Sequence of DPV Turnip mosaic virus

Turnip mosaic virus strain CA7 polyprotein mRNA, partial cds.

ACC No: AF103786

Dated: 1999-04-06 | Length: 944 | CRC: -248701193

                !!NA_SEQUENCE 1.0
ID   AF103786   standard; RNA; VRL; 944 BP.
XX
AC   AF103786;
XX
SV   AF103786.1
XX
DT   06-APR-1999 (Rel. 59, Created)
DT   06-APR-1999 (Rel. 59, Last updated, Version 1)
XX
DE   Turnip mosaic virus strain CA7 polyprotein mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-944
RA   Sohn S.-H., Choi H.-S., Jeon W.-B., Ryu T.-H., Hwang Y.-S.;
RT   "The coat protein gene of Turnip Mosaic Virus isolated from Chinese cabbage
RT   in Korea";
RL   Unpublished.
XX
RN   [2]
RP   1-944
RA   Sohn S.-H., Hahn J.-H., Hwang Y.-S.;
RT   ;
RL   Submitted (02-NOV-1998) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, National Institute of Agricultural Science and Technology,
RL   Suwon 441-707, Republic of Korea
XX
DR   SPTREMBL; Q9WA62; Q9WA62.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .944
FT                   /country="South Korea"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /strain="CA7"
FT                   /specific_host="Chinese cabbage"
FT   CDS             <1. .899
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:Q9WA62"
FT                   /product="polyprotein"
FT                   /protein_id="AAD20297.1"
FT                   /translation="DGAEVCVYHQAGEMLDAGLTDEQKQAEKEKKEREKAEKERERQKQ
FT                   LALKKGKDVAQEEGKRDKEVNAGTSGTFSVPRLKSLTSKVRVPRYEQRVALNLDHLILY
FT                   TPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMW
FT                   VMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLT
FT                   DMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHT
FT                   TEDVNRNMHNLLGVKGL"
FT   mat_peptide     33. .896
FT                   /note="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 944 BP; 305 A; 189 C; 257 G; 193 T; 0 other;

AF103786  Length: 944  December 21, 2001 14:51  Type: N  Check: 6121  ..

       1  aagatggtgc tgaagtgtgt gtttatcacc aggcaggtga aatgcttgat
      51  gcaggtctga cagacgagca aaagcaggcg gagaaggaga agaaggagag
     101  agagaaggca gaaaaggaac gagagaggca gaagcagttg gcactcaaga
     151  aaggcaagga cgttgcgcaa gaagagggaa aacgcgacaa ggaagtaaac
     201  gctggaacct ctggaacttt cagtgtaccc agacttaaga gtctgacaag
     251  caaggtgcgc gtgccaagat acgagcaaag agtggctcta aacctcgatc
     301  atctaatcct atacacgccg gagcagacgg atctatccaa cacacgttca
     351  acgcgaaagc agtttgacac atggtttgaa ggtgtaatgg ctgattacga
     401  actgacggag gacaaaatgc aaatcattct caatggttta atggtctggt
     451  gcattgagaa cggaacctcc ccgaacataa acggaatgtg ggtgatgatg
     501  gacggcgatg atcaggtgga attcccgatc aaaccgctca ttgaccacgc
     551  caaacccaca tttaggcaga taatggccca tttcagtgac gtagctgaag
     601  cgtacattga aaagcgtaac caagaccgac catacatgcc acgatatggt
     651  cttcagcgca atttaaccga catgagctta gctcgatacg cgtttgattt
     701  ctatgaaatg acttctagaa ctccaatacg tgcgagagaa gcacacatcc
     751  agatgaaagc agcagcactg cgtggcgcaa ataacaattt gttcggcttg
     801  gatggaaacg ttggtacaac ggtagagaac acggagaggc atacgaccga
     851  ggacgttaat cggaacatgc ataacttact tggcgttaag gggttgtgaa
     901  gttgtatgcg agtagactat aagtatttaa gtttactcgt tagt