Sequence of DPV Bamboo mosaic virus

Bamboo mosaic virus isolate S truncated replication protein (BaMV-DRNA2-7) gene, from defective RNA, complete cds.

ACC No: AF047978

Dated: 2001-03-21 | Length: 1079 | CRC: -1003741632

                !!NA_SEQUENCE 1.0
ID   AF047978   standard; RNA; VRL; 1079 BP.
XX
AC   AF047978;
XX
SV   AF047978.1
XX
DT   11-MAR-1999 (Rel. 59, Created)
DT   21-MAR-2001 (Rel. 67, Last updated, Version 3)
XX
DE   Bamboo mosaic virus isolate S truncated replication protein (BaMV-DRNA2-7)
DE   gene, from defective RNA, complete cds.
XX
KW   .
XX
OS   Bamboo mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potexvirus.
XX
RN   [1]
RP   1-1079
RX   MEDLINE; 99330492.
RX   PUBMED; 10403698.
RA   Yeh T.Y., Lin B.Y., Chang Y.C., Hsu Y.H., Lin N.S.;
RT   "A defective RNA associated with bamboo mosaic virus and the possible
RT   common mechanisms for RNA recombination in potexviruses";
RL   Virus Genes 18(2):121-128(1999).
XX
RN   [2]
RP   1-1079
RA   Lin N.S., Yeh T.Y., Lin B.Y., Hsu Y.H.;
RT   ;
RL   Submitted (13-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL   Botany, Academia Sinica, Taipei, Taiwan 115, R.O.C.
XX
DR   SPTREMBL; Q9YLS2; Q9YLS2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1079
FT                   /db_xref="taxon:35286"
FT                   /note="defective RNA"
FT                   /organism="Bamboo mosaic virus"
FT                   /isolate="S"
FT   CDS             94. .876
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9YLS2"
FT                   /gene="BaMV-DRNA2-7"
FT                   /product="truncated replication protein"
FT                   /protein_id="AAD15749.1"
FT                   /translation="MALVSKVFDSITDPSLRAVLQEEAHSQVKQVLKDTALYSRYALLP
FT                   TAANTLERYAIPHNPFSTKLHTHAAAKALENDLYRTASYLLPKERVSFLFMKPSKMQYF
FT                   RRRGDVDTFINADIVAKDLARYPLETIYPRLPEITTKMAFIGDSLHYFQPEVLEHIFTS
FT                   SPQLETLLATIVLPPEATLRLKSLYPEIYTLHYMPRKFLYKPGGLSGGEYEHDYKDLTW
FT                   LKIGHVTTASMCLTVDRVESKAANHLLLIRRGRLKLQP"
XX
SQ   Sequence 1079 BP; 311 A; 334 C; 208 G; 226 T; 0 other;

AF047978  Length: 1079  December 21, 2001 14:50  Type: N  Check: 6192  ..

       1  gaaaagcatt ccaaacgaaa cgaaaagaaa ttaaaagacg aagaagacaa
      51  actgccaatt gtcccctaca atcgccctgc gcgtgcggca acaatggcac
     101  tcgtttctaa agtctttgac agcatcaccg acccatcctt gagggctgta
     151  ctccaagagg aagcgcactc ccaagttaaa caagtgctca aagacacagc
     201  gctctactcc agatacgccc tcctccccac tgctgcaaac acgcttgaac
     251  ggtacgcaat ccctcataac ccgttcagca caaaattaca cacacacgca
     301  gcagcaaaag cccttgagaa tgacctctac cggacggcct catatctcct
     351  cccaaaagaa agagtgtcat ttctctttat gaagccatct aaaatgcaat
     401  atttccggag aagaggagat gtcgacacct tcatcaacgc tgacatcgtt
     451  gctaaagacc ttgccaggta ccctctcgag actatctacc cccgcctccc
     501  ggaaatcaca acaaaaatgg cttttattgg ggacagcctg cattacttcc
     551  agcctgaggt gctggagcac attttcacaa gctccccaca actggagacc
     601  ctgctcgcca cgatcgtcct tccccccgaa gccacactca ggcttaaaag
     651  tctataccca gaaatctaca cgttgcacta catgccccga aaatttctct
     701  acaaacctgg gggcctatca ggcggggaat acgaacatga ttacaaggac
     751  ctaacttggc tcaagattgg gcatgtcaca actgcttcca tgtgcctcac
     801  agtcgaccgg gtggagtcta aagcggccaa ccacttacta ctcatacggc
     851  gtggaaggct caaactccaa ccctaacgtc atccaggctc gactccccaa
     901  cgcgccccta ccagctcttc ccgaaccaac atcagactaa acgttgcatg
     951  atcgtaaaac atgcccggct taccgtgagc cgcctttgaa agaaaggttt
    1001  acacggactc tgttgcgtta cgcacgtacc taacccgtgc cagcagaata
    1051  aagacctttt ggtttctaca gttttttcc