Sequence of DPV African cassava mosaic virus
African cassava mosaic virus-Uganda Mild DNA-B strain ACMV/Ug//Mld BV1 (BV1) and BC1 (BC1) genes, complete cds.
ACC No: AF126801
Dated: 2003-03-10 | Length: 2720 | CRC: 1540063171
!!NA_SEQUENCE 1.0
ID AF126801 standard; DNA; VRL; 2720 BP.
XX
AC AF126801;
XX
SV AF126801.1
XX
DT 15-MAR-2000 (Rel. 63, Created)
DT 10-MAR-2003 (Rel. 75, Last updated, Version 3)
XX
DE African cassava mosaic virus-Uganda Mild DNA-B strain ACMV/Ug//Mld BV1
DE (BV1) and BC1 (BC1) genes, complete cds.
XX
KW .
XX
OS African cassava mosaic virus-Uganda Mild
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC African cassava mosaic virus.
XX
RN [1]
RP 1-2720
RX MEDLINE; 21103006.
RX PUBMED; 11172108.
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S.,
RA Fauquet C.M.;
RT "Recombination, pseudorecombination and synergism of geminiviruses are
RT determinant keys to the epidemic of severe cassava mosaic disease in
RT Uganda";
RL J. Gen. Virol. 82(Pt 3):655-665(2001).
XX
RN [2]
RP 1-2720
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S., Beachy R.N.,
RA Fauquet C.M.;
RT ;
RL Submitted (09-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Cell Biology, The Scripps Research Institute, 10550 Torrey Pines Road, La
RL Jolla, CA 92037, USA
XX
DR SPTREMBL; Q9JEA7; Q9JEA7.
DR SPTREMBL; Q9JEA8; Q9JEA8.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2720
FT /chromosome="DNA-B"
FT /country="Uganda"
FT /db_xref="taxon:222076"
FT /organism="African cassava mosaic virus-Uganda Mild"
FT /strain="ACMV/Ug//Mld"
FT CDS 437. .1207
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JEA8"
FT /gene="BV1"
FT /product="BV1"
FT /protein_id="AAF42740.1"
FT /translation="MYSIRKQARNFQRKWNSNTTNRYPIRRKYVAGHTRPCVRRRLSYE
FT PVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSADGRSRDYIKLQSMSVSGV
FT IHAKANGNDDPMEVSPVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGPYSACYVNLR
FT LLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDGDLVNAGGNY
FT RNISKNAILVSYAFVSEHAMSCKPFVQIETSYVG"
FT CDS complement(1216. .2112)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JEA7"
FT /gene="BC1"
FT /product="BC1"
FT /protein_id="AAF42741.1"
FT /translation="MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRIM
FT GKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYFSA
FT SYFSIDDNVPWQLLYKVEDSNVKHGITFAQIKAKLKLSAAKHSTDIKFKQPTIKILSKD
FT YGPDCVDFWSVGKPKPIRRLIQNDPGTDYDTGPKYRPITVQPGETWATKSTIGRSTSMR
FT YTSPKPIDFDASSSKQYASEAEFPLRGLHQLPEASLDPGDSISQTQSMSKKDIESIIEQ
FT TVNKCLIAHRGSSHKDL"
XX
SQ Sequence 2720 BP; 766 A; 478 C; 615 G; 861 T; 0 other;
AF126801 Length: 2720 March 18, 2003 10:54 Type: N Check: 3618 ..
1 accggttggc cccgccccct ttaaaatgtg ggccccgcgc actggttggc
51 ctcatctccc tttgaaaatg ggtcccccac cgttttctct ttcctgcaga
101 tatgacggtg ggccccgcat gcagatgttg tcagctatgg atattgcatg
151 tgtgtcccac atgcatataa atgatcggcg ggcctatcga atgacagcgt
201 gtgctactaa attatattta gtatattgtt catggctctg agtttaataa
251 aaggatatat tttatttaac ttttaatatt agccattcga tattagtgat
301 ttatagtcgt caatctgaca acgaccatga aggacaatta aggcgagtag
351 cgtaattgtg tatgtattat atatagggtt ctaacataca ggagtatgag
401 aatagcattt atccgaatta tatacattaa gttgtaatgt atagtatcag
451 gaagcaggct agaaatttcc aaaggaaatg gaacagcaat accactaaca
501 ggtatccaat caggcgtaag tatgttgccg ggcatactag accatgtgtt
551 aggcgaagat tgtcatatga gccagtggag agaccgttgg tccataatgt
601 tttgtgtgag aagcaacatg gtgacgtgtt taatttgcag cagaacacaa
651 gttacacgtc atttgtgacg tatccttcta ggggaccatc tgctgatggg
701 cgtagtaggg attacatcaa gttgcaaagt atgtctgtct cgggagtgat
751 acatgcgaag gctaatggca atgatgatcc tatggaggtg tctcctgtgg
801 ttaatggagt gttcgtgttt agcttaataa tggatacaaa gccttattta
851 cctgctggtg ttcaagctct tcctacattt gaagagctgt tcggaccata
901 ttccgcttgt tacgtgaatt taagattatt gaataatcaa caacatcgat
951 atagggtatt gcacagcgtg aaacgtttcg tgtcatcgtc aggagatact
1001 aaggtatctc aatttaggtt taataagcga ttgagcacca ggcgatatac
1051 tatttgggca tcattccatg atggggatct ggtaaatgca ggtggaaatt
1101 ataggaacat aagcaagaat gctattcttg tcagttatgc ttttgtatca
1151 gagcatgcaa tgtcttgtaa accatttgta caaatagaaa catcctatgt
1201 gggatgattt attattcata aatctttatg gctactgcct ctatgtgcta
1251 ttaagcactt gtttacagtt tgttctataa tgctttcaat gtcctttttc
1301 gacatggact gggtttgtga aattgagtcc cctggatcta gggaagcttc
1351 aggtagctgg tgtagccctc taagtgggaa ttctgcctca gaggcatact
1401 gcttggagga ggaggcgtcg aagtcaattg gttttgggct tgtgtatctc
1451 atgcttgtag agcgcccaat tgtggatttt gtagcccatg tttcccctgg
1501 ttggaccgtg atgggcctat atttaggccc agtgtcataa tcggtgccgg
1551 gatcattctg aatgagcctt cgaatgggct taggttttcc aacggaccag
1601 aagtcgacac agtcaggccc atagtctttg gatagtattt ttatagtggg
1651 ctgtttaaat ttaatgtctg ttgagtgttt ggcagctgac agcttcagtt
1701 ttgccttaat ttgggcaaat gtgattccat gctttacgtt tgagtcttca
1751 accttatata gcagctgcca tggtacgtta tcatcaattg aaaagtatga
1801 tgcagagaaa taatggaggt ccacattaca ccctatggga aatgtgaatt
1851 gggcttgatc ctgttgctca tcgctgagcc tagtgtctct aatggtaacg
1901 ataacagaac cttgtgcatt aaagggcact tgattcctgt actcaataac
1951 gacatggtct accttcatgc atttgcccat gatacgtacc cttgttcgtt
2001 caagggtcga aggaaattga agtgtaatcg gcgattcatc attcgtcaat
2051 ttgtattctg ttcttgcgga ttgaatatag tcgctggata tgacaggtac
2101 agatgtatcc atgtgcaaca atttgagtag aagcttgtca aagccacaac
2151 acctgtctca tgagaaacat gattaatcta ttgttaaact ggccgcgcag
2201 cgggatggct tgaattcaag ataaatcaga agattttgtc aacaggataa
2251 acatagtgtc gaaatataga catatatttc taatcctatc ggaataacgc
2301 ttctatgtgt aatccaattc aaacatatat atatgtatac acattagtcg
2351 atgaaacatt atatatttat gtaccttata ataacttgaa ttggaaatcc
2401 gttggagtgg aatgtggata gtcttattat caaagtggtc atataaatat
2451 gttttatata tttattaagg agttatccaa cgagtgatag tttacgttgt
2501 tagatttgca tgttcaaatc taaaataagc aattacactg tagtgagaga
2551 aagttagaga gagacgctct caattggaga cacacttgag catctcctcc
2601 tgttaattgg agacattata tagttgtctc taaagggcat tattgtaata
2651 tgtggaactt taattcgaat taaaaggctc aaaaggctca gaacacccaa
2701 ggggccaacc gtataatatt