Sequence of DPV Thogoto virus

Thogoto virus segment 2 PB1 protein mRNA, complete cds.

ACC No: AF004985

Dated: 1998-07-13 | Length: 2212 | CRC: 2054262546

                !!NA_SEQUENCE 1.0
ID   TVAF4985   standard; RNA; VRL; 2212 BP.
XX
AC   AF004985;
XX
SV   AF004985.1
XX
DT   04-JUL-1997 (Rel. 52, Created)
DT   13-JUL-1998 (Rel. 56, Last updated, Version 2)
XX
DE   Thogoto virus segment 2 PB1 protein mRNA, complete cds.
XX
KW   .
XX
OS   Thogoto virus
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Thogotovirus.
XX
RN   [1]
RP   1-2212
RX   MEDLINE; 97426082.
RA   Leahy M.B., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   "The fourth genus in the Orthomyxoviridae: sequence analyses of two Thogoto
RT   virus polymerase proteins and comparison with influenza viruses";
RL   Virus Res. 50(2):215-224(1997).
XX
RN   [2]
RP   1-2212
RA   Leahy M.B., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   ;
RL   Submitted (21-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Virology and Environmental Microbiology, NERC, Mansfield Road,
RL   Oxford OX1 3SR, UK
XX
DR   SWISS-PROT; O41353; RRP1_THOGV.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2212
FT                   /chromosome="segment 2"
FT                   /db_xref="taxon:11569"
FT                   /organism="Thogoto virus"
FT   CDS             26. .2158
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:O41353"
FT                   /function="polymerase"
FT                   /product="PB1 protein"
FT                   /protein_id="AAC25959.1"
FT                   /translation="MNLFTPRSEINPTTTQELLYAYTGPAPVAYGTRTRAVLENIIRPY
FT                   QYFYKEPNVQRALDIKTGCKEPEDINVEGPSSGFHTASVLKLADNFFRKYRPAMEKLKY
FT                   WILVKLPKLKYAELSKGRQTYSFIHKRNLPAPIALEETVEFLEQNLRRKIGPTLLSYCQ
FT                   AIADVMELDETTYEGARDPRPWDIQLEEIDSDEEDPLFRQVGREETYTIKFSREELWDQ
FT                   MRTLNTMCKHLERGRLNRRTIATPSMLIRGFVKIVEDAAKEILENVPTSGVPVGGEEKL
FT                   AKLASKQTFHTAVTGELSGDQEKFNECLDPDAMRLMWTVFLRKLGCPDWIMELFNIPFM
FT                   VFKSKLADMGEGLVYTKGKLTDRKPLGEMPSEFDDLVRNVVGNSISCRLGMFMGMYNLT
FT                   STLLALISIEREELTGSHVESSDDFIHFFNCKTHEEMFKQAETLRLTLKLVGINMSPSK
FT                   CILISPAGIGEFNSKFHHRDFVGNVATELPALVPNGTNPMTDLAMGLNVIKHSVNTGQM
FT                   NLCTGALAMRIFNHAYKYAYMALGVTRRTRFMEENAITPLLTNQGASPVHSFSTMHLDE
FT                   VALRRHLGLLDEETLRRILNPNNPVTQKGDPSMFFRIENKMPQIMEDYSVPSCFKYTLS
FT                   RNRTIQDKPHKALLNKEERYQRVTSIINKLFPEVLIQEASAPGTVRESLKRRLELVVER
FT                   SDLDEERKKRILSRIF"
XX
SQ   Sequence 2212 BP; 708 A; 514 C; 532 G; 458 T; 0 other;

AF004985  Length: 2212  October 1, 2002 09:16  Type: N  Check: 3047  ..

       1  agcaaaaaca ggcgctccaa acacaatgaa cctgttcacc ccacgctcag
      51  agatcaatcc caccaccact caggagctac tatacgccta cacaggaccg
     101  gcgcccgttg cttatggcac aagaaccaga gcagtattag agaacataat
     151  cagaccttac caatacttct acaaagaacc caatgtccag agagctctag
     201  acatcaagac aggatgcaag gagccagaag atataaatgt ggaaggtcct
     251  agcagtggat ttcacaccgc aagtgtgtta aagctagctg acaatttctt
     301  tagaaaatac aggcctgcta tggaaaaatt gaagtactgg atacttgtaa
     351  agcttccgaa gctcaagtat gcagagctga gcaagggcag gcagacctac
     401  agttttatac acaaaaggaa cctcccagca cctatcgccc tagaagagac
     451  agtggagttc ttagaacaaa atctaagaag aaaaataggc ccaaccctcc
     501  tatcttactg ccaggcgatt gcagacgtga tggagctaga tgagaccact
     551  tatgaaggcg cgagagatcc caggccctgg gacatccagc tagaagagat
     601  cgactcagat gaagaagacc ctctgttcag acaagtaggt agggaagaga
     651  cctacaccat caagttcagc agagaagaac tatgggacca gatgagaacc
     701  ttgaatacta tgtgcaaaca cctagagaga gggaggttaa acagaaggac
     751  catagctacc cccagcatgt tgataagagg gtttgtaaaa attgtagagg
     801  atgcagccaa agagatcctc gagaatgtcc ctacctctgg agtgccagtg
     851  ggaggagaag aaaaattggc caagctcgcc agcaagcaaa cctttcacac
     901  agcagtcaca ggagagctga gcggcgatca agaaaagttc aatgagtgtt
     951  tggacccaga tgcaatgcgc ctcatgtgga ccgtgttctt gagaaagcta
    1001  gggtgccctg actggataat ggagttgttc aatataccat ttatggtatt
    1051  caagtcaaag ttagcagaca tgggagaagg attagtatac accaaaggga
    1101  aactcactga cagaaaacca ttgggagaaa tgccttcaga gtttgacgat
    1151  cttgtgagga atgtggtggg caacagcatt tcgtgcaggc tgggaatgtt
    1201  catgggaatg tacaacctca cgtcgactct gcttgcactg atctcaatag
    1251  agagagaaga gctcacagga tcgcacgtgg agagtagtga tgacttcatc
    1301  cacttcttca actgcaagac acatgaagag atgttcaaac aggcggagac
    1351  actccgactg actttgaaac tagttggcat caacatgtct ccttccaaat
    1401  gcatattgat cagccctgca gggataggag agttcaactc caaattccat
    1451  caccgtgact ttgtggggaa cgtggccacc gaactaccag cattggttcc
    1501  gaatgggaca aacccaatga cagacttggc aatgggccta aatgtgatca
    1551  agcattctgt caacaccggt caaatgaacc tatgcactgg agcattagcc
    1601  atgagaatct tcaaccatgc ctacaaatat gcatatatgg cattaggggt
    1651  aaccagaagg acccgattca tggaagaaaa tgcaatcacc cctctgctga
    1701  caaatcaggg ggcctcccca gtacacagct tctccaccat gcatctggac
    1751  gaagtggcac tcagacgcca tctgggcctt ctagacgaag agaccctgag
    1801  gagaatactg aacccgaaca acccagttac tcaaaagggg gacccttcca
    1851  tgttctttag aatagagaac aagatgcccc agatcatgga agactacagt
    1901  gtgcctagct gctttaaata caccttgtct cggaatagaa ccattcagga
    1951  caaaccccac aaggctttac taaacaaaga agagagatat caaagagtga
    2001  cctctatcat aaacaagctg ttccccgagg tgctcatcca agaggcatct
    2051  gctccaggca cggtcagaga gagccttaag agaaggcttg agctggtggt
    2101  ggagaggtct gacctggacg aggagaggaa gaagaggatc ctttccagga
    2151  tcttctgaat gggcacatca ctacactagt tttcttttgt aaaaaagcgc
    2201  cttgatttct ct