Sequence of DPV Luka virus
Lunk virus NKS-1 RNA, segment L, complete sequence.
ACC No: AB693151
Dated: 2012-10-07 | Length: 7195 | CRC: -295852017
ID AB693151; SV 1; linear; genomic RNA; STD; VRL; 7195 BP.
XX
AC AB693151;
XX
DT 30-SEP-2012 (Rel. 114, Created)
DT 07-OCT-2012 (Rel. 114, Last updated, Version 2)
XX
DE Lunk virus NKS-1 RNA, segment L, complete sequence.
XX
KW .
XX
OS Lunk virus NKS-1
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses; unclassified Old world arenaviruses.
XX
RN [1]
RP 1-7195
RA Ishii A., Sawa H.;
RT ;
RL Submitted (18-JAN-2012) to the INSDC.
RL Contact:Akihiro Ishii Research Center for Zoonosis Control, Hokkaido
RL University; kita-ku, N20, W10, Sapporo, Hokkaido 0010020, Japan
XX
RN [2]
RX DOI; 10.1099/vir.0.044099-0.
RX PUBMED; 22815269.
RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B.M.,
RA Takada A., Mweene A.S., Sawa H.;
RT "Molecular surveillance and phylogenetic analysis of Old World arenaviruses
RT in Zambia";
RL J. Gen. Virol. 93(Pt 10):2247-2251(2012).
XX
FH Key Location/Qualifiers
FH
FT source 1. .7195
FT /organism="Lunk virus NKS-1"
FT /segment="L"
FT /host="Mus minutoides"
FT /strain="NKS-1"
FT /mol_type="genomic RNA"
FT /country="Zambia:Lusaka"
FT /isolation_source="kidney of rodent specimen: CZC 10LR34"
FT /collection_date="10-Aug-2010"
FT /db_xref="taxon:1134579"
FT CDS 49. .330
FT /codon_start=1
FT /transl_table=1
FT /gene="Z"
FT /product="Z protein"
FT /protein_id="BAM45330.1"
FT /translation="MGQVKSRKDPKQGVSEVQRCDLIPNSADIGPAYCKSCWMKADGLT
FT LCYDHYLCRECLNLLLSVSDRCPICKHTLPTKLRVAATPSAPPPPYSL"
FT CDS complement(510. .6755)
FT /codon_start=1
FT /transl_table=1
FT /gene="L"
FT /product="L protein"
FT /protein_id="BAM45331.1"
FT /translation="MAGIILVPMVDGRCTYENSMMPDWVNHKFRDLLFRLLEFSNENER
FT IFEESEYMRLCESLKTSVDRRSGIDSMKVLRDDRSSHNDEIIRMCHTEINPSMSSEEVA
FT LGINQIYGEFRRDLLSGELKRNFRVSNPGQLISEFTHLYEGNLYKDDLKEICKLAVRSC
FT PLMRFINSSLKGSDKHRCRVSYVDNLLSMLNKVKSLKLLNTRRKQLLNLDVLMLSALIK
FT FEKTDPLRSKDSNYWLGCCHVSVNDRLVSHQSTKNDFLKVLRNRQKSGPFRGVPLSIIF
FT DNTLSGFISKVKKCLQLAGLNFMNYNLTENLSDECAIKFSDFFEFTRDNPPPTMHYEKV
FT DCYNYDSMVSLENAAFQKLSSISLAITNSMKTSSVVRLRQNESGAQRYKSVECKEVFYQ
FT DVKTDSGDFYLLYQKTGEVSRCYSIHDHSSHIASFYADPKRFFLPIFSHDVILEMLDIM
FT MSWLTPCSDLEGSIPSVHLALRTLVLLLLTNPSKRNQRQVQNLRYLTMALVSDFHHVEL
FT MDKLREDLITDAEKLVHQLMVYLVREVFLVEKKTLLTTRFKFMLNVSYLCHLITKETPD
FT RLTDQIKCFEKFFEPKKDFGFFVNPKEVITDEEKDLLYKQMVKFTSKDLKCQSKTPGIN
FT KKAFSLMVSSINNGTLVCKGEKKLDLLDPMMNSGCATALDLASNKSVVVNKTLNGERLL
FT EYDFNKLLVNSVSQITENFMRKGKLTLNAGDYEYKVSKAVSKLIISTSKGGGADKLETD
FT DLKPDHIFDGQEELEFFHEVKDRVESIMLNYGVRKQTEYSDTHSKERKGLHHLQDVLPG
FT EKAGLRKLILSEISYHLVEDFDPSCLSQDDLKYVCERTQTHNVLGKLYFTKEFKEQCTL
FT DDMAPNLCRRFFEDGEWFSCFKMILLQMNANTYSGKYRFNHRQQLNFKFDRCKLEEDAR
FT ISERESNSESLSKALSLSKCLSSALKNLCFYSEEAPTSYTSIGPDSGRLKFALSYKEQV
FT GGNRELYIGDMRTKMFTRLIEDYFESLTGFFSGSCLNDEKEFENAILSMTINVRQGFLS
FT YSMDHSKWGPMMCPFLFLMLLQNLKLSDEQYVRGGKDHISTLLAWHIHKMVEVPHNVVS
FT AMMRSYIKDKLKLLKGSHCTPTERLFRNYFEKGVVPSHITSLIDMGQGILHNASDFYGL
FT LSERFINYSISLLYGEAVDAYTSSDDQITLFDERISNLAEDDPEEVLILLEFHSHMSAL
FT LNKFVSPKSVVSRFAAEFKSRFYVWGEEVPLLTKFVSAALHNVKCKEPHQLCETIDTIL
FT DQAVANGVPVRLVNRIQSRTLSLLKYANCPIDPFMLNCQTDVKDWLDGSRGYRIQRLIE
FT TLCPSQTKVMRKLVRRLHHKLKNGELSEEFLVDLFNRDKPQVIEHLGKVLDLTEDLTGL
FT GDLCWLNLNEQFPMRMVLRQKVIYPSSMNFNEERLPSLVKTLQNKLSSKFTRGAQKLLA
FT EAINKSAFQSCISSGFIGLCKTLGSRCIRNKEKETLYIKKVVSELEKDARVSAELSKVH
FT DITLYKLNKGNTTVPCPAIDSTCFLRPILWDYICITLSNSFELGVWVIADPSPPPEDGF
FT MSSQMNLNDYVGRKPTGVRLLEDRVTLNHILQSVRRLFPKIYEDQLLPFMSDQSSKMMK
FT WSPRIKFLDLCVLIDIHSECLSLISHIVKYKRDEHYVVLTSDLARCHSREDTSLKDEFV
FT VSSSDVCRNFLKQVFFESFVREFVITSRTIGNFSWFPHKSMTPSDDGIELLGPFQTFVS
FT KVVNKGFERPMYRTDLQHGFGWFSYQFSDIICALAQLVQIGLTETHLFNGMTEFWNYVI
FT ENTSGILQLNFSVNFTHNQSGGSCLRKFSISFQIKCQVTDVGQSRMLDCTYYFQGDVDR
FT RLLDECLCLLRTDMMFKGNNVRLDLRSDEFQEYVKDPLSLGCIVELVITNSDAILKDVT
FT SDDFQRVGPEWEPVPLSIKNGNLYEGCMLVQPLSLALGNKDFLIFLVETEGHPTQSVSL
FT AALFKHRFKTGEHLMDVDIQLVLRDAQIAKHTLIDPLKEVTDWFRFRDTSLCYSKAKET
FT IMYETSIGRFRLKGKSCDDWLVEAVQEEIE"
XX
SQ Sequence 7195 BP; 2023 A; 1701 C; 1333 G; 2138 T; 0 other;
ab693151 Length: 7195 07-OCT-2012 Type: N Check: 8721 ..
1 cgcaccgggg atcctaggct ttttggtttg cgctttgaac cagttgctat
51 ggggcaggtg aaatcacgga aagaccccaa gcagggagtg agtgaagttc
101 agcgttgtga cctgattccc aattccgcag acattggtcc tgcttattgc
151 aagtcatgct ggatgaaggc agatggtctt acactgtgtt atgaccatta
201 cctctgcaga gaatgtctaa atctccttct ctctgtgtct gaccgctgcc
251 ctatctgcaa gcacactctg ccaacaaaac tcagagtggc agccaccccc
301 tccgctccgc caccaccata cagcctctga gaagacacac acaggcccga
351 gcagagccac gccccaagag gcacacaaac acacagacac acacaaacaa
401 acgacacacc acacagacac acacacacac acacaccccc agcagggggg
451 ccccccacgg ggggcccccc cagggggcgt gctccccgcc cgcccagcgc
501 aggggtccgt cactctattt cctcctgcac tgcctccacc agccagtcat
551 cacaggactt tcccttcaat ctaaatctcc ctatagatgt ttcatacatt
601 attgtctctt tggccttgct gtagcataaa ctggtgtccc taaaacggaa
651 ccagtcagtc acctctttca gagggtctat gagggtgtgt tttgctattt
701 gggcgtctct cagaactagc tgaatgtcta catccataag atgttctcct
751 gttttaaatc tatgtttaaa aagtgccgcc agagacacag actgtgtggg
801 gtgcccttca gtttctacaa ggaagatgag aaagtcttta ttccccagtg
851 caaggctcaa gggttgcacc agcatgcaac cctcatacaa gttcccgttt
901 ttgatggata gaggaacagg ctcccattca ggacccactc tttggaagtc
951 atcagatgta acatccttta ggattgcatc agaattagta ataacgagct
1001 ccacaataca ccccaaagac agaggatctt tcacatactc ctggaactca
1051 tcagacctta agtccaacct cacattgttc cctttgaaca tcatatctgt
1101 tctcagaaga cacaagcact catcaagcag tcttctgtcc acatctcctt
1151 ggaaatagta agtgcaatct aacattctag actgtcccac atctgttact
1201 tggcacttaa tttgaaacga tatagaaaac ttccttaagc aactccctcc
1251 actttgattg tgcgtgaagt tgactgaaaa attgagttga agaattccac
1301 ttgtgttttc tatgacatag ttccaaaact ctgtcatacc attgaataag
1351 tgtgtctctg tgagtcctat ctgtaccagt tgggcaagag cacagatgat
1401 atcactaaat tgataagaaa accacccaaa gccatgttgt aaatctgttc
1451 tgtacattgg tctctcaaaa cccttattca caactttgct gacaaacgtc
1501 tggaaaggtc ccagcaactc aattccatca tctgaggggg tcatactctt
1551 atgagggaac catgaaaaat tgccgattgt ccttgatgta attacaaact
1601 ctctcacaaa agactcaaaa aacacttgct ttaagaagtt cctgcaaaca
1651 tcactactac tcaccacaaa ttcatccttt aaggatgtgt cttctctaga
1701 atggcacctt gctaaatccg aggttagaac aacataatgt tcatccctct
1751 tgtatttgac aatatgtgaa attagagaaa gacattccga gtggatgtct
1801 attagcacac agaggtccaa aaactttatc cttgggctcc atttcatcat
1851 tttggaactt tgatcagaca taaatggcaa cagctggtct tcatagattt
1901 taggaaacaa tctccgaact gactgaagga tatggttgag tgttacccta
1951 tcttctaata acctaactcc tgtgggtttc ctaccaacat agtcatttaa
2001 gttcatctgg ctagacataa acccatcctc aggaggtggt gaggggtctg
2051 caatgaccca gacaccaagc tcaaaagaat tgctcagtgt gatacagata
2101 taatcccaca aaatgggtct caagaagcat gttgaatcaa ttgctgggca
2151 gggtactgtg gtgtttcctt tatttagttt gtatagtgtg atatcatgaa
2201 ccttgctcag ctccgctgac actctggcgt ctttttccaa ctcagaaaca
2251 accttcttta tgtacagtgt ttctttctct ttgtttctga tgcaacggct
2301 acctagagtc ttacagagtc caataaaccc tgatgatata caactttgga
2351 aagcagactt attgattgcc tctgccaata gcttctgagc acccctcgta
2401 aatttggaac tcagtttgtt ctgaagtgtc tttaccaacg atggtagcct
2451 ttcctcatta aagttcatgc tggatggata tatgactttt tgtctcaaca
2501 ccatcctcat tggaaactgt tcgttgagat tgagccagca gagatctccc
2551 aatcctgtca agtcttcagt gaggtccaat accttgccca ggtgctctat
2601 aacttgtggt ttatcacgat tgaataaatc caccagaaat tcttcactaa
2651 gctcaccatt ctttaatttg tgatggagtc ttctgaccag ctttctcatg
2701 acctttgttt gggaaggaca caatgtctca atcaaccttt gaattctgta
2751 tcccctggaa ccatctagcc aatccttaac atcagtctga caatttagca
2801 taaatggatc gattgggcag tttgcatact ttaacagtga caacgtgcgg
2851 ctttgtatgc gatttaccag ccttacaggt acaccgtttg ctacagcctg
2901 gtctagtatt gtgtctattg tctcacaaag ttggtgtggc tctttgcact
2951 tcacattgtg cagtgcagca gaaacaaact tggtcaacaa aggcacttcc
3001 tcaccccaaa cataaaacct agatttaaat tctgcagcaa aacgactcac
3051 cacactcttt ggactcacaa atttgttcaa taaagcactc atgtggctgt
3101 ggaattcgag cagaattaag acttcctctg ggtcatcttc tgccaaatta
3151 ctgattcgct catcaaaaag ggttatctgg tcatcactag atgtgtaggc
3201 atcaacagct tctccatata gaagggatat actgtagtta ataaatctct
3251 cactcagaag gccataaaag tctgaggcat tatgtaggat gccttgaccc
3301 atatcaatca aactggtgat gtgggaagga acaactccct tctcaaagta
3351 gtttctaaat aacctctcag ttggtgtaca atgagagcct ttcagtaatt
3401 tcagcttgtc ttttatgtat gatctcatca tggcactcac cacattatga
3451 ggaacttcca ccattttgtg aatatgccag gctaaaagcg tgctgatgtg
3501 gtccttcccc cctctcacat attgctcatc actcaacttt aaattctgca
3551 gtaacatcaa aaataggaaa ggacacatca ttggacccca cttgctgtga
3601 tccatactat agctaagaaa cccctgcctg acatttattg tcatgctcaa
3651 tattgcattt tcaaactctt tctcatcatt gaggcatgat ccggaaaaaa
3701 acccagttaa tgactcaaaa taatcctcaa taagccgtgt aaacattttg
3751 gttctcatat ctcctatgta aagttccctg ttacccccaa cctgttcttt
3801 ataagagagg gcaaatttca acctaccaga gtcagggcct attgaggtat
3851 atgatgtcgg tgcctcttca gaataaaaac ataagttctt taacgcagag
3901 ctaagacact tacttaatga caaagctttg cttaaggact cagagttgct
3951 ttctctctca ctgatccttg catcttcctc caatttgcat ctgtcgaatt
4001 taaaattcaa ttgttgccga tgattgaacc tgtatttccc tgagtaggtg
4051 ttggcattca tttgaaggag gatcatcttg aagcaagaaa accattcacc
4101 atcctcaaaa aaccttctac aaagattggg agccatatca tctagggtgc
4151 attgttcctt gaattccttt gtgaaataaa gcttacccag gacattatgg
4201 gtctgcgttc tttcacacac atacttcaaa tcatcttgtg ataagcatga
4251 agggtcaaaa tcttcaacca agtgatatga aatttctgag agtatgagct
4301 ttctcaaccc agccttctcc cctggcaaga catcctgtag atggtgtaat
4351 cccttccttt cctttgagtg agtgtcagag tactctgttt gttttctcac
4401 accgtaattc agcataattg actcaaccct gtctttgact tcatggaaga
4451 actcaagctc ttcctgccca tcaaaaatgt gatctggctt gaggtcatca
4501 gtctccagct tgtcagcacc tcccccttta gaagttgaga tgatcagctt
4551 tgagactgct tttgaaactt tatactcata atcacctgca tttaatgtca
4601 attttccttt cctcatgaag ttttctgtta tttggctaac tgagttaacg
4651 agtaacttgt taaagtcata ttccagtaag cgttcgccat taagagtttt
4701 gttgacaaca acacttttgt tgctcgccaa atctagtgcg gttgcacaac
4751 ctgagttcat catggggtct aaaagatcta actttttttc acctttacac
4801 accaatgtcc cgttgttgat ggaggagacc attaaactaa atgccttctt
4851 gtttattcct ggagtttttg actggcactt aagatcttta ctagtgaact
4901 taaccatttg cttatataac aggtctttct cctcatctgt gatgacctcc
4951 tttgggttca caaagaaccc aaagtctttc ttgggctcaa aaaacttctc
5001 aaaacattta atctgatctg tcaagcgatc gggggtctct tttgtgatta
5051 gatggcatag gtatgagaca ttcaacataa atttgaatct ggtagtcagc
5101 aatgtctttt tttcaacgag gaaaacttct ctgacaaggt agaccattaa
5151 ttggtgaacc aacttttctg catcagtgat cagatcctcc ctcaacttgt
5201 ccattagctc aacatggtgg aagtcagaca ctagggccat ggttaggtat
5251 ctaaggtttt ggacctgtct ttgattcctc tttgatgggt tggttaagag
5301 gaggagtaca agtgttctta gtgccaagtg aacacttggg atagatcctt
5351 ctaggtcaga gcagggggtt aaccatgaca tcatgatgtc taacatttct
5401 aaaatcacat catgtgaaaa gattggtaag aagaatctct ttggatcggc
5451 ataaaatgat gcaatgtggg aagagtgatc atgaatcgaa taacacctag
5501 agacttcccc agttttctgg tatagcaagt aaaaatcccc tgagtctgtc
5551 ttgacatcct gatagaagac ttccttgcac tcaacactct tgtatctttg
5601 ggcacctgat tcattctgtc taagcctcac aacagagctc gtcttcatgc
5651 tgtttgttat agccaaagat attgaggaca acttctggaa agcagcattc
5701 tccagtgaca ccattgagtc ataattatag cagtctacct tttcatagtg
5751 catagtgggg ggggggttat ctctagtaaa ctcaaagaag tctgagaact
5801 tgatggcaca ctcatctgac aagttctctg tgagattata gttcatgaaa
5851 tttaaacctg ccaattgcaa gcatttcttc accttgctga tgaatccaga
5901 cagagtattg tcaaagatga tacttaacgg gactccacgg aaaggcccag
5951 atttttgtct gtttctaaga accttgagaa aatcattttt tgtgctctga
6001 tggctaacaa gcctatcatt tacactaaca tggcaacacc ccagccagta
6051 attggagtct tttgacctca atgggtctgt cttctcaaat tttattaagg
6101 cagacaacat taagacatcc aggttgagta actgcttccg ccgtgtattc
6151 agaagcttca gacttttaac tttatttaac atggacaata agttatcaac
6201 ataggaaact ctacacctgt gtttatcaga tcctttcaga cttgagttaa
6251 taaatctcat taaagggcaa gatctaacag ccagtttgca tatttctttc
6301 aggtcatcct tataaagatt accttcataa aggtgagtga attctgatat
6351 caactggcca ggattgctaa ctctgaaatt ccttttcaat tcccctgaaa
6401 gcagatccct cctgaactca ccataaatct ggtttatgcc caaggcaacc
6451 tcctcacttg acattgatgg attgatctct gtatgacaca ttctgatgat
6501 ctcatcattg tgagatgacc tatcatccct gagcactttc atagagtcaa
6551 tacctgacct tctgtcaact gaggttttca aagactcaca tagcctcata
6601 tactcagact cttcaaagat cctctcattt tcatttgaaa actcaagaag
6651 cctgaacaat agatctctga acttgtggtt gacccaatca ggcatcatgg
6701 agttctcata tgtgcaccga ccatccacca ttggaaccaa gataatgcct
6751 gccattgcca aatcgtcttt gatgcttgaa agcttattag tgtcctctat
6801 gaattttgcc tcaaacccag ccggggaact cctcacaaag cattctaaca
6851 agattaaggt gttgtcaatc agtttataac catctggaat aatcaggggt
6901 aacccggggc agatgacacc agcctcaatc aagatggtct ccactgattt
6951 gtcttcatga ttgtgaacac agccattctt gtcagcactg tctatctcta
7001 tgcaccttga taacaacttc aacccttcta tcaaagtcag cttcggctct
7051 gactgactta agaagtttaa ttttgcctgg acagacgctc atcttgactc
7101 atgtaactta aacacagatg ccttatctct ccaataatgt cttccattcc
7151 agataccaaa aatgcgcatc aaaatagcct aggatcctcg gtgcg