Sequence of DPV Rice hoja blanca virus
Rice hoja blanca virus NCP (gv4) and pc4 (gc4) genes, complete cds.
ACC No: AF004657
Dated: 1997-09-11 | Length: 1984 | CRC: 1046067822
!!NA_SEQUENCE 1.0
ID AF004657 standard; RNA; VRL; 1984 BP.
XX
AC AF004657;
XX
SV AF004657.1
XX
DT 11-SEP-1997 (Rel. 52, Created)
DT 11-SEP-1997 (Rel. 52, Last updated, Version 1)
XX
DE Rice hoja blanca virus NCP (gv4) and pc4 (gc4) genes, complete cds.
XX
KW .
XX
OS rice hoja blanca virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-1984
RA de Miranda J.R., Ramirez B.C., Munoz M., Lozano I., Wu R., Haenni A.L.,
RA Espinoza A.M., Calvert L.A.;
RT ;
RL Submitted (16-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL Plant Biology, Noble Foundation, Sam Noble Parkway, Ardmore, OK 73401, USA
XX
DR SPTREMBL; O36302; O36302.
DR SPTREMBL; O36303; O36303.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1984
FT /chromosome="RNA-4"
FT /db_xref="taxon:12332"
FT /organism="rice hoja blanca virus"
FT /strain="Costa Rica"
FT CDS 40. .564
FT /codon_start=1
FT /db_xref="SPTREMBL:O36302"
FT /note="inclusion body protein"
FT /gene="gv4"
FT /product="NCP"
FT /protein_id="AAB69769.1"
FT /translation="MDFLKTDVSVGPIEGLNYRRLYDILPNKVSDNITLPDLKNPDKVT
FT EENKKLILCGFIYVAYHHPIETDPDFTSVHKHMPGISESFLEHLLGTDESNNTVDLGKL
FT FDILQERLGDWITMNFLKHNNRMSKDQIKTLCETIVDLAKAEGGDTEIYEAVWKKMPAY
FT YSILLQQILHK"
FT CDS complement(1097. .1948)
FT /codon_start=1
FT /db_xref="SPTREMBL:O36303"
FT /gene="gc4"
FT /product="pc4"
FT /protein_id="AAB69770.1"
FT /translation="MSISRYNPFKKSVILTDDLSERAAGKFEKKNKRKLALKNRPLTKG
FT RMTIDAAATVLGLEPFSFADVRANSYDMFVAKQDYSVCANRRTHFTIDSSPLFFRKPLQ
FT TFPFFRIATFAVIWLGIKGRANGTVTFRIIDRSYTDPERQVEVEICYPMAKTFAVLGSL
FT PNFMSYEDADKMQVEIVIKDDSVQNCIISRSLWFWGIERTDFPVPMESQKTVMFEFEPL
FT PDRTVNHLSKFKNFTTDVVQRAVTTAFTTREALEDKPGIEFGVVKQPGVPLVQKKRVMI
FT EA"
XX
SQ Sequence 1984 BP; 646 A; 429 C; 394 G; 515 T; 0 other;
AF004657 Length: 1984 December 21, 2001 14:43 Type: N Check: 9388 ..
1 cataaaacca taatctaaat attctgatag tatgcacaga tggacttcct
51 caagactgat gtgtccgtag ggcctattga aggattgaac tatagacgtt
101 tatatgacat actcccaaac aaggttagcg acaatataac tcttcctgac
151 ctcaagaacc cagacaaagt cactgaagaa aacaagaagc tgatcctatg
201 tggtttcatc tatgttgcgt accaccaccc tattgaaact gatccggact
251 tcacatctgt tcacaagcat atgcctggaa taagtgagtc attcctggaa
301 caccttctag gaaccgatga gtccaacaac actgttgacc ttggaaagct
351 ttttgacata ttacaagaga ggctgggtga ctggatcacc atgaatttct
401 tgaagcacaa caacaggatg tctaaggacc agatcaagac tctatgcgag
451 actatcgttg acttggcaaa agcagaagga ggtgacacag agatctatga
501 agctgtctgg aaaaagatgc cggcatatta ctcaatcctg cttcagcaaa
551 tactacacaa atgattatta tcggacaaat cctatgattt gaactaacca
601 gactaacagg atggagatga aagaaaagag agaaagaaaa aaagaaaaaa
651 agaaaaaaaa aaaaggaaag gaaaaggaaa agaaaaaata aggaaaaaca
701 aagtatcata aattctcata catcagcatc aagagaactg caactcactt
751 agttcataaa taatgcaacc cttgatgaag cgatgcatct gctacctata
801 tctcgacact gtccaacaac tgaaatcaaa tgcaaagaca caacagtgtg
851 aaaaagctta agaaaaccat aaagtagtca ctcaaagcat tgtctaaaac
901 taaaacctgg tgctgtgcac ctcatccgag taagtctccg gatagggtgc
951 ttagcaccct ttaaaattaa agacaaacat ctaacataca tgcatagcat
1001 gctgactact ccctttgttc taatagatgg ggacgaagac ttagtctttc
1051 atagcgtaca gatctagaca gaccaaacct taggtttttt tatgtctcag
1101 gcctcaatca ttaccctttt cttttgcacc agtgggacgc caggctgctt
1151 cactacacca aattcaatac caggtttgtc ttctagtgct tccctggtgg
1201 tgaaagcagt ggtaactgca cgctggacca catccgttgt gaagttcttg
1251 aacttgctca agtgattgac agtcctatca ggtaatggtt caaattcgaa
1301 cattacagtt ttctgggatt ccataggcac gggaaaatct gtcctctcaa
1351 ttccccagaa ccaaagggat ctagagatga tgcagttctg aactgaatca
1401 tctttgatca caatttctac ctgcatcttg tctgcgtctt cgtatgacat
1451 gaagtttggt agagagccaa gcactgcaaa tgtcttggcc ataggatagc
1501 aaatctccac ttcaacctgc ctctcaggat cagtgtaaga tctgtcaatt
1551 atcctgaaag tgacagtccc gttggctcta cctttgattc caagccatat
1601 gacagcaaaa gttgcaattc tgaagaacgg aaaggtttgc aagggctttc
1651 ggaagaagag aggggaagag tcaatggtga agtgagtcct cctattcgca
1701 caaacagaat aatcttgttt ggcaacaaac atgtcatagc tgtttgctct
1751 cacatcagca aagctaaacg gttccaatcc gagaacagtg gcagcagcat
1801 caatagtcat tctccctttg gtgagaggtc tgtttttaag agcaagcttc
1851 cgcttgttct tcttctcaaa cttcccagct gccctctcag ataagtcatc
1901 agtcaagatg acgcttttct tgaacggatt gtacctagat atcgacatgt
1951 ttgttcgcaa aatgtgattg ccctgacttt gtgt