgccaga gatcgccctc ctcaaattta
201 catccactgc gggcacactc ctcagcaact atcctcttgg tcccaatctc
251 atctgaaagg ctctgttttc cttgccaatg actacacatc ttttgaccaa
301 tcccagcatg gagaagctgt agttttagaa ttgctgaaaa tgcaacgcct
351 ttcttttcct cctttcttcc tctctctcca tcttcatctc aagacttcca
401 ttgagacgca gttcggccct ctgacttgca tgcgcctcac aggtgagcca
451 ggcacctacg atgacaactc cgactacaat ctggctgtca tttattcgaa
501 atactcgatc tccaatcatc ccatcatgat ttctggggat gattccgtaa
551 tctgtggttc tcctcctctc aatcctcagt ggcccaatct ccagaaactg
601 ctccacctca agttcaaaac tgagcagtca gaccggcctc tcttctgtgg
651 ctattatgtc tcccccctcg gagcatgtcg caatcctctg gccctcttcg
701 ccaagctcat gatttgcgtc gacgacctaa ccttgccaga caaggtcctt
751 tcttatttgt ctgaattctc agtcggccac gctttaggtg actcagtcac
801 tgaagtcatc ccatcgcacc tcatctccta ttactccgct tgtcatgact
851 tcttctgtcg caactgctca ccttcccaaa agctcatgct gagccttgat
901 ccaatcccag agtccaagct catcaagtta atcctcaaag ttcgctgggc
951 ttcaaaaagt ttcttttcca tgctcccaca aaaggccaga gacatccttg
1001 tttccactca ttctttccaa tccatgcctt ttgatcctaa agtttcccaa
1051 ctagagtcgg aattgcttcc caattacaat tgacacgatg gatcccagta
1101 cttcaaacac catcaattcg aagcaacctt ccattcaggc tcctggttac
1151 catctcccca cccccaccac tgaactctcc ggagccattg aactcccttt
1201 tcagtttatg gccaccactt ttggctccgc cgaaacacta gcccagataa
1251 ctctatcttc ctcagctcca ctcaccaaaa tgatgtcttc ttaccgacac
1301 tgtaaactga cgcagtgctc tgctgaactc acccctaacg ctggtgctat
1351 cgcaaacccc ctcaccgtga atcttgtttg ggtccctgcc aattctactg
1401 catcccctcc tgacatcttg aatgtctatg gggggtcttc cttcgtactt
1451 ggtggcgcca ttactgctgc caaaacaatc tctgtccccc ttcctgctaa
1501 ctctgtcaac ctcatgctca aagacagcgt cctctattct gacaccccca
1551 aactcttggc gtattctccc gcgccaacca ctccctccaa aactcccaca
1601 gccacccttc aaattcgtgg ccgtattctt ctctcctctc ctcttcttca
1651 atcctcctag catcctcctc catcctgtcg gttcaggtaa aaaaatcatg
1701 taattgagcg caggctctcc ctatagcaca cataggtcaa accgggtgca
1751 actccccccc ttttccgagg gtatcggaac cc