Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus gene for coat protein, complete cds, strain: YJC.

ACC No: AB698449

Dated: 2012-02-15 | Length: 657 | CRC: -1442223640

                
ID   AB698449; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   AB698449;
XX
DT   15-FEB-2012 (Rel. 111, Created)
DT   15-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Cucumber mosaic virus gene for coat protein, complete cds, strain: YJC.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
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RN   [1]
RP   1-657
RA   Choi S., Choi G., Chung B., Cho J., Cho I., Kim S., Yoon J., Kim K.;
RT   ;
RL   Submitted (10-FEB-2012) to the INSDC.
RL   Contact:Seung-Kook Choi National Institute of Horticultural and Herbal Sc
RL   ience, RDA, Dept. Horticultural Environment; 540 Top-dong, Suwon 441440,
RL   South Korea
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RN   [2]
RA   Choi S., Choi G., Chung B., Yoon J., Kim S., Cho J., Cho I., Kim K.;
RT   "Characterization of Cucumber mosaic virus isolated from Petunia hybrida";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .657
FT                   /organism="Cucumber mosaic virus"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="YJC"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea:Icheon"
FT                   /isolation_source="Petunia hybrida"
FT                   /collected_by="Seung-Kook Choi"
FT                   /collection_date="03-May-2011"
FT                   /identified_by="Seung-Kook Choi"
FT                   /db_xref="taxon:12305"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /protein_id="BAL61194.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLRPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVLASSDLSVAAISAMFADGASPVLVYQYAASGVQTN
FT                   NKLLCDLSAMRADIGDMRKYAILVYSKDGALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 155 A; 171 C; 154 G; 177 T; 0 other;

ab698449 Length: 657  15-FEB-2012  Type: N  Check: 4764  ..

       1  atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc
      51  gcgtcgtggt tcccgctccg cctcctcctc cgcggatgct aactttagag
     101  tcttgtcgca gcagctttcg cgacttaata agacgttggc agctggtcgt
     151  ccaactatta accacccaac ctttgtaggg agtgaacgct gtagacctgg
     201  gtacacgttc acatctatta ccctaaggcc accaaaaata gaccgtgggt
     251  cttattacgg taaaaggttg ttactacctg attcagtcac ggaatatgat
     301  aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtga cagtccgtaa agttcttgcc tcctcggact
     401  tatccgttgc cgccatctct gctatgttcg cggacggagc ctcaccggta
     451  ctggtttatc aatatgccgc atctggagtc caaaccaaca ataaattgtt
     501  gtgtgatctt tcggcgatgc gcgctgatat aggtgacatg agaaagtacg
     551  ccatcctcgt gtattcaaaa gacggtgcgc tcgagacgga tgagctagta
     601  cttcatgttg acatcgagca ccaacgcatt cccacatctg gagtgctccc
     651  agtctga