Sequence of DPV East African cassava mosaic virus
East African cassava mosaic virus-Uganda3 Mild DNA-B strain EACMV/Ug3//Mld BV1 (BV1) and BC1 (BC1) genes, complete cds.
ACC No: AF126805
Dated: 2003-03-10 | Length: 2776 | CRC: 107720574
!!NA_SEQUENCE 1.0
ID AF126805 standard; DNA; VRL; 2776 BP.
XX
AC AF126805;
XX
SV AF126805.1
XX
DT 15-MAR-2000 (Rel. 63, Created)
DT 10-MAR-2003 (Rel. 75, Last updated, Version 3)
XX
DE East African cassava mosaic virus-Uganda3 Mild DNA-B strain EACMV/Ug3//Mld
DE BV1 (BV1) and BC1 (BC1) genes, complete cds.
XX
KW .
XX
OS East African cassava mosaic virus-Uganda3 Mild
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC East African cassava mosaic virus.
XX
RN [1]
RP 1-2776
RX MEDLINE; 21103006.
RX PUBMED; 11172108.
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S.,
RA Fauquet C.M.;
RT "Recombination, pseudorecombination and synergism of geminiviruses are
RT determinant keys to the epidemic of severe cassava mosaic disease in
RT Uganda";
RL J. Gen. Virol. 82(Pt 3):655-665(2001).
XX
RN [2]
RP 1-2776
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S., Beachy R.N.,
RA Fauquet C.M.;
RT ;
RL Submitted (09-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Cell Biology, The Scripps Research Institute, 10550 Torrey Pines Road, La
RL Jolla, CA 92037, USA
XX
DR SPTREMBL; Q9JE98; Q9JE98.
DR SPTREMBL; Q9JE99; Q9JE99.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2776
FT /chromosome="DNA-B"
FT /country="Uganda"
FT /db_xref="taxon:223273"
FT /organism="East African cassava mosaic virus-Uganda3 Mild"
FT /strain="EACMV/Ug3//Mld"
FT CDS 358. .1134
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JE99"
FT /gene="BV1"
FT /product="BV1"
FT /protein_id="AAF42751.1"
FT /translation="MYSVYRRGYKTPYRSPYGARVTPYVYRKTAGKQTSKSRVPRKLAY
FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS
FT GTVNVSQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM
FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVENSSTGG
FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG"
FT CDS complement(1263. .2186)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JE98"
FT /gene="BC1"
FT /product="BC1"
FT /protein_id="AAF42752.1"
FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK
FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS
FT TYFSLSEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG
FT YTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSSSG
FT PARLDHFRSQSMRLDPSTTPTDLDNDSTEYPYQRLHRLHTPDLDPGDSVSQTPSDSVSR
FT KDLETLLESTINKCLIKIKSEAPRQL"
XX
SQ Sequence 2776 BP; 771 A; 452 C; 763 G; 790 T; 0 other;
AF126805 Length: 2776 March 18, 2003 10:54 Type: N Check: 5731 ..
1 accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccccac
51 gcactaagta atgtcagcca atcatgttca atactggaag acgcggtagt
101 tacgtatgga tgagtaagtg gtcccgacgc acgaatgttg acaggcaatt
151 ggatggctat gtgtgtatca tattcatata ggtgtgttac tggttaatct
201 aaagttaggt gatggggcct atcataaaaa cgcaatacat aggtacgtat
251 gtacatattg attatatttg tgtctgcgga tatatgatcc gccacgtgta
301 taatggatat ggaatgtcct ataaatattt ggcatgtctc ccgtccgtta
351 atgcaagatg tattctgttt acaggcgtgg gtataagact ccgtatagga
401 gtccgtatgg cgctcgtgta acaccatatg tttatcgtaa gacggctggt
451 aaacagacgt ctaaatctcg tgtaccgcga aagttggcgt atgaatcgcc
501 aaaatgtcta tatacgcgac gctcattgga ggatatccat aatggggctt
551 ccttaaagtt gcctcaacag ggggattata cgtcctacgt gacactccca
601 tgtcgaggta tcgatggtaa tgggggtagg tctgttgatc atataaaatt
651 attaagcttg agggtgtctg ggactgtcaa cgtcagtcaa tgcggtggtg
701 atgataatat gggagagaga acgaccatga ggggtatttt tttcatggct
751 tgtcttgttg ataagaaacc tttcgttcca gagggggtta gtatattgcc
801 gacgtttaat gagttgttcg gggaatatga atccgtgtat ggcatgccta
851 ggttgaagga aaacgttcgt caccggtatc gcgtgattgg gacgtcgaaa
901 ttatatataa cgaccgatga agagcacatc cagaagccat ttagtctacg
951 tcgaagacta agtggaggga aatatcctat gtggtcgtcg ttcaaggatg
1001 tggagaatag tagtacaggt gggaactata aaaatataaa taagaacgct
1051 atactagtta gttatgtgtg ggtatcgcta tgtcggtcca cgtgtgatgt
1101 gtattcgcag tttgtactta attacgtcgg ttgataataa aacgagataa
1151 gtgtgttgac attaattatg tttgaactaa cgaaatatga gatgaacatc
1201 aacggaaagc acatatagtg ttattatgta gcgaagcaaa tatcgtacat
1251 atcaagtgtt tattacaatt gcctgggtgc ttcggatttt attttgatga
1301 gacacttgtt tatggtactc tcaagcagtg tctcgaggtc ctttctggat
1351 acggagtcgg atggggtctg tgataccgag tcccctgggt ccaagtcggg
1401 tgtgtgtaat ctgtgtagtc tctggtaagg atattctgtg gagtcgttgt
1451 ctaagtccgt tggtgttgtc gatgggtcca gtctcatgga ctgtgaacga
1501 aagtggtcca gccttgctgg gccggatgag ctgggtagcc caatctgaga
1551 cttcgtggcc caggtttctc cagggagaat ggtgatgggc ctgtgggtta
1601 tgggtcgttg actatgagca tgtggagttg gatttagtaa tctccgtcgt
1651 gtttctcctt tttccacgga ccagaagtct atgcaatcct ttgtgtagcc
1701 cttggataat atgttaattg ttgggggttt gaaacgtatg tccgtggaat
1751 gtttggccga tgataatcgg agcttggcct tgatggatgc gaatttcacg
1801 ccttctatga cgtttgagtc ttcgactctg tacatgattc tccaagggga
1851 gggttctgaa agcgaaaaat atgtagacga gaagtagtgg aggtctacgt
1901 tgcaagctat tgggaaagtg aatgctgctt gagcagcgtc ttcaaggctg
1951 acgcgattgt ctctgatttc tacgataacc gacccaattg cgttaaatgg
2001 gacctggttg cggtattcaa ttataatgtg gtcgattttc atacatcggc
2051 ctttgagtcg catggtagcc tgctcgaatg agctcgggaa ttggagattg
2101 attggtgcag catcgttggt taatgcgtac tctgtgcgtt tgctgttgat
2151 gtaattattg tctgtgacgg tgaattggtt gtccattcta tgaatgaaaa
2201 aaacaagggt tagtaaacgg agagaagaga tgtataaaag tcagagcaag
2251 tttataaaat gtcttgtata catggaagca tatatgcatt gggtatcgat
2301 aataacacac taaagcagaa caaggatcat atatgtataa ctggccgcgc
2351 agcggattgg aagtcagaca aatcggcgaa caaataaaaa agtcgaatga
2401 ggttatggga ttgaatcaac ttacggaagc acctaggaag cagtcgggag
2451 tgaattcttg ttagaagtgg agaaaacaaa gaaataaaag ttaacgaaat
2501 aaaagtataa cggattggga tagaaaggaa agtgagcaga tgatatgcgc
2551 cgtgtcgtta aatgagatgt tattgggtgt ttatataggc gttaataagc
2601 gagacgtggt agagagagaa agaagagaga ggcgagagca atcgggggac
2651 actcaaagtc tgtagcaatc gggggaaagg ggggcaattt atatgatgcc
2701 ccctaaatgg catttatgta atatcctcat ggaatgtgaa aggcaaacgt
2751 ggaaaggcgg ccatccgtat aatatt