Sequence of DPV Wild cucumber mosaic virus
Wild cucumber mosaic virus replicase protein gene, partial cds; and virion protein gene, complete cds.
ACC No: AF035633
Dated: 2005-04-15 | Length: 1379 | CRC: -1914509661
!!NA_SEQUENCE 1.0
ID AF035633 standard; genomic RNA; VRL; 1379 BP.
XX
AC AF035633;
XX
SV AF035633.1
XX
DT 02-JUL-1998 (Rel. 56, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Wild cucumber mosaic virus replicase protein gene, partial cds; and virion
DE protein gene, complete cds.
XX
KW .
XX
OS Wild cucumber mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC Tymovirus.
XX
RN [1]
RP 1-1379
RA Mackenzie A.M., Gibbs A.J., Keese P., Osorio-Keese M.E., Torronen M.,
RA Ding S.W., Howe J., Srifah P., Skotnicki M.L.;
RT "Taxonomy of the tymoviruses";
RL Unpublished.
XX
RN [2]
RP 1-1379
RA Mackenzie A.M., Gibbs A.J., Keese P., Osorio-Keese M.E., Torronen M.,
RA Ding S.W., Howe J., Srifah P., Skotnicki M.L.;
RT ;
RL Submitted (23-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL Research School of Biological Sciences, Australian National University,
RL Biology Place, Acton, Canberra, ACT 2601, Australia
XX
FH Key Location/Qualifiers
FH
FT source 1. .1379
FT /db_xref="taxon:70824"
FT /mol_type="genomic RNA"
FT /organism="Wild cucumber mosaic virus"
FT CDS <1. .650
FT /codon_start=3
FT /db_xref="UniProt/TrEMBL:O89517"
FT /product="replicase protein"
FT /protein_id="AAC25017.1"
FT /translation="AHGEPRTLCTTPTTTSPSCTLKYDLRDSPVLVSGDDSVVAGSPPE
FT QPSWPSVRRLLHLRFKIERTPYPLFCGYYVSPFGACRNPLALFAKLMICVDDGSLPDKM
FT LSYLTEFSVGHLLGDSVSSALPPSLLSYHSACHDFFCRHATPSQKLLLSNDPIPESKLL
FT RLLLRVKWVSKAFFSLLPQKARDLLVSKSSLPSFMSDPKVSQLESSLHLSFN"
FT CDS 654. .1220
FT /codon_start=1
FT /db_xref="GOA:O89518"
FT /db_xref="HSSP:1E57"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="UniProt/TrEMBL:O89518"
FT /product="virion protein"
FT /protein_id="AAC25018.1"
FT /translation="MTTDTSVSAKQPSINAPGHVLSIPDTPRSPSFPFKFQIHVANFGP
FT KEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPAS
FT PTDILKIYGGSSYTFGGAINSTRPIELPLPINSVNDMLKDSVSYLDTPKLLVFSPAPAK
FT ATSVTLASPQISGEVLCSSQLLQAL"
FT 3'UTR 1221. .1379
XX
SQ Sequence 1379 BP; 238 A; 532 C; 252 G; 357 T; 0 other;
AF035633 Length: 1379 April 19, 2005 08:49 Type: N Check: 7578 ..
1 gagctcacgg tgagccccgg accctatgca cgacaccgac tacaacatcg
51 ccgtcctgta ctctcaaata cgacctccgc gactccccgg ttcttgtttc
101 cggtgacgat tcagttgttg ccggctcccc tcccgaacaa ccctcttggc
151 cttccgttcg ccgcctgctc caccttcgtt tcaaaatcga gcggactcct
201 tacccccttt tctgcggtta ttacgtctcc ccttttggcg cctgtcgcaa
251 ccccctcgcc ctctttgcca agcttatgat ctgcgttgat gatgggtccc
301 tccccgacaa gatgctctct tacttgaccg agttctccgt tggtcatctc
351 cttggcgatt ccgtctcgtc cgctcttccc ccctccctcc tctcttatca
401 ctccgcctgc cacgacttct tttgccgcca tgcaacccct tctcagaagc
451 tccttctctc caatgacccc attccagaaa gcaagcttct ccggttgctt
501 ctgcgagtga agtgggtttc caaggccttc ttctcccttc ttccccagaa
551 agctcgggat ctcttagttt ccaaatcctc gctcccgagc tttatgagcg
601 accccaaagt gtcccagcta gagtcttctt tgcatctctc tttcaattga
651 aatatgacta ccgacacttc cgtgagcgcc aaacagcctt ccatcaacgc
701 tcccggccat gtcctctcca tccccgacac cccccgctcc ccttctttcc
751 cgttcaagtt ccagatccat gtcgcgaact tcggccccaa agaagtttcg
801 tcccagatct ctctctcctc ctgccccgaa ctccttcgac ttacttccct
851 ctttcggcac gcccgacttc tctcagctaa ggccattatc accccctttg
901 acggggtggt atcgcttcct atcacggtcg acctggcctg ggtctctgcc
951 aactctccag cctcccccac cgacatcctc aagatctacg gtggttcctc
1001 ctacaccttt ggcggcgcca tcaactctac ccgccccatc gaactcccgc
1051 tgcccataaa ctccgtcaat gacatgctta aggacagcgt ttcctacctg
1101 gacaccccca agctcctcgt cttttcccct gcccccgcca aggcaacctc
1151 cgtcaccctc gcctctcctc agatcagcgg cgaggttctc tgctcttccc
1201 aactcctcca agccctctag tgcacccaga acttggttct gcgcggccaa
1251 tgcgataatt ggtagtgttt tcggctccac ttaaatcgaa gcccgtaatt
1301 gagtccagtg actctccctc tagcacacag aggtcaaacc gggtgcaacc
1351 ccccctcccc ccgtaggtta acgggacca