Sequence of DPV Potato virus X
Potato virus X replicase, 25 kDa movement protein, 12 kDa movement protein, 8 kDa movement protein, and coat protein genes, complete cds.
ACC No: AF111193
Dated: 2000-10-05 | Length: 6435 | CRC: -1604269750
!!NA_SEQUENCE 1.0
ID AF111193 standard; RNA; VRL; 6435 BP.
XX
AC AF111193;
XX
SV AF111193.1
XX
DT 07-MAY-2000 (Rel. 63, Created)
DT 05-OCT-2000 (Rel. 65, Last updated, Version 2)
XX
DE Potato virus X replicase, 25 kDa movement protein, 12 kDa movement protein,
DE 8 kDa movement protein, and coat protein genes, complete cds.
XX
KW .
XX
OS Potato virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potexvirus.
XX
RN [1]
RP 1-6435
RX MEDLINE; 20329280.
RA Malcuit I., de Jong W., Baulcombe D.C., Shields D.C., Kavanagh T.A.;
RT "Acquisition of multiple virulence/avirulence determinants by potato virus
RT X (PVX) has occurred through convergent evolution rather than through
RT recombination";
RL Virus Genes 20(2):165-172(2000).
XX
RN [2]
RP 1-6435
RA Malcuit I., Marano M.R., Kavanagh T.A., de Jong W., Forsyth A.,
RA Baulcombe D.C.;
RT "The 25 kDa movement protein of PVX elicits subcellular fragmentation
RT leading to Nb-mediated cell death in potato";
RL Unpublished.
XX
RN [3]
RP 1-6435
RA Malcuit I., Kavanagh T.A.;
RT ;
RL Submitted (04-DEC-1998) to the EMBL/GenBank/DDBJ databases.
RL The Sainsbury Laboratory, John Innes Centre, Colney lane, Norwich NR4 7UH,
RL UK
XX
DR SPTREMBL; Q85247; Q85247.
DR SPTREMBL; Q9JEX6; Q9JEX6.
DR SPTREMBL; Q9JEX7; Q9JEX7.
DR SPTREMBL; Q9JEX8; Q9JEX8.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6435
FT /db_xref="taxon:12183"
FT /organism="Potato virus X"
FT /strain="ROTH1"
FT CDS 85. .4455
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JEX8"
FT /product="replicase"
FT /protein_id="AAF67818.1"
FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV
FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM
FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ
FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ
FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDWLTPEVR
FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS
FT SDLDKYAAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG
FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL
FT DCFTKMPAYAVNAEEDLAAIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR
FT EAKHQATKKAKRLAEIQESMRAEGETEPNEMSGGMGAIPSNAELPSTSDARQGLTLPTT
FT RPVPARWEDASFTDSSVEEEQVKLPEKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE
FT IQRDRSGTMIMPITEMVSELEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS
FT DVKNKRIGAITKTQAISWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG
FT KGSDITVVLPTNELRLDWSKKVPNTESYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE
FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD
FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMSTGRNDTFTYAGCQGLTK
FT PKVQIVLDHNTQVCSTNVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV
FT REQTLKEYEPAEVEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC
FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA
FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV
FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS
FT AWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI
FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKPSF
FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC
FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL"
FT CDS 4486. .5166
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JEX7"
FT /product="25 kDa movement protein"
FT /protein_id="AAF67819.1"
FT /translation="MDILIISLQSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR
FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA
FT PEFSLEPHFYLETSFRVPRKVANLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI
FT DEESETTLSRHGVEFVKPCQVTGLEFKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV
FT RAGT"
FT CDS 5147. .5494
FT /codon_start=1
FT /product="12 kDa movement protein"
FT /protein_id="AAF67820.1"
FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN
FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH
FT TCACGNNHSSH"
FT CDS 5427. .5639
FT /codon_start=1
FT /db_xref="SPTREMBL:Q85247"
FT /product="8 kDa movement protein"
FT /protein_id="AAF67821.1"
FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA
FT CKLDAETIRAIADLKPLSVERLSFH"
FT CDS 5650. .6363
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JEX6"
FT /note="CP"
FT /product="coat protein"
FT /protein_id="AAF67822.1"
FT /translation="MSAPASTTQTIGSTTSTTTKTAGATPATASGLFTIPDGDFFNTAR
FT AIVASNAVATNEDLRKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT TGTTTAEAVVTLPPP"
XX
SQ Sequence 6435 BP; 1998 A; 1518 C; 1463 G; 1456 T; 0 other;
AF111193 Length: 6435 December 21, 2001 14:52 Type: N Check: 2386 ..
1 gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt
51 gttacacacc cgcttggaaa agcaagtcta acaaatggcc aaagtgcgcg
101 aggtttacca atcctttaca gactccacca caaaaactct cattcaagat
151 gaggcctata gaaatattcg tcccatcatg gaaaaacata aactagctaa
201 cccgtacgct caaacggttg aagcagctaa tgatctagag gggttcggca
251 tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaaa
301 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga
351 acctgttaca tttatgttcc tcaaacctag gaagctaaac tacatgagaa
401 gaaacccacg aattaaggac attttccaca atgttgccat tgaaccgaga
451 gacgtggcaa ggtacccaaa ggaaacaata atagacaagc tcacagagat
501 cacaacggac acagcataca ttagtgacac tctgcacttc ttggatccga
551 gctacatagt agagacattc caaaactgcc caaaattgca aaccttgtat
601 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcaccca
651 cccgaacata tacagcctca aatacttcgg agatggtttc cagtatatac
701 caggcaacca tggtggtggg gcataccatc atgaatttgc tcatttacaa
751 tggctcaaag tgggaaagat caagtggagg gaccccaagg atagctttct
801 cggacatctc aattacacga ctgagcaggt tgagatgcat acagtgacag
851 tacagttgca ggaatcgttt gcggcaaacc acttgtactg catcaggaga
901 ggagactggc tcactccgga ggtacgcact ttcggacaac ctgacaggta
951 tgtgattcca ccacaaatct ttctcccgaa agttcacaac tgcaagaagc
1001 cgattctgaa gaaaactatg atgcagctct tcttgtacgt tagaacagtc
1051 aaggtcgcaa aaaattgtga catttttgcc aaagtcagac aattgattaa
1101 atcttctgac ttggacaaat atgctgctgt ggaactggtt tacctagtga
1151 gttacatgga gttccttgct gatttacaag ccaccacttg cttctcagac
1201 acactttctg gtggcttgct aacaaagacc cttgcaccgg tgagggcttg
1251 gatacaagag aaaaaaatgc aactgtttgg tcttgaggac tacgcgaagt
1301 tagtcaaagc agttgatttc cacccagtgg atttttcttt taaagtggaa
1351 acttgggact ttagattcca ccccttgcaa gcgtggaaag ccttccgacc
1401 aagggaagtg tcggacgtag aggaaatgga aagtttattc tcagatgggg
1451 acctgcttga ttgcttcaca aaaatgccag cctatgcagt aaacgcagag
1501 gaagatttag ctgcaatcag gaaaacgcct gagatggatg tcggtcaaga
1551 agttaaagaa cctgcaggag acagaaacca atactcaaac cctgcagaaa
1601 ccttcctcaa caagctccac aggaaacaca gtagggaggc gaaacatcaa
1651 gccacaaaga aagctaaacg cctagctgaa atccaggagt ccatgagagc
1701 tgaaggtgag actgaaccaa atgaaatgag tgggggcatg ggggcaatac
1751 ccagcaatgc tgaacttccc agcacgagtg atgctagaca aggactcaca
1801 ctcccaacca ctagacctgt tcccgcaagg tgggaagatg cttcattcac
1851 agactccagt gtggaagagg agcaggtgaa actccctgaa aaagaagccg
1901 ttgagacagc aacgcaacaa gtcatcgaag ggctcccttg gaaacactgg
1951 attcctcaac taaacgctgt tggattcaag gcgctagaaa ttcagaggga
2001 taggagtgga acaatgatca tgcccattac agaaatggtc tccgagttgg
2051 aaaaagagga cttcccggaa ggaactccaa aagagttggc acgagaattg
2101 ctcgctatga acagaagccc tgccaccatc cctctggacc tacttagggc
2151 cagagactac ggcagtgatg tgaagaacaa gagaattggt gccatcacaa
2201 agacacaagc aataagttgg ggcgagtact taacaggaaa gatagaaagc
2251 ctgactgaga ggaaagttgc gacttgtgtc attcacggag ctggaggctc
2301 tgggaaaagt catgccatcc aaaaggcatt gagagaaatt ggcaagggct
2351 cagacatcac cgtagtcctg ccgaccaatg aactgcgact agattggagt
2401 aagaaagtgc caaacactga atcatacatg ttcaagacct atgaaaaggc
2451 attaattggg ggaacaggca gtatagtcat ctttgacgat tactcgaaac
2501 ttcctcccgg ttacatagaa gccttaatct gtttctactc taaaatcaag
2551 ctagtcattc taacaggaga tagcagacaa agcgtctacc atgaaactgc
2601 tgaggacgcc tccatcaggc acttgggacc agcgacagag tacttctcaa
2651 aatattgccg atactatctc aatgccacac accgcaacaa gaaagacctt
2701 gcgaacatgc ttggcgtcta cagtgagaga acaggagtta cagaaatcag
2751 catgagcgcc gagttcttgg aaggaatccc aactttagta ccctcggatg
2801 agaagagaag gctgtacatg agcaccggga ggaatgacac gttcacatac
2851 gctggatgcc aggggttaac taagccgaaa gtacaaatag tattggacca
2901 caacacccaa gtgtgtagca caaatgtgat gtacacggca ctctctagag
2951 ccaccgacag gattcacttt gtgaacacaa gtgcaaactc ttcagccttc
3001 tgggaaaagt tagacagcac cccctatctc aagactttcc tatcagtggt
3051 gagagaacaa acactcaagg agtacgagcc ggcagaggta gagccaattc
3101 gagagcctga gccccagaca cacatgtgtg tcgagaatga ggagtctgtg
3151 ctagaagagt acaaagagga acttttggaa aagtttgaca gagagatcca
3201 ctctgaatcc catggccatt caaactgtgt ccaaacagaa gacacaacca
3251 tccagctgtt ttcgcatcaa caagcaaagg atgagaccct cctctgggcg
3301 accatagatg cgcggctcaa gaccagcaat caagagacaa acttccgaga
3351 attcttgagc aagaaggaca ttggggacgt cctgtttcta aactaccaaa
3401 aagctatggg tttgcccaaa gagcggattc ctttttcaca agaggtctgg
3451 gaagcttgtg ctcacgaagt gcaaagcaag tacctcagta agtcaaagtg
3501 caacttgatt aatgggactg tgagacagag cccagacttt gatgaaaaca
3551 aaatcatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaaacta
3601 ggtctaccca agattaagcc aggtcagacc atagcagctt tttatcagca
3651 gactgtgatg ctttttggaa ctatggcgag gtacatgcga tggttcagac
3701 aggctttcca gccaaaagaa gtcttcataa attgtgagac cacgccagaa
3751 gacatgtctg catgggcctt gaacaactgg aattttggca ggcctagttt
3801 ggctaatgac tacacagctt tcgaccagtc tcaggacgga gctatgctgc
3851 aatttgaggt gctcaaagcc aagcaccact gcataccaga ggaaatcatc
3901 caggcataca tagacattaa gactaatgca cagattttcc taggcacatt
3951 gtcaattatg cgcctgactg gtgaaggtcc tacttttgat gcaaacactg
4001 agtgcaacat agcttacacc catacaaagt ttgacatccc agccggaact
4051 gctcaagttt atgcaggaga cgactcagca ctggactgcg ttccggaagt
4101 gaagcctagt ttccacaggc ttgaagacaa attactcctc aagtcgaagc
4151 ctgtaatcac ccagcaaaag aaaggcagtt ggcctgagtt ttgtggttgg
4201 ctaattacac caaaaggggt aatgaaagac ccaatcaagc ttcatgttag
4251 cttaaaattg gccgaagcta agggcgagct caagaaatgc caagattcct
4301 atgaaattga tctgagttat gcctatgacc acaaggactc tctgcatgac
4351 ttgttcgatg agaaacagtg tcaggcacat acactcactt gcaggacact
4401 gattaagtca gggagaggca ctgtctcact tccccgcctc agaaactttc
4451 tttaaccgtt aagttacctt agagatttga ataagatgga tattctcatc
4501 attagtttgc aaagtttagg ttattctagg acttctaaat ctttagattc
4551 aggacctttg gtagtacatg cagtagccgg agccggcaag tccaccgccc
4601 taaggaagtt gattctcaga cacccaacat tcactgtgca tacactcggt
4651 gttcctgaca aggtgagtat cagaactaga ggcatacaga agccaggacc
4701 cattcctgag ggcaattttg caatactcga tgagtataca ttggacaaca
4751 ccacaaggaa ctcataccag gcactttttg ctgaccctta tcaggcacct
4801 gagtttagcc tagagcccca cttctacttg gaaacatcat ttcgagttcc
4851 gaggaaagtg gcaaatttga tagcaggttg cggctttgat ttcgagacca
4901 actcacagga agaagggcac ttagagatta ctggcatatt taaagggccc
4951 ctacttggga aggtgatagc cattgacgag gagtcagaga caacactgtc
5001 caggcatggt gttgagtttg ttaagccctg ccaagtgact ggacttgaat
5051 tcaaagtggt aactattgtg tctgccgcac caatagagga aattggccaa
5101 tccacagctt tttacaacgc catcaccagg tcaaagggat tgacatatgt
5151 ccgcgcaggg acatagactg accgctccgg tcaattctga aaaagtgtac
5201 atagtattag gtctatcgtt tgctttagtt tcaattacct ttctgctttc
5251 tagaaatagt ttaccccacg ttggtgacaa cattcacagc ttgccacacg
5301 gaggagctta cagagacggc accaaagcaa tcttgtacaa ctccccaaat
5351 ctagggtcac gagtgagtct acacaacgga aagaacgcag catttgcggc
5401 cgttttgcta ctgactttgc tgatctatgg aagtaaatac atatctcaac
5451 gcaatcatac ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc
5501 cttagtgagg actgaacctt gtgtcattaa gattactgga gaatcaatca
5551 cagtgttggc ttgcaaatta gacgcagaaa ccatcagagc cattgccgat
5601 ctcaagccac tttccgttga acggttaagt ttccattgat actcgaaaga
5651 tgtcggcacc agctagcaca acacagacaa tagggtcaac tacctcaact
5701 accacaaaaa ctgcaggcgc aactcctgcc acagcttcag gactgttcac
5751 catcccggat ggggatttct ttaacacagc ccgtgccata gtagccagca
5801 atgccgttgc aacgaatgag gacctcagaa agattgaggc tatctggaag
5851 gacatgaagg tgcccacaga cactatggca caggctgctt gggacttagt
5901 cagacactgt gctgatgtgg gctcatctgc ccaaacagag atgatagata
5951 caggtcctta ttccaatggc atcagcagag ctagactggc agcagcgatt
6001 aaagaggtgt gcacacttag acaattttgc atgaagtatg ccccagtggt
6051 atggaactgg atgttgacta acaacagtcc acctgctaac tggcaagcac
6101 aaggtttcaa gcctgagcac aaattcgctg cattcgactt cttcaacgga
6151 gtcaccaacc cagctgccat catgcccaaa gagggactca tccggccacc
6201 atctgaagca gaaatgaatg ctgcccaaac tgctgccttt gtgaagatta
6251 cgaaggccag ggcacaatcc aacgactttg ctagcctaga tgcagctgtc
6301 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct
6351 cccaccacca taattacgtc tacataaccg acgcctaccc cagtttcata
6401 gtattttctg gtttgattgt atgaataata taaat