Sequence of DPV Rice hoja blanca virus
Rice hoja blanca virus pv3 (gv3) and N-protein (gc3) genes, complete cds.
ACC No: AF004658
Dated: 1997-09-11 | Length: 2282 | CRC: 923741949
!!NA_SEQUENCE 1.0
ID AF004658 standard; RNA; VRL; 2282 BP.
XX
AC AF004658;
XX
SV AF004658.1
XX
DT 11-SEP-1997 (Rel. 52, Created)
DT 11-SEP-1997 (Rel. 52, Last updated, Version 1)
XX
DE Rice hoja blanca virus pv3 (gv3) and N-protein (gc3) genes, complete cds.
XX
KW .
XX
OS rice hoja blanca virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2282
RA de Miranda J.R., Ramirez B.C., Munoz M., Lozano I., Wu R., Haenni A.L.,
RA Espinoza A.M., Calvert L.A.;
RT ;
RL Submitted (16-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL Plant Biology, Noble Foundation, Sam Noble Parkway, Ardmore, OK 73401, USA
XX
DR SPTREMBL; O36304; O36304.
DR SPTREMBL; O36305; O36305.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2282
FT /chromosome="RNA-3"
FT /db_xref="taxon:12332"
FT /organism="rice hoja blanca virus"
FT /strain="Colombia"
FT CDS 96. .707
FT /codon_start=1
FT /db_xref="SPTREMBL:O36304"
FT /gene="gv3"
FT /product="pv3"
FT /protein_id="AAB69771.1"
FT /translation="MNVSLYYSGTPVSSHSLLSKNGLSNIVLTCKDLPIPTDLLSLFFD
FT ILNERDPSFDEHMFLQMIRKPDDPENLSVFLKSAIWMLSHKRDLPGHYRLPLTCLVSTY
FT SEYFVELKPRQPSTKCWFCKIAKDGLPFRVEGVHGFPSEAELYIVPSKEHAIESFEVLS
FT GKKLYRSPSKKKHGYLIASNKPPLTSKYVEYDPSKPDTKP"
FT CDS complement(1224. .2183)
FT /codon_start=1
FT /db_xref="SPTREMBL:O36305"
FT /note="nucleoprotein"
FT /gene="gc3"
FT /product="N-protein"
FT /protein_id="AAB69772.1"
FT /translation="MTMSVADVQTEIERVTTLALKYITDHKDTLVTFVGQIEYNGYDAG
FT KLLQILKRKAEGRDFGKDLCYLLVMRYTRGTGFVRDVRKKIKTAAGGDTAHEIVTHYGV
FT VQSVGDNADAITLGRLASLFPAVSMNIVRNVSTGAKLAVDSSDLGSSGLDLLLWDFVPQ
FT FITLVSLTAPYCTGKGMKTILFSLHVLHGARTTKKTMPDQKKKARSLLTDFELVKYTTE
FT LLVITCNAKNLKVEKKTIYRESLMRPFQEGAGDALGFKETFWTSLAKVSTGCVRKMKKD
FT AQAYLSERTPLLKVFVENCNKSEDEVAEAIKSYFVAEA"
XX
SQ Sequence 2282 BP; 661 A; 502 C; 414 G; 705 T; 0 other;
AF004658 Length: 2282 December 21, 2001 14:43 Type: N Check: 3930 ..
1 acacaaagtc ctgggtataa aaaaacaaac aaagatataa gaagagaaaa
51 actttagtga cttgatatct aattacaaga atcatatagt acaagatgaa
101 cgtgtccttg tactacagcg ggactcctgt ctctagtcat agcttgctca
151 gcaagaatgg tctgtcaaat attgttttga cttgtaagga tctacccata
201 cccactgatc tcttgtctct tttctttgat atcctcaatg aacgagaccc
251 aagcttcgat gaacacatgt ttttacaaat gattaggaag ccagatgatc
301 ctgagaattt gtctgttttc ttgaagagtg cgatatggat gctctctcac
351 aagagagatt tgccagggca ttacagactg cctctgactt gtttggtttc
401 aacatatagt gagtattttg ttgaactaaa gcctcggcag ccatcaacaa
451 aatgctggtt ttgtaagata gccaaggatg gattgccttt tagagtcgaa
501 ggtgtccatg gcttcccgtc agaagcagag ctatacattg tcccttcaaa
551 agagcatgca atcgagagct ttgaagtgct cagcgggaag aagttataca
601 gatctcctag caagaagaaa catggatatt tgatagcttc aaataagcca
651 ccactgactt ccaaatatgt cgagtatgac cccagcaaac ccgatactaa
701 accatgaatg cactcattac tgcttccatt ctaggcttgg tctactctcc
751 atggttgtga acctaacaga gccttcaact ctctgagatt ctctcatctc
801 gaacaaaaac aaataggcta agcctatttt ctcttaagaa tagtatctgt
851 gctaagcaca gcatccggat agtgtttcgg atggttttta cctaacctaa
901 tttttttgga tttttgttta ttttttgatt ttttgagtat ttacatattt
951 acaagatttt tcatggtttt ttcatttttt tagttttgtt ttccttgata
1001 cacactcaaa tagcaagtac atggttaatt tactttcaag gcatagcaca
1051 ctcaacacac ataataatga tatataggac aagatactaa tttaaacaac
1101 aatatagaat atagaactta aaagctaatg agattcatac atatgatgat
1151 ttacatattt acaaccaatc cgatttctca tcctttccag tttcatctac
1201 catctcaatc tgaactctcc attttatgcc tcggcgacaa agtagctttt
1251 gatcgcctca gcaacctcat cctcactctt gttgcagttc tccacaaata
1301 ctttcagtag aggagttctc tctgacaaat atgcttgtgc atcttttttc
1351 atctttctga cacaccctgt ggagaccttt gctagagagg tccagaaagt
1401 ctctttgaat ccaagagcat ctccagcgcc ttcttggaaa ggcctcatca
1451 aagactctct ataaattgtc ttcttctcta ccttgagatt cttggcatta
1501 caagtgatga ccaataattc agttgtatat ttcaccaact caaaatcagt
1551 cagaaggctt ctagccttct tcttctgatc aggcatggtc ttcttagtgg
1601 ttcgagcacc atgcaagaca tgcaaggaga agagaattgt cttcatgcct
1651 tttcctgtgc agtaaggggc agtcagagag accagagtga tgaactgagg
1701 gacaaagtcc cagaggagga ggtctaagcc tgatgaccct aaatctgaag
1751 agtcaaccgc tagcttggct ccagttgata cattcctaac tatgttcatt
1801 gacacagcag ggaacagtga cgcaagtctg cctagagtaa tagcatcagc
1851 attatctcca acagattgca caactccata atgtgtcact atctcatgtg
1901 cagtgtcacc tccagctgct gtcttgatct tctttctaac atctctgaca
1951 aacccagtac ccctggtgta tctcatcact aagagataac agagatcctt
2001 tccaaaatct ctcccttcag cttttctctt caagatctgg aggagcttgc
2051 ctgcatcata gccattgtac tctatctgac caacaaaagt cactagcgtg
2101 tctttgtgat cagttatgta cttgagggct agtgtagtga ccctctcaat
2151 ctcagtttga acatcagcaa ctgacatcgt cattgttgca accacagtta
2201 tgtcttcacg aatgggggca attgtaagat ttatcagaag tacgtttcag
2251 aaaccactct tgcttgatga tctttacaat gc