Sequence of DPV Thogoto virus

Thogoto virus segment 3 PA polymerase subunit mRNA, complete cds.

ACC No: AF006073

Dated: 2000-03-03 | Length: 1927 | CRC: 1861819701

                !!NA_SEQUENCE 1.0
ID   TVAF6073   standard; RNA; VRL; 1927 BP.
XX
AC   AF006073;
XX
SV   AF006073.1
XX
DT   14-JUL-1997 (Rel. 52, Created)
DT   03-MAR-2000 (Rel. 62, Last updated, Version 2)
XX
DE   Thogoto virus segment 3 PA polymerase subunit mRNA, complete cds.
XX
KW   .
XX
OS   Thogoto virus
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Thogotovirus.
XX
RN   [1]
RP   1-1927
RA   Leahy M., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   "The fourth genus in the Orthomyxoviridae: sequence analyses of two Thogoto
RT   virus polymerase proteins and comparison to influenza viruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1927
RA   Leahy M., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   ;
RL   Submitted (30-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Virology and Environmental Microbiology, NERC, Mansfield Road,
RL   Oxford OX1 3SR, Great Britain
XX
DR   SWISS-PROT; P27194; RRP2_THOGV.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1927
FT                   /chromosome="segment 3"
FT                   /db_xref="taxon:11569"
FT                   /note="THORNA3-D00540"
FT                   /organism="Thogoto virus"
FT   CDS             21. .1889
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P27194"
FT                   /note="THOV PA"
FT                   /product="PA polymerase subunit"
FT                   /protein_id="AAB62893.1"
FT                   /translation="MTDRPDHIDSRVWELSETQEDWITQVHGHVRRVVECWKYTICCLI
FT                   SNMHTHRGAPQYDVFKWQDRSTIEWICSKKKVQYPERDTPDLYDNERAVAYKVLLVSDL
FT                   SDHSPTSGIYHDLAFNLEGEAEESCALVLRGSQLQDIKGFLCRALEWVVSNNLTQEVVE
FT                   TISGEAKLQFSVGTTFRTLLKRDTDWDVIPTPRVEPNVPRIEGRRWTQMKKLPLLKEKE
FT                   GPPSPWRALLLGADSEYIVCPPGTDQEAISWIHSQSEIECIRESKSTPASVITCLTSSL
FT                   QSFAEGNPVRSRIHEDIIAFGINKKQEKKQSASSSASGEWKRAEYQVEEMSLPPWVEEE
FT                   MVLLRSDQEDNWIELEKNAIYTEVDGVAEGLVDKYIEIVGRTKVASVIEKWQIAATRTF
FT                   SQLHTDRSRITACPIITRDPSGNCQFWGMVLLGPHHVKRDTDNAPLLIAEIMGEDTEEK
FT                   YPKHSVFSLKVEGKQFLLSLKITSFSRNKLYTFSNIRRVLIQPASIYSQVVLSRAAENN
FT                   SLNLEVNPEIQLYLEGAQRGMTLYQWVRMILCLEFLMAIYNNPQMEGFLANMRRLHMSR
FT                   HAMMERRQVFLPFGSRPEDKVNECIINNPIVAYLAKGWNSMPNVYY"
XX
SQ   Sequence 1927 BP; 619 A; 422 C; 475 G; 411 T; 0 other;

AF006073  Length: 1927  October 1, 2002 09:16  Type: N  Check: 7425  ..

       1  agcaaaaaca agcacttgac atgacagaca ggcccgacca catagacagc
      51  agagtatggg agctgtcaga aacacaggaa gactggatca cccaagtcca
     101  cggacacgtc aggagagtgg tagaatgctg gaaatacacc atatgctgtc
     151  tgataagcaa catgcacact cacaggggag caccacaata tgatgtcttc
     201  aagtggcagg acaggagcac catagaatgg atatgtagca agaaaaaagt
     251  ccaatacccg gaaagagaca caccagatct gtatgacaat gaacgggcag
     301  ttgcatacaa ggtacttctg gtttctgatc tctctgacca ttctcctaca
     351  tcaggcattt accacgacct agccttcaat ttagaagggg aggcagaaga
     401  atcttgtgca ttggtgctaa gagggagcca actgcaagac ataaaggggt
     451  ttttgtgcag ggcactggaa tgggttgtgt caaacaatct aacacaggag
     501  gttgtggaaa ctatcagtgg ggaggccaag ctccaatttt ctgtaggcac
     551  cactttcagg accttactga agagagacac agattgggat gtgataccta
     601  ctcccagagt agaacccaat gtcccaagga ttgaaggaag gaggtggaca
     651  cagatgaaga aacttccttt gctaaaagaa aaagagggcc cacccagccc
     701  atggagggct ctattgctgg gagcagactc agaatacatc gtgtgtcccc
     751  ccggaacaga ccaagaggcc atctcttgga tacactctca gtctgagatt
     801  gaatgcatta gggaatccaa atctacccca gcatcagtca tcacctgcct
     851  aacgtcaagc cttcaatcat ttgcagaggg gaacccagtg agatctagga
     901  tacacgaaga catcattgca tttggcataa acaaaaagca agagaagaag
     951  cagtctgctt catcttcagc ctctggagag tggaaaagag cagaatatca
    1001  agtggaagaa atgtccttgc caccctgggt agaggaagag atggtcctac
    1051  tcaggagtga ccaggaagac aactggatag agctagagaa aaatgcgatt
    1101  tacactgagg ttgatggagt agcagaaggg ctggtggaca agtacataga
    1151  gatagtgggc agaacaaaag tggcatctgt catagaaaaa tggcaaattg
    1201  ctgccacccg gaccttctca caactgcaca ccgatcgtag cagaattaca
    1251  gcttgcccca taatcaccag agacccatca ggcaattgcc aattctgggg
    1301  gatggtgctg cttgggcccc atcatgtaaa gagagacaca gacaatgctc
    1351  cgctgcttat agcggagata atgggagaag acacagaaga gaagtaccct
    1401  aagcacagcg tattttctct aaaggttgaa gggaaacagt ttctgctctc
    1451  tctgaagata acctcttttt cgaggaataa actgtacaca ttctccaaca
    1501  ttagaagagt tttgatacag ccagcatcaa tttactcaca agttgtactc
    1551  tctagggcag ctgagaacaa cagcctcaat ttagaggtaa acccagagat
    1601  ccagctgtac ctagaaggcg ctcagagggg gatgactctc taccaatggg
    1651  tccggatgat cctatgtttg gaatttctga tggcaattta caacaaccct
    1701  cagatggaag gctttcttgc aaacatgaga cgactccata tgtccaggca
    1751  tgccatgatg gaaagaagac aggtcttcct accttttggg tcaagaccag
    1801  aagacaaagt taacgagtgc ataatcaaca acccaatagt ggcttatttg
    1851  gcaaaaggct ggaacagcat gcctaatgtg tactactaga gaggggtatt
    1901  gcaagaaaaa agtgctttga tttctct