Sequence of DPV Andean potato latent virus

Andean potato latent virus replicase protein gene, partial cds; and virion protein gene, complete cds.

ACC No: AF035402

Dated: 2005-04-15 | Length: 1705 | CRC: 2043013863

                !!NA_SEQUENCE 1.0
ID   AF035402   standard; genomic RNA; VRL; 1705 BP.
XX
AC   AF035402;
XX
SV   AF035402.1
XX
DT   02-JUL-1998 (Rel. 56, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Andean potato latent virus replicase protein gene, partial cds; and virion
DE   protein gene, complete cds.
XX
KW   .
XX
OS   Andean potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC   Tymovirus.
XX
RN   [1]
RP   1-1705
RA   Mackenzie A.M., Gibbs A.J., Keese P., Osorio-Keese M.E., Torronen M.,
RA   Ding S.W., Howe J., Srifah P., Skotnicki M.L.;
RT   "Taxonomy of the tymoviruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1705
RA   Mackenzie A.M., Gibbs A.J., Keese P., Osorio-Keese M.E., Torronen M.,
RA   Ding S.W., Howe J., Srifah P., Skotnicki M.L.;
RT   ;
RL   Submitted (20-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Acton, Canberra, ACT 2601, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1705
FT                   /db_xref="taxon:73819"
FT                   /mol_type="genomic RNA"
FT                   /organism="Andean potato latent virus"
FT   CDS             <1. .1026
FT                   /codon_start=1
FT                   /db_xref="GOA:O89513"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="InterPro:IPR007095"
FT                   /db_xref="UniProt/TrEMBL:O89513"
FT                   /product="replicase protein"
FT                   /protein_id="AAC25015.1"
FT                   /translation="KVNDGSIFSNWKACQTLALMHDYVILVLVPVKKYQRVFDSLDRPS
FT                   HIYYHCGHTPTQLSQWCQQHLKHSSYTTNDYTAFDQSQHGEAVILECLKMQRLNIPPFL
FT                   ISLHSTLKRNVSTQFGPLTCMRLTGEPGTYDDNSDYNLAVIYSQYSLSANPILISGDDS
FT                   VIAGSPLVSPSWPQIEPLLHLRFKTEHTKYPLFCGYYLSPLGAARNPFALFAKLMICVD
FT                   DGSLEDKKLSYLSEFSVGHLSGDCIQAILPPSLIKYQSACHDFFCRNCTPSQKILLSLD
FT                   PIPENKILQLLLKVRWASQAFFSYLPQKARELLISRSSLPSLHSDPKISLLESELLPFF
FT                   N"
FT   CDS             1029. .1595
FT                   /codon_start=1
FT                   /db_xref="GOA:O89514"
FT                   /db_xref="HSSP:1E57"
FT                   /db_xref="InterPro:IPR000574"
FT                   /db_xref="UniProt/TrEMBL:O89514"
FT                   /product="virion protein"
FT                   /protein_id="AAC25016.1"
FT                   /translation="MEDQTPAVSKQPSINAPGYNLSPPSSQLSSSFELPFQFQATTFGA
FT                   AETAAQVSLSSSTVISTIAKNFRHAKLIQCHAIITPTYLAIANPITINLVWVPDSSTAK
FT                   PSEILNVYGGTSFTFGGAFCSTKSIIVPLPMNSVNLMLKDSALYTDGPKLLAYSPAPAT
FT                   PSKSPVATIQISGKILLSSPLLQAS"
FT   3'UTR           1596. .1705
XX
SQ   Sequence 1705 BP; 377 A; 574 C; 268 G; 486 T; 0 other;

 AF035402  Length: 1705  April 19, 2005 08:49  Type: N  Check: 610  ..

       1  aaagtcaacg atggttcaat attctccaac tggaaggctt gtcagactct
      51  tgctttaatg catgattatg tcatccttgt tcttgttcct gtcaagaagt
     101  accagcgagt ttttgattcc ctcgaccggc cctcacatat ctattatcat
     151  tgcggtcaca cccctactca gctttctcaa tggtgccagc aacacctcaa
     201  gcacagttct tacaccacca atgattacac tgcttttgat caatcccaac
     251  atggcgaagc tgtcattctg gaatgcctca aaatgcaaag gctcaacatt
     301  cccccttttc tgatctcctt gcattccaca ctcaagcgca acgtttccac
     351  ccaattcggt cccctgacct gcatgcgcct cacaggtgag cctggcactt
     401  atgacgacaa ctcagattac aatctggctg tcatctactc tcagtactct
     451  ctgtcagcca atcccatcct catatccggc gatgattctg tcattgctgg
     501  ttcccccctt gtttctccat cttggccaca aattgagccc cttcttcacc
     551  ttcgtttcaa aactgagcac accaaatacc ctttgttttg cgggtactat
     601  ctctctcctc tcggagctgc aaggaaccca tttgcgctct tcgccaaact
     651  catgatctgc gttgatgatg gaagccttga ggacaaaaaa ctgtcttact
     701  tgtctgaatt ctcagtaggt catctctccg gcgactgcat ccaagccatc
     751  ttacctccat cgctcatcaa gtatcagtca gcatgtcatg acttcttctg
     801  ccgcaattgc accccatccc aaaaaatcct tctcagcctg gatcccatcc
     851  ctgagaacaa gatccttcaa ctcctcctca aagttcgttg ggcttcacag
     901  gccttctttt cttacctccc ccaaaaagcc agagagttgc taatctctcg
     951  ctccagcctt ccttcccttc actctgatcc caaaatctcc ctactagagt
    1001  ctgaattgct tccctttttc aattaattat ggaagatcag actcctgccg
    1051  tttctaaaca gccctccatt aatgctcccg gttacaatct ttcacctcct
    1101  agctctcaac tctcttcctc ttttgagctg ccttttcagt tccaggctac
    1151  caccttcggc gctgccgaga cagctgctca agttagtctc tcctcttcca
    1201  ccgtgatctc caccattgcc aagaactttc ggcatgctaa gctcattcaa
    1251  tgccacgcca tcatcactcc cacctacttg gccatagcca atcccatcac
    1301  catcaacctc gtctgggtcc ctgacagctc caccgcaaag cccagcgaga
    1351  tactcaatgt ctatggcggc acttctttca cttttggcgg tgccttttgc
    1401  tccaccaaat ccatcattgt tcctctcccc atgaactccg ttaacctcat
    1451  gctcaaggac agtgccctct acaccgacgg ccctaagctc cttgcatatt
    1501  ctcctgcccc agccactcct tccaaatccc cagtggccac tattcaaatc
    1551  tcaggcaaga ttctcttgtc ttctcctctt ctccaagcct cttaaacccc
    1601  tgcatcctcc atctcctatg gtaattgtgg acagttccac tccctttagc
    1651  acacaaaggt ccaatcgggt gcgactcccc cccctcctgt gggctacagg
    1701  aacca