Sequence of DPV East African cassava mosaic virus
East African cassava mosaic virus-Uganda3 Severe DNA-B strain EACMV/Ug3//Svr BV1 (BV1) and BC1 (BC1) genes, complete cds.
ACC No: AF126807
Dated: 2003-03-10 | Length: 2777 | CRC: 1122254043
!!NA_SEQUENCE 1.0
ID AF126807 standard; DNA; VRL; 2777 BP.
XX
AC AF126807;
XX
SV AF126807.1
XX
DT 15-MAR-2000 (Rel. 63, Created)
DT 10-MAR-2003 (Rel. 75, Last updated, Version 3)
XX
DE East African cassava mosaic virus-Uganda3 Severe DNA-B strain
DE EACMV/Ug3//Svr BV1 (BV1) and BC1 (BC1) genes, complete cds.
XX
KW .
XX
OS East African cassava mosaic virus-Uganda3 Severe
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC East African cassava mosaic virus.
XX
RN [1]
RP 1-2777
RX MEDLINE; 21103006.
RX PUBMED; 11172108.
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S.,
RA Fauquet C.M.;
RT "Recombination, pseudorecombination and synergism of geminiviruses are
RT determinant keys to the epidemic of severe cassava mosaic disease in
RT Uganda";
RL J. Gen. Virol. 82(Pt 3):655-665(2001).
XX
RN [2]
RP 1-2777
RA Pita J.S., Fondong V.N., Sangare A., Otim-Nape G.W., Ogwal S., Beachy R.N.,
RA Fauquet C.M.;
RT ;
RL Submitted (09-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Cell Biology, The Scripps Research Institute, 10550 Torrey Pines Road, La
RL Jolla, CA 92037, USA
XX
DR SPTREMBL; Q9JE96; Q9JE96.
DR SPTREMBL; Q9JE97; Q9JE97.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2777
FT /chromosome="DNA-B"
FT /country="Uganda"
FT /db_xref="taxon:223274"
FT /organism="East African cassava mosaic virus-Uganda3
FT Severe"
FT /strain="EACMV/Ug3//Svr"
FT CDS 358. .1134
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JE97"
FT /gene="BV1"
FT /product="BV1"
FT /protein_id="AAF42755.1"
FT /translation="MYSVYRRGYKTPYRSSYGARVTPYVYRKTAGKQTSKSRVPRKLAY
FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS
FT GTVNISQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM
FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG
FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG"
FT CDS complement(1264. .2187)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9JE96"
FT /gene="BC1"
FT /product="BC1"
FT /protein_id="AAF42756.1"
FT /translation="MDNQFTVTDKNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK
FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS
FT TYFSLSEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG
FT YTKDCIDFWSVEKGETRRRLLNPTPHANSQRPITHRPITILPGETWATKSQIGLPSSSG
FT PARLDHFRSQSMRMGPSTTTTDFDNDSTEYPYQTLHRLHTPELDPGDSVSQTPSDSVSR
FT KDLETLLESTINKCLIKIKSEAPRQL"
XX
SQ Sequence 2777 BP; 772 A; 448 C; 757 G; 800 T; 0 other;
AF126807 Length: 2777 March 18, 2003 10:54 Type: N Check: 944 ..
1 accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccccac
51 gcactaagta atgtcagcca atcatgtgca agactggaag acgcggtagt
101 tacgtattga tgagtaagtg gtcccgacgc actaatgttg acaggcaatt
151 ggattgctat gtgtgtatca tattcatata ggtgtgttac tggttaatct
201 aaagttaggt gatggggcct atcataaaaa cgcaatacat aggtacgtat
251 gtacatattg attatatttt tgtttgcgga tatatgatcc gccacgtgta
301 taatggatat ggaatgtcct ataaatattt ggcatgtctc ccgtccgtta
351 atgcaagatg tattctgttt acaggcgtgg gtataagacg ccgtatagga
401 gttcgtatgg cgctcgtgta acaccatatg tttatcgtaa gacggctggt
451 aaacagacgt ctaaatctcg tgtaccgcga aagttggcgt atgaatcgcc
501 aaaatgtcta tatacgcgac gctcattgga ggatatccat aatggggctt
551 ccttaaagtt gcctcaacag ggggattata cgtcctacgt gacactccca
601 tgtcgaggta tcgatggtaa tgggggtagg tctgttgatc atataaaatt
651 attaagcttg agggtgtctg ggaccgtcaa tatcagtcaa tgcggtggtg
701 atgataatat gggagagaga acgaccatga ggggtatttt tttcatggct
751 tgtcttgttg ataagaaacc tttcgttcca gagggggtta gtatattgcc
801 gacgtttaat gagttgttcg gggaatatga atccgtgtat ggcatgccta
851 ggttgaagga aaacgttcgt caccgttatc gcgtgattgg gacgtcgaaa
901 ttatatataa cgaccgatga agagcacatc cagaagccat ttagtctacg
951 tcgaagacta agtggaggga aatatcctat gtggtcgtcg ttcaaggatg
1001 tggataatag tagtacaggt gggaactata aaaatataaa taagaacgct
1051 atactagtta gttatgtgtg ggtatcgcta tgtcggtcca cgtgtgatgt
1101 gtattcccag tttgtactta attacgtcgg ttgataataa aacgagataa
1151 gtgtgttgac attaattatg tttgaacgaa cgaaatatga gatgaacatc
1201 aatggaacgc acatatagtg ttattatgta agcgaatcaa atatcgtata
1251 tatcaagtgt ttattacaat tgcctgggtg cttcggattt tattttgatg
1301 agacacttgt ttatggtact ctcaagcagt gtctcgaggt cctttcggga
1351 tactgagtcg gatggggtct gtgataccga gtcccctggg tccaattcgg
1401 gtgtgtgtaa tctgtgtagt gtctggtaag gatattctgt ggagtcgttg
1451 tcgaagtccg ttgtggttgt cgatgggccc attctcatgg actgtgaacg
1501 aaagtggtcc agccttgctg ggccggatga gctgggtagc ccaatttgag
1551 acttcgtggc ccatgtttct ccagggagaa tggtgatggg cctgtgggtt
1601 atgggtcgtt gactattagc atgtggagtt ggatttagta atctccgtcg
1651 tgtttctcct ttttccacgg accagaagtc tatgcaatcc tttgtgtagc
1701 ccttggataa tatgttaatt gttgggggtt tgaaacgtat gtccgtggaa
1751 tgtttggccg atgataatcg gagcttggcc ttgatggatg cgaatttcac
1801 gccttctatg acgtttgagt cttcgactct gtacatgatt ctccaagggg
1851 agggttctga aagcgaaaaa tatgtagacg agaagtagtg gaggtctacg
1901 ttgcaagcta ttgggaaagt gaatgctgct tgagcagcgt cttcaaggct
1951 gacgcgattg tctctgattt ctacgataac cgacccaatt gcgttaaatg
2001 ggacctggtt tcggtattca attataatgt ggtcgatttt catacatcgg
2051 cctttgagtc gcatggtagc ctgctcgaat gagctcggga attggagatt
2101 gattggtgca gcatcgttgg ttaatgcgta ctctgtgcgt ttgctgttga
2151 tgtaattctt gtctgtgacg gtgaattggt tgtccattct atgaatgaaa
2201 aaaacaaggg ttagtaaacg gagagaagag atgtataaaa gtcagagcaa
2251 gtttataaaa tgtcttgtat acatggaagc atatatgcat tgggtagcga
2301 taataacaca ctaaagcaga acaaggatca tatatgtata attggccgcg
2351 cagcggattg gaagtcagac aaatcggcga acaaataaaa aagtcgaatg
2401 atgttatggg atggaaacaa cgtacggaag cacctaggaa gcagtcggga
2451 gtgaattctt gttagaagtg gagaaaacaa agaaataaaa gttaacgaaa
2501 taaaagtatg acggattggt agagaaagga aagtgagcag atgatatgcg
2551 ccgtgtcgtt aaatgagatg ttattgggtg tttatatagg cgttaataag
2601 cgagacgtgg tagagagaga aagaagagag aggcgagagc aatcggggga
2651 cactcaaagt ctgtagcaat cgggggaaag gggggcaatt tatatgatgt
2701 cccctaaatg gcatttatgt aatatcctca atgaatgtga aaggcaaacg
2751 tggaaaggcg gccatccgta taatatt