Sequence of DPV Prunus necrotic ringspot virus

Prunus necrotic ringspot virus CH71 putative movement protein gene, complete cds; and coat protein gene, partial cds.

ACC No: AF034995

Dated: 2003-09-16 | Length: 1664 | CRC: 248667747

                !!NA_SEQUENCE 1.0
ID   AF034995   standard; genomic RNA; VRL; 1664 BP.
XX
AC   AF034995;
XX
SV   AF034995.1
XX
DT   05-MAY-1998 (Rel. 55, Created)
DT   16-SEP-2003 (Rel. 77, Last updated, Version 4)
XX
DE   Prunus necrotic ringspot virus CH71 putative movement protein gene,
DE   complete cds; and coat protein gene, partial cds.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Ilarvirus.
XX
RN   [1]
RP   1-1664
RX   MEDLINE; 98343741.
RX   PUBMED; 9680147.
RA   Hammond R.W., Crosslin J.M.;
RT   "Virulence and molecular polymorphism of Prunus necrotic ringspot virus
RT   isolates";
RL   J. Gen. Virol. 79(Pt 7):1815-1823(1998).
XX
RN   [2]
RP   1-1664
RA   Hammond R.W., Crosslin J.M.;
RT   ;
RL   Submitted (19-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL   MPPL, USDA/ARS, Rm 252, Building 011A BARC-West, Beltsville, MD 20705, USA
XX
DR   GOA; O71143.
DR   SPTREMBL; O71142; O71142.
DR   SPTREMBL; O71143; O71143.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1664
FT                   /db_xref="taxon:37733"
FT                   /mol_type="genomic RNA"
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /strain="CH71"
FT                   /segment="RNA3"
FT   CDS             63. .920
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O71142"
FT                   /note="cell to cell movement protein"
FT                   /product="putative movement protein"
FT                   /protein_id="AAC41036.1"
FT                   /translation="MADVSKNPSTSDFSVVECSMDEMSQISEDLHNLMLSDEMRHLPTK
FT                   GCHILHLANLPKSNILRLASKEQKGFLSRQADKVKKKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLSDKKVLMSMVRSRILAGTEGC
FT                   DIAPENIEVKRLGDNRRVLTIQPRAPVIEELKDEEIEPIGSIGTENHMEEKVVTTKVGG
FT                   TGSA"
FT   CDS             1007. .>1664
FT                   /codon_start=1
FT                   /db_xref="GOA:O71143"
FT                   /db_xref="SPTREMBL:O71143"
FT                   /note="capsid structural protein"
FT                   /product="coat protein"
FT                   /protein_id="AAC41037.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNDALVPLRAQQRAVNNPNRNPNR
FT                   VSSAAGRDARSKPVVKTTWTVRGPNVPPRVPKGFVAHSHREVTPNEVVKYLSIDFTTTF
FT                   PQLMGQNLTLLTVINRMNSMSSNGWIGMVEDYRVDNPDGPNALSRKGFLKDQPRGWQFE
FT                   PPSDLDFDTFAKTHRIVIEFKTEVPVGAKVLVRDLYVVVSDLPRVQIPTDVLLVDE"
XX
SQ   Sequence 1664 BP; 448 A; 336 C; 442 G; 438 T; 0 other;

AF034995  Length: 1664  September 23, 2003 10:26  Type: N  Check: 1633  ..

       1  gggtttagag attgttggtt gtctattcgt aactccactt gttggttgaa
      51  tagtgtttca gtatggccga tgtcagtaaa aacccctcca ctagtgattt
     101  ttcagtagtg gagtgttcta tggacgaaat gagccagatt tctgaggatt
     151  tgcacaacct catgttatcc gatgaaatga ggcatttgcc gactaagggc
     201  tgtcatattt tacatttagc aaatctcccg aaatccaata tattgaggtt
     251  agcgagcaag gagcagaaag gcttcttgtc gcgacaggcc gataaagtga
     301  agaagaaaat ttacagatgt gtaggccgag tattcctcgt ttatgtaccg
     351  attattcaag caacgacatc gggtttaatt acccttaagt tgcagaactc
     401  cgatacagga gaaatttcag acgtcgtgac agacgtcgaa gccaaccgtg
     451  cctttgtgat tatggacaga tggggtcgtt ccctggtaga gtcggctgat
     501  ttaaatctgc tttactctat ttcatgtcca gacgtccgac ctggagccag
     551  agtgggagaa atgatggctt tctgggatga gaggatgtcg aggcagcaga
     601  cgtacttgga gaaaggaaat ccaattttat ttccgattgc cgagacaaaa
     651  ccttcgaaat atctaagcga taagaaggtt ttgatgtcta tggtccgaag
     701  taggatcttg gcaggtacag aaggttgcga tatagccccc gaaaatattg
     751  aagttaaacg tcttggggat aaccggagag tgttgactat tcaaccgaga
     801  gctccagtga tagaggaact taaggacgaa gaaattgaac cgataggttc
     851  cattggtaca gagaatcata tggaagagaa agtagtgacc accaaagttg
     901  gtggaactgg aagtgcttaa gcgacattgt cgcgagcgag cgcgtttgcg
     951  cgagcgttat tttctttctt ctctccctct ctttgatttc tcgattacga
    1001  ccgaaaatgg tttgccgaat ttgcaatcat acccacgctg gtggatgccg
    1051  ttcttgcaag aagtgccatc cgaatgatgc tctggtccca ctcagagcgc
    1101  aacagagggc tgtgaataac ccgaatagaa acccgaatag ggtttcgagc
    1151  gctgcagggc gtgatgcccg atctaagccg gtcgtgaaga ccacttggac
    1201  cgtgagaggt ccgaatgtac ccccccgagt tccgaagggt tttgtggcac
    1251  atagtcaccg agaggtgacg ccaaacgagg tagtgaagta tcttagtata
    1301  gacttcacga ctaccttccc gcaattaatg ggtcaaaact tgaccctatt
    1351  aactgttatc aaccgaatga actctatgag ttcgaatggt tggataggga
    1401  tggtggagga ctatagggtg gataaccccg atggtccgaa cgctctgtct
    1451  aggaagggat ttttgaagga ccaaccgcga ggttggcaat tcgagccccc
    1501  gtccgattta gatttcgata cttttgcgaa gacgcatcgt atcgtcatcg
    1551  aattcaagac cgaagtgccc gttggggcaa aggtcttggt tagggatctg
    1601  tacgtagtgg taagtgattt accacgagtg caaattccga ctgatgtctt
    1651  gctggtcgat gaag