Sequence of DPV Pepper leaf curl virus
Pepper leaf curl virus, complete genome.
ACC No: AF134484
Dated: 2005-04-15 | Length: 2744 | CRC: -2107478418
!!NA_SEQUENCE 1.0
ID AF134484 standard; circular genomic DNA; VRL; 2744 BP.
XX
AC AF134484;
XX
SV AF134484.2
XX
DT 02-AUG-1999 (Rel. 60, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Pepper leaf curl virus, complete genome.
XX
KW .
XX
OS Pepper leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2744
RA Chiemsombat P., Warin N., Attathom S., Chatchawankarnpanich O.;
RT ;
RL Submitted (11-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Kasetsart University, Malai-man, Kamphaengsaen, Nakorn
RL Pathom 73140, Thailand
XX
RN [2]
RC Sequence update by submitter
RP 1-2744
RA Chiemsombat P., Warin N., Attathom S., Chatchawankarnpanich O.;
RT ;
RL Submitted (14-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Kasetsart University, Malai-man, Kamphaengsaen, Nakorn
RL Pathom 73140, Thailand
XX
CC On Oct 14, 1999 this sequence version replaced gi:5669869.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /db_xref="taxon:83839"
FT /mol_type="genomic DNA"
FT /organism="Pepper leaf curl virus"
FT CDS 174. .485
FT /codon_start=1
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q9PY64"
FT /product="AV2 precoat protein"
FT /protein_id="AAF02097.1"
FT /translation="MVLRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEAS
FT RRYSHFHSRLQGASPFELRQPICQPCCCPYCPRHKQKEVMGQPDHVQKAQDIQDVQKP"
FT CDS 295. .1065
FT /codon_start=1
FT /db_xref="GOA:Q9PY63"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q9PY63"
FT /product="AV1 coat protein"
FT /protein_id="AAF02096.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW
FT ANRTMYRKPRIYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH
FT RVGKGPVIKSVYVWGRIWMDEISSQESHQSVMFFLVRDRRPFGTPQDFGQVFNMYDNEP
FT STATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNH
FT TENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1062. .1475)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q9PY62"
FT /product="AC3 protein"
FT /protein_id="AAF02100.1"
FT /translation="MDSRTGAHHTAAQAAQAENGVYIWTVNNPLYFRITQHHERPFLRN
FT HDIITVQIQFNYNLRKAGGLHQCFLICQIWTRLHPQTSRFLRVFKYQCIKYLDHLGVIS
FT INNVIRAIRHVLYNVLEGTIDARLSEMIKFNIY"
FT CDS complement(1207. .1620)
FT /codon_start=1
FT /db_xref="GOA:Q9PY61"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q9PY61"
FT /product="AC2 trap protein"
FT /protein_id="AAF02099.1"
FT /translation="MQSSSPSKAHSSQVPIKVRHRIAKKTTRRRRVDLPCGCSYFVALG
FT CHPHGFTHRGTSHCSSSSSSREWRIYLDGQQSPIFQNNTTPREAVPEEPRHNHGANPVQ
FT LQPEESGGTTPMLSNLPNLDSFTSSDLAFLKSI"
FT CDS complement(1538. .2602)
FT /codon_start=1
FT /db_xref="GOA:Q9PY60"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9PY60"
FT /product="AC1 replicase-associated protein"
FT /protein_id="AAF02098.1"
FT /translation="MAPPKNLRINAKNYFLTYPHCSLTKEEALSQIQAIETPTIKLFIR
FT ICRELHEDGTPHLHILIQFEGKFQCKNPRFFDLTSPTRSAHFHPNIQGAKSSTDVKEYI
FT AKNGDVLDHGVFQIDGRSARGGCQSANDAYAEALNSGTKASALAILKEEAPKDYILQFH
FT NLNSNLDKIFSLRIEMYISPFLVSFDQVQRNLNEWVAANVVKPARPLRPISIVVEGDSR
FT TGKTMWARSLGPHNYLCGHLDLSPKVYNNDPWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT NTKYGKPVQIKGGIPTIFLCNPGPHSSYKEFLEEEKNTALKNWALKNAIFVTIEGPLFS
FT GSHQGATQNRQEDN"
FT CDS complement(2152. .2445)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q9PY59"
FT /product="AC4 protein"
FT /protein_id="AAF02101.1"
FT /translation="MGLLTCISSSNSKVNSNAKIHDSSTSHPQPGQHISIRTFRELKAQ
FT QMSKNISQKTETFLIMGFSRSMEDRLEGVANLPTTHMPRHSIQEPKLRHSQF"
XX
SQ Sequence 2744 BP; 723 A; 573 C; 622 G; 826 T; 0 other;
AF134484 Length: 2744 April 19, 2005 08:54 Type: N Check: 8571 ..
1 accggatggc cgcgattttt tttcaagtgg tccccccgcg tgcgctggac
51 caatcataac catccctcaa agcttgcatg cctgcaggtt atcccatcaa
101 aacgtggtcc ccaagtactt acatcaaaac atgtgggatc ctttactaaa
151 cgaagtttcc tgaaaaccgt aacatggttt taaggtgtat gttagcaatt
201 aagtatttgc aactagtaga gaatacatac tctcctgata cattaggcta
251 cgacctaata cgtgatctca tcttggttat tcgtgctagg gattatgtcg
301 aagcgtcccg cagatatagt catttccact cccgcctcca aggtgcgtcg
351 ccgtttgaac ttcgacagcc catatgtcag ccgtgctgct gcccctactg
401 tcctcgtcac aaacaaaagg aggtcatggg ccaaccggac catgtacaga
451 aagcccagga tatacaggat gtacaaaagc cctgatgttc ctcggggctg
501 tgaaggccca tgtaaggtcc agtcctatga acaacgtcat gatgtagccc
551 atgtagggaa ggtaatttgt gtgtcagatg tcactcgagg taatgggctg
601 acacaccgtg ttggtaaagg tcctgtaatc aagtctgttt acgtatgggg
651 aagaatttgg atggatgaga tatcaagcca agaatcacac caatctgtca
701 tgtttttttt agttcgggat aggagaccat ttggtactcc acaggacttc
751 ggtcaggtgt tcaacatgta tgataatgag cccagtactg cgacggtgaa
801 aaacgataac agagatcgat ttcaagtcct tcgtcgtttc caggcaactg
851 tgacaggtgg gcaatatgca agcaaggagc aagccatagt taggaaattc
901 atgaaggtga acaatcatgt gacttacaac catcaagaag ctgcgaagta
951 tgacaatcac acagagaatg cgcttttatt gtatatggca tgtacgcatg
1001 ccagtaatcc agtgtatgca actttgaaga tcagaatcta cttctacgac
1051 tctgtacaaa attaataaat attgaatttt atcatttctg aaagacgagc
1101 atcaatggtg ccctccaata cattgtacaa tacatgtcta atcgccctaa
1151 ttacattgtt tatactaatc actcctaaat ggtctaaata cttgatacat
1201 tgatatttaa atactcttaa gaaacgcgag gtctgaggat gtaaacgagt
1251 ccaaatttgg cagattagaa agcattggtg tagtcccccc gctttcctca
1301 ggttgtagtt gaactggatt tgcaccgtga ttatgtcgtg gttcctcagg
1351 aacggcctct cgtggtgttg tgttattctg aaatataggg gattgttgac
1401 cgtccagata tatacgccat tctctgcttg agctgcttga gctgcagtgt
1451 gatgtgcccc tgtgcgtgaa tccatgagga tggcaaccta gagcgacgaa
1501 atatgaacac ccacaaggga gatcaactcg tcttcgtcta gttgtcttct
1551 tggcgattct gtgtcgcacc ttgatgggaa cctgagaaga gtgggccttc
1601 gatggtgacg aagattgcat tctttagagc ccaattttta agtgcggtgt
1651 tcttttcctc ttccaagaac tctttatagc ttgaatgtgg tcctggattg
1701 cagaggaaga tagtgggaat tccgccttta atttgaactg gctttccgta
1751 ctttgtgttg ctttgccagt ctctttgggc ccccatgaat tctttaaaat
1801 gctttaagta atgcggatcg acgtcatcaa tgacgttata ccaagggtcg
1851 ttgttgtaca cttttgggct taagtctaaa tgaccacata aatagttatg
1901 tggtcctaac gacctggccc acattgtttt ccccgtcctg ctatcaccct
1951 ctaccactat acttatcggt cttaatggcc gcgcaggctt gacaacgttt
2001 gcagcaaccc attcatttaa gttcctctgg acttggtcaa atgagaccaa
2051 aaagggggaa atgtacattt ctattcggag gctaaaaatc ttatctaaat
2101 tactatttaa attatggaat tgtaaaatat aatcttttgg ggcctcttct
2151 ttcaaaattg cgagtgccga agctttggtt cctgaattga gtgcctcggc
2201 atatgcgtcg ttggcagatt ggcaaccccc tcgagccgat cttccatcga
2251 tctggaaaac cccatgatca agaacgtctc cgttttttgc gatatattct
2301 ttgacatctg ttgagctttt agctccctga atgttcggat ggaaatgtgc
2351 tgacctggtt ggggatgtga ggtcgaagaa tcgtggattt ttgcattgga
2401 atttaccttc gaattggatg aggatatgca agtgaggagt cccatcttcg
2451 tgcaattccc tgcaaatcct gataaatagt ttaattgtag gggtttctat
2501 ggcttggatt tgggaaagtg cttcttcttt agtgagagag caatgtgggt
2551 atgtgaggaa atagtttttc gcatttattc ttaaattttt aggaggagcc
2601 attgaccggt caatcggtgt ctctcaactc tctcctatgt aattggtgtc
2651 tggggtctta tttatatgga gacccaatgg cattattgta attatggaaa
2701 agtactttaa ttcaaatacc caaagcggcc atccgtataa tatt